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CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The most recent updates can be found on our curation site or by clicking the Most Recent Data option in the menu below.


         Recommended Genes


Most recent data | Six months | One year | All time

New or updated genes since one year ago. The cutoff date is December 10th, 2017

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
2 days agocptk1 chloroplast thymidine kinase1: Mutants have aberrant chloroplast DNA metabolism. Alice Barkan, 2011
 
GRMZM2G048821
Le Ret, M et al. 2018. Plant Physiol 178:1643-1656     Reference: December 8th, 2018
Variation: October 11th, 2018
Gene Model: September 6th, 2011
2 days agoemp12 empty pericarp12: mutant severely arrests embryo and endosperm development, causing embryo lethality
 
GRMZM2G023071
Sun, F et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery432     Reference: December 8th, 2018
Gene Product: December 27th, 2016
Variation: December 8th, 2018
Gene Model: December 8th, 2018
3 days agolrs1 liguleless related sequence1: bzip90 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.07
AC232238.2_FG004
Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024     Reference: December 7th, 2018
Gene Product: August 21st, 2018
Variation: August 22nd, 2014
Gene Model: August 22nd, 2014
Recommended by Ed Coe:
January 8th, 2008
3 days agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
   Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024     Reference: December 7th, 2018
Gene Product: December 18th, 2014
Variation: November 8th, 2007
3 days agolg2 liguleless2: like lg1, less extreme
3.06
   Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024     Reference: December 7th, 2018
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
3 days agoos1 opaque-endosperm, small germ1: opaque crown; kernel larger, lighter color; viable; reduced oil content
2.00 - 2.04
   Song, WB et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12755     Reference: December 7th, 2018
Gene Product: June 15th, 2018
Variation: December 6th, 2018
3 days agooy1 oil yellow1: seedling oily greenish-yellow; viable; fails to convert protoporphyrin IX to Mg-protoporphyrin; oy1-t tinged green; oy1-1039, oy1-1040 lethal; Oy1-700 dominant yellow-green; gene product confirmed by transgenic expression and genetic mapping.
10.02
   Khangura, RS et al. 2018. G3 pp.doi: 10.1534/g3.118.200798     Reference: December 7th, 2018
Gene Product: June 8th, 2007
Variation: March 17th, 2011
3 days agomrp1 Myb related protein1: transforms aleurone cells into endosperm transfer cells and required to maintain transfer cell phenotype
8.05
   Song, WB et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12755     Reference: December 7th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 days agopmk1 Phosphomevalonate kinase1:
1.03
GRMZM2G019260
Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024     Reference: December 7th, 2018
Variation: March 9th, 2016
Gene Model: September 20th, 2016
3 days agodrl2 drooping leaf2: mutant enhances the phenotype of ifa1 mutants (a.k.a. drl1)
9.06
GRMZM2G102218
Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: December 7th, 2018
Gene Product: October 16th, 2015
Variation: July 12th, 2017
Gene Model: October 16th, 2015
3 days agoifa1 indeterminate floral apex1: mutants have perturbed floral and inflorescence meristems as well as droopy leaves with increased angle
 
GRMZM2G088309
Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: December 7th, 2018
Gene Product: October 16th, 2015
Variation: July 13th, 2017
Gene Model: October 16th, 2015
3 days agobrs1 brassinosteroid synthesis1:
1.03
GRMZM2G065635
Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024   AT3G50660 (TAIR) Reference: December 7th, 2018
Gene Product: September 20th, 2010
Variation: November 7th, 2013
Gene Model: October 3rd, 2012
6 days agoms33 male sterile33:
2.09
GRMZM2G070304
Zhang, L et al. 2018. BMC Plant Biology pp.doi: 10.1186/s12870-018-1543-7   LOC_Os11g45400 (MSU/TIGR) Reference: December 4th, 2018
Gene Product: March 17th, 2018
Variation: December 4th, 2018
Gene Model: March 17th, 2018
6 days agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Boehlein, SK et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01849     Reference: December 4th, 2018
Gene Product: November 4th, 2014
Variation: December 4th, 2018
6 days agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Boehlein, SK et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01849     Reference: December 4th, 2018
Gene Product: November 4th, 2014
Variation: October 10th, 2014
8 days agogshs2 glutathione synthetase2:
3.05
GRMZM2G155974
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: December 2nd, 2018
Variation: September 25th, 2007
Gene Model: December 1st, 2018
8 days agogshs1 glutathione synthetase1:
 
GRMZM2G437004
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: December 2nd, 2018
Gene Model: December 1st, 2018
9 days agots6 tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement.
1.11
GRMZM5G862109
Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007     Reference: December 1st, 2018
Gene Product: February 27th, 2017
Variation: December 4th, 2013
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
9 days agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
GRMZM2G307119
Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007   At5g18560 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os07g0669500 (Gramene)
Reference: December 1st, 2018
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
9 days agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
GRMZM2G005624
Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007     Reference: December 1st, 2018
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
9 days agora2 ramosa2: tassel many-branched, upright, not conical like ra1; irregular kernel placement
3.03 - 3.03
AC233943.1_FG002
Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007   AT5G63090 (TAIR)
LOC_Os01g07480 (MSU/TIGR)
Os01g0169400 (Gramene)
Reference: December 1st, 2018
Gene Product: July 27th, 2009
Variation: September 19th, 2009
Gene Model: July 14th, 2011
9 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007     Reference: December 1st, 2018
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
9 days agotru1 tassels replace upper ears1: upper ear branches tassel-like, tillers bear ears
3.04 - 3.10
GRMZM2G039867
Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007     Reference: December 1st, 2018
Gene Product: December 17th, 2013
Variation: December 18th, 2013
Gene Model: December 17th, 2013
9 days agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
GRMZM2G101511
Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007     Reference: December 1st, 2018
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
9 days agosfp1 sulfate permease1:
1.02
GRMZM2G159632
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: April 20th, 2018
Gene Model: February 3rd, 2015
9 days agoso1 sulfite oxidase1:
1.06
GRMZM2G114739
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: April 16th, 2013
Gene Model: April 16th, 2013
9 days agoaprl2 adenosine 5'-phosphosulfate reductase-like2:
2.07
GRMZM2G087254
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
9 days agosfp4 sulfate transporter4:
 
GRMZM2G154211
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
9 days agocys3 cysteine synthase3:
 
GRMZM2G003289
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
9 days agosqd1 sulfolipid biosynthesis1:
 
GRMZM2G053322
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: December 1st, 2018
Gene Model: December 1st, 2018
9 days agocys4 cysteine synthase4:
 
GRMZM2G003289
    Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
9 days agocys5 cysteine synthase5:
 
GRMZM2G443985
    Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
9 days agocys7 cysteine synthase7:
 
GRMZM2G104237
    Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
9 days agocys6 cysteine synthase6:
9.02
GRMZM2G104269
    Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
9 days agosir1 sulfite reductase1:
 
GRMZM2G090338
Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: September 1st, 2003
Variation: January 26th, 2011
Gene Model: July 28th, 2016
10 days agobx4 benzoxazinone synthesis4: endoplasmic reticulum P450 monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; NAM SNP PHM1184
4.01
GRMZM2G172491
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
10 days agopbf1 prolamin-box binding factor1: endosperm cDNA, SSR umc1065
2.06
   Jin, X et al. 2018. New Phytol pp.doi: 10.1111/nph.15614     Reference: November 30th, 2018
Gene Product: September 1st, 2003
Variation: April 20th, 2005
10 days agobx5 benzoxazinone synthesis5: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1276.
4.01
GRMZM2G063756
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
10 days agobx2 benzoxazinone synthesis2: endoplasmic reticulum P450 monoxygenase; synthesis cyclic hyroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1164, umc1682
4.01
GRMZM2G085661
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: April 8th, 2013
Variation: October 27th, 2011
Gene Model: October 24th, 2011
10 days agohyd3 hydroxylase3: beta-carotene hydroxylase
 
GRMZM2G152135
Jin, X et al. 2018. New Phytol pp.doi: 10.1111/nph.15614     Reference: November 30th, 2018
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
10 days agocyp13 cytochrome P450 13: encodes CYP97A
 
GRMZM5G837869
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: April 8th, 2013
Variation: July 8th, 2017
Gene Model: April 8th, 2013
10 days agocyp26 cytochrome P-450 26:
 
GRMZM2G087875
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: February 26th, 2018
Gene Model: November 30th, 2018
10 days agocyp12 cytochrome P450 12:
2.06
GRMZM2G091588
Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: September 26th, 2016
Variation: January 22nd, 2010
Gene Model: April 30th, 2013
11 days agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Guo, L et al. 2018. Curr Biol 28:3005-3015     Reference: November 29th, 2018
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
11 days agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Guo, L et al. 2018. Curr Biol 28:3005-3015     Reference: November 29th, 2018
Gene Product: September 1st, 2003
Variation: April 15th, 2008
11 days agoatp10 ATP synthase10: specifically lacks the plastid ATP synthase; mutants block translation of atpB (cp)and atpA (cp)
 
   Zoschke, R et al. 2013. Plant Cell 25:2265-2275     Reference: February 17th, 2015
Variation: November 29th, 2018
13 days agoatg12 autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development.
 
GRMZM5G842517
McLoughlin, F et al. 2018. Nature Plants pp.doi: 10.1038/s41477-018-0299-2     Reference: November 27th, 2018
Variation: August 15th, 2017
Gene Model: August 15th, 2017
14 days agofl1 floury endosperm1: (was o4) endosperm opaque, soft; dosage effect with fl1-ref allele, but o4 allele is recessive
2.04
GRMZM2G094532
Vanous, A et al. 2018. Plant Genome 12:170114     Reference: November 26th, 2018
Gene Product: July 8th, 2013
Variation: September 16th, 2010
Gene Model: July 8th, 2013
14 days agoo10 opaque endosperm10: like o1
 
GRMZM2G346263
Vanous, A et al. 2018. Plant Genome 12:170114     Reference: November 26th, 2018
Gene Product: August 20th, 2016
Variation: August 20th, 2016
Gene Model: August 20th, 2016
14 days agoemp16 empty pericarp16: mutant homozyous kernels have empty pericarp and are non-viable.
 
GRMZM2G060516
Vanous, A et al. 2018. Plant Genome 12:170114     Reference: November 26th, 2018
Gene Product: December 27th, 2016
Variation: January 16th, 2016
Gene Model: January 16th, 2016
17 days agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
   Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: April 21st, 2016
Variation: June 6th, 2016
17 days agohggt1 homogentisate geranylgeranyl transferase1: vitamin E synthesis; contributes to variation in levels of tocotrienol (Lipka et al 2013)member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
GRMZM2G173358
Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: January 8th, 2018
Gene Model: June 26th, 2013
17 days agosxd1 sucrose export defective1: vitamin E synthesis; anthocyanin accumulates in a non-clonal pattern at tip and margins of leaves soon after emergence from whorl; reduced plant height
5.04
   Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: December 1st, 2012
Variation: August 7th, 2012
17 days agopap19 purple acid phosphatase19: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.03
GRMZM2G152447
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap20 purple acid phosphatase20: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.03
GRMZM2G152477
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap22 purple acid phosphatase22: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.08
GRMZM2G174549
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap31 purple acid phosphatase31: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
2.07
GRMZM5G868679
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agoelm2 elongated mesocotyl2: mutant like elm1; encodes heme oxygenase
 
GRMZM2G101004
Zhang, H et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01520     Reference: November 23rd, 2018
Gene Product: September 24th, 2014
Variation: September 24th, 2014
Gene Model: November 18th, 2013
17 days agopap4 purple acid phosphatase4: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
AC202435.3_FG003
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap5 purple acid phosphatase5: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
AC207043.3_FG004
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap6 purple acid phosphatase6: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G007754
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap7 purple acid phosphatase7: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G073860
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap8 purple acid phosphatase8: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G077466
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap9 purple acid phosphatase9: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G096363
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap10 purple acid phosphatase10: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM5G826216
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap11 purple acid phosphatase11: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G106600
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap12 purple acid phosphatase12: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G109071
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap14 purple acid phosphatase14: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G111425
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap16 purple acid phosphatase16: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G138698
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap17 purple acid phosphatase17: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G138756
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap18 purple acid phosphatase18: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G141584
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap21 purple acid phosphatase21: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G157027
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap24 purple acid phosphatase24: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G326625
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap26 purple acid phosphatase26: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G366607
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap27 purple acid phosphatase27: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G386998
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap29 purple acid phosphatase29: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G434170
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap30 purple acid phosphatase30: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM5G831009
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agopap32 purple acid phosphatase32: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM5G881649
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
17 days agovte4 vitamin E synthesis4:
5.06
GRMZM2G035213
Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: June 26th, 2013
Gene Model: June 26th, 2013
17 days agopap13 purple acid phosphatase13: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
7.03
GRMZM2G109405
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
19 days agoacp1 acid phosphatase1: electrophoretic mobility; cytosolic; dimericencodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
9.03
AC211394.4_FG004
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2016
19 days agopap25 purple acid phosphatase25: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
   Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
19 days agopap28 purple acid phosphatase28: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
   Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
19 days agoumc2224  :
1.01
GRMZM2G076062
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Variation: February 1st, 2017
Gene Model: April 28th, 2016
19 days agopap15 purple acid phosphatase15: similar to Arabidopsis purple acid phosphatase 27encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.06
GRMZM2G136453
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: June 21st, 2017
19 days agopht1 phosphate transporter protein1:
5.03
GRMZM2G326707
Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
19 days agopht2 phosphate transporter protein2:
1.08
GRMZM2G154090
Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
19 days agomecs2 methyl erythritol cyclodiphosphate synthase2:
 
AC209374.4_FG002
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
19 days agopht9 phosphate transporter protein9:
 
GRMZM2G070087
Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
19 days agonc1 Na+ content1: loss-of-function allele confers increased accumulation of Na+ in leaves, and salt hypersensitivity.
 
GRMZM2G047616
Li, PC et al. 2018. Planta pp.doi: 10.1007/s00425-018-3043-2     Reference: November 21st, 2018
Gene Product: November 15th, 2017
Variation: November 15th, 2017
Gene Model: November 15th, 2017
19 days agopap1 purple acid phosphatase1: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G093101
Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
19 days agopap23 purple acid phosphatase23: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G315848
Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
19 days agospx1 SPX domain-containing membrane protein1: involved in Pi transport from roots to shoots
 
GRMZM2G166976
Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
19 days agopap2 purple acid phosphatase2: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G134054
Dionisio, G et al. 2011. Plant Physiol 156:1087-110     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
19 days agopap3 purple acid phosphatase3: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
GRMZM2G014193
Dionisio, G et al. 2011. Plant Physiol 156:1087-110     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
20 days agoad1 adherent1: seedling leaves, tassel branches, and occasionally top leaves adhere
1.08
   Kempton, JH. 1921. USDA Bull 925:1-28     Reference: September 1st, 2003
Variation: November 20th, 2018
20 days agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Li, Y-J et al. 2018. Ann Bot pp.doi: 10.1093/aob/mcy123     Reference: July 4th, 2018
Gene Product: July 4th, 2018
Variation: November 20th, 2018
21 days agomac1 multiple archesporial cells1: (was lar*-487) several archesporial cells undergo normal meiosis; plants partially female sterile but completely male sterileBeware: this locus could accidentally be confused with the act1 (actin 1) locus, which also was called MAc1 in past publications!
10.03
GRMZM2G027522
van der Linde, K et al. 2018. Plant Signal Behav pp.doi: 10.1080/15592324.201     Reference: November 19th, 2018
Gene Product: August 2nd, 2012
Variation: August 10th, 2012
Gene Model: July 26th, 2012
Recommended by Chung-Ju Rachel Wang:
December 19th, 2013
21 days agosh6 shrunken pale green6: shrunken, opaque, normal size kernel, like sh1; pale green virescent seedling that greens slowly and is usually lethal
7.00 - 7.02
   Neuffer, MG. 1992. MNL 66:39     Reference: September 1st, 2003
Variation: November 19th, 2018
25 days agoeps1 enolpyruvylshikimate phosphate synthase1: unpubl sequence
9.07
GRMZM5G877500
Dong, YX et al. 2018. J Biol Chem pp.doi: 10.1074/jbc.RA118.006134     Reference: November 15th, 2018
Gene Product: September 1st, 2003
Variation: November 15th, 2018
Gene Model: July 27th, 2016
27 days agodek19 defective kernel19: collapsed opaque endosperm; lethal; cultured embryos green
6.01 - 6.08
GRMZM2G111984
Dong, JQ et al. 2018. Plant J pp.doi: 10.1111/tpj.14153     Reference: November 13th, 2018
Gene Product: December 27th, 2016
Variation: November 13th, 2018
Gene Model: November 13th, 2018
27 days agodek33 defective kernel33: opaque, floury, dented, wrinkled kernel with floury endosperm; occasionally viviparous
5.04 - 5.05
GRMZM2G090068
Dong, JQ et al. 2018. Plant J pp.doi: 10.1111/tpj.14153     Reference: November 13th, 2018
Gene Product: November 13th, 2018
Variation: November 13th, 2018
Gene Model: November 13th, 2018
27 days agomet2 DNA methyl transferase2:
10.06
GRMZM2G025592
Stoddard, CI et al. 2018. Mol Cell pp.doi: 10.1016/j.molcel.2018.10.006     Reference: November 13th, 2018
Gene Product: April 6th, 2018
Variation: November 13th, 2018
Gene Model: November 16th, 2011
28 days agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jones, T et al. 2018. Methods in Molecular Biology 1864:81-93   LOC_Os1g67410 (MSU/TIGR) Reference: November 12th, 2018
Gene Product: February 27th, 2017
28 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jones, T et al. 2018. Methods in Molecular Biology 1864:81-93     Reference: November 12th, 2018
Gene Product: August 25th, 2017
28 days agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G101958
Jones, T et al. 2018. Methods in Molecular Biology 1864:81-93     Reference: November 12th, 2018
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 12th, 2015
28 days agoein2 ethylene insensitive 2: elevated expression co-segregated with a decreased smilaside A : smiglaside C ratio, which is important for maize seedling root defense against Fusarium graminearum
3.01
GRMZM2G068217
Zhou, S et al. 2018. New Phytol pp.doi: 10.1111/nph.15520   AT5G03280 (TAIR) Reference: November 12th, 2018
Variation: November 12th, 2018
Gene Model: March 1st, 2015
30 days agod8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
GRMZM2G144744
Schaefer, RJ et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00299     Reference: November 10th, 2018
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
30 days agod9 dwarf plant9: dominant D9 plants semidwarf with broad, dark green leaves; andromonoecious, not responsive to gibberellins; possible duplicate locus of d8
5.01
   Schaefer, RJ et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00299     Reference: November 10th, 2018
Gene Product: February 12th, 2007
Variation: January 30th, 2014
30 days agoppp1 pyrophosphate-energized proton pump1: endosperm and leaf cDNA's 5C02E08 (uaz280),csu220; single copy; similar to plant vacuolar pyrophosphate-energized ATPase
5.07
   Schaefer, RJ et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00299     Reference: November 10th, 2018
Gene Product: September 1st, 2003
Variation: December 14th, 2014
30 days agochr113 chromatin complex subunit A:
9.02
GRMZM2G409865
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
30 days agochr119 chromatin complex subunit A 119: phd31 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.07
GRMZM2G181158
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: November 10th, 2018
30 days agochr118 chromatin complex subunit A:
6.07
GRMZM2G168096
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
30 days agochr125a chromatin complex subunit A 125a:
9.04
GRMZM2G007922
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
30 days agochr125b chromatin complex subunit A:
1.04
GRMZM2G469162
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
30 days agochr126a chromatin complex subunit A 126a:
8.03
AC235535.1_FG001
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
30 days agochr126b chromatin complex subunit A 126b:
3.04
GRMZM2G015277
    Variation: September 1st, 2003
Gene Model: November 10th, 2018
30 days agocpps3 copalyl diphosphate synthase3: Functions as a (+)-CPP synthase
 
GRMZM2G068808
Murphy, KM et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01542     Reference: November 10th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
30 days agocpps4 copalyl diphosphate synthase4: Produces 8,13-CPP and LPP; moderately inducible expression under root exposure to abiotic stress
 
AC218998.2_FG011
Murphy, KM et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01542     Reference: November 10th, 2018
Gene Product: August 16th, 2012
Gene Model: November 9th, 2018
31 days agochr109a chromatin complex subunit A: alf6 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.03
GRMZM2G115424
Zhou, W et al. 2016. Genes Genom pp.DOI: 10.1007/s13258-016-0491-6     Reference: November 16th, 2016
Variation: September 1st, 2003
Gene Model: November 9th, 2018
31 days agochr12 chromatin complex subunit A 12:
2.08
GRMZM2G102625
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Variation: September 1st, 2003
Gene Model: November 9th, 2018
33 days agolhy1 late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010)
10.03
GRMZM2G175265
Ko, DK, et al. 2016. PLoS Genetics. 12:e1006197     Reference: October 3rd, 2016
Gene Product: July 31st, 2016
Variation: December 28th, 2016
Gene Model: November 7th, 2018
33 days agoaat1 anthocyanin acyltransferase1: mutants exhibit reduced anthocyanin acylation
 
GRMZM2G387394
Paulsmeyer, MN et al. 2018. G3 8:3669-3678     Reference: November 7th, 2018
Gene Product: September 28th, 2018
Variation: October 1st, 2018
Gene Model: September 28th, 2018
36 days agochr101 chromatin complex subunit A 101: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
2.10
   Long, J-C et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12733     Reference: November 4th, 2018
Variation: June 9th, 2018
36 days agochr106 chromatin complex subunit A 106: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
1.10
GRMZM2G071025
Long, J-C et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12733     Reference: November 4th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
38 days agocoi1 coronatine insensitive1: jasmonate signal receptor gene family member
3.06
GRMZM2G125411
An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
38 days agocoi2 coronatine insensitive2: jasmonate signal receptor gene family member
 
GRMZM2G151536
An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
38 days agocoi3 coronatine insensitive3: jasmonate signal receptor gene family member
 
GRMZM2G353209
An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
38 days agocoi4 coronatine insensitive4: does not transgenically restore male fertility and defense response in Arabidopsis mutant coi1-1
 
GRMZM2G079112
An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
39 days agogl4 glossy4: (was gl16) like gl1, but surface wax has reduced number of star-type particles
4.06
GRMZM2G003501
Liu, S et al. 2009. Genetics 183:1215-1225     Reference: November 1st, 2018
Gene Product: November 1st, 2018
Variation: November 1st, 2018
Gene Model: October 31st, 2018
39 days agogl4b 3-ketoacyl-CoA synthase gl4b: predicted to encode a 480-amino-acid protein; exhibits 96% identity with gl4a
 
GRMZM2G478140
Liu, S et al. 2009. Genetics 183:1215-1225     Reference: November 1st, 2018
Gene Product: November 1st, 2018
Gene Model: November 1st, 2018
40 days agogl14 glossy14: like gl1; expressed late (gl24 allelic)
2.05 - 2.05
GRMZM5G806387
Zheng, J et al. 2018. Plant J pp.doi: 10.1111/tpj.14140     Reference: October 31st, 2018
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: October 31st, 2018
40 days agogl26 glossy26: like gl1similar to Arabidopsis enoyl reductase
8.02
GRMZM2G481843
Zheng, J et al. 2018. Plant J pp.doi: 10.1111/tpj.14140     Reference: October 31st, 2018
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: September 17th, 2018
40 days agocer8 eceriferum8: mutant seedlings displayed a typical glossy phenotype
10.03
GRMZM2G101875
Zheng, J et al. 2018. Plant J pp.doi: 10.1111/tpj.14140   AT2G47240 (TAIR) Reference: October 31st, 2018
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: January 23rd, 2018
41 days agoarftf9 ARF-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
   Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: September 25th, 2007
41 days agoarftf25 ARF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.06
GRMZM2G116557
Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: August 22nd, 2017
Gene Model: August 22nd, 2017
41 days agoarftf18 ARF-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
GRMZM2G035405
Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: September 1st, 2003
Gene Model: June 23rd, 2018
41 days agoarftf23 ARF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: July 7th, 2017
41 days agonc2 Na+ content2:
 
GRMZM2G135674
Jiang, ZL et al. 2018. Frontiers Plant Sci 9:1485     Reference: October 30th, 2018
Gene Product: November 15th, 2017
Gene Model: November 15th, 2017
41 days agoauxrp1 auxin-regulated protein1: involved in stalk-rot disease resistance; encodes an auxin-regulated protein with a single DUF966 domain
 
GRMZM2G063298
Ye, JR et al. 2018. Molecular Plant pp.doi: 10.1016/j.molp.2018.10.005     Reference: October 30th, 2018
Variation: October 30th, 2018
Gene Model: October 30th, 2018
45 days agocg1 corngrass1: semidominant Cg1 plants have narrow leaves, extreme tilleringCg1 encodes two tandem miR156 genes that are overexpressed in the meristem and lateral organs. George Chuck, 2007
3.02
GRMZM2G022489
Ligaba-Osena, A et al. 2018. Int J Genomics doi; 10.1155/2018/8581258     Reference: October 26th, 2018
Gene Product: June 17th, 2016
Variation: August 25th, 2011
Gene Model: April 5th, 2013
Recommended by George Chuck:
September 25th, 2007
47 days agobnlg1677  :
10.07
GRMZM5G898792
    Variation: September 1st, 2003
Gene Model: October 24th, 2018
47 days agoufg75b  :
10.07
GRMZM2G120136
    Variation: October 24th, 2018
Gene Model: October 24th, 2018
48 days agolc1 red leaf color1: dominant Lc1 confers anthocyanin in coleoptile, nodes, auricle, leaf blade, etc. (compare Sn1 and Hopi1); displaced r1 gene
10.06
GRMZM5G822829
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 23rd, 2018
48 days agorel2 ramosa1 enhancer locus2: rel2 mutants dramatically increase the formation of long branches in ears of both ra1 and ra2 mutants
10.03
   Liu, X et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00913     Reference: October 23rd, 2018
Gene Product: October 23rd, 2018
Variation: October 23rd, 2018
48 days agoumc1477  :
10.04 - 10.06
GRMZM2G016477
    Variation: September 1st, 2003
Gene Model: October 23rd, 2018
48 days agolug3 leunig-related3:
1.12
GRMZM2G036169
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
48 days agolug5 leunig-related5:
3.04
   Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Variation: September 25th, 2007
48 days agoans2 anthranilate synthase component II homolog2:
 
GRMZM2G171383
    Variation: October 23rd, 2018
Gene Model: October 22nd, 2013
48 days agotpl1 topless-related1:
 
GRMZM2G316967
Liu, X et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00913     Reference: October 23rd, 2018
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
48 days agotpl2 topless-related2:
 
GRMZM2G030422
Liu, X et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00913     Reference: October 23rd, 2018
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
48 days agolug1 leunig-related1:
 
GRMZM2G361398
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
48 days agolug4 leunig-related4:
 
GRMZM2G097640
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
48 days agolug6 leunig-related6:
 
GRMZM2G149708
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
48 days agolug7 leunig-related7:
 
GRMZM2G111247
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
48 days agolug8 leunig-related8:
 
GRMZM2G061186
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
48 days agoans3 anthranilate synthase component II homolog2: anthranilate synthase homolog
 
GRMZM2G049892
    Gene Product: October 23rd, 2013
Gene Model: October 23rd, 2018
48 days agolug2 leunig-related2:
5.08
GRMZM2G079013
Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
48 days agorelk3 rel2-like3:
9.06
GRMZM2G550865
Liu, X et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00913     Reference: October 23rd, 2018
Gene Product: October 23rd, 2018
Gene Model: October 23rd, 2018
49 days agobnlg1074  :
10.04
GRMZM5G828581
    Variation: September 1st, 2003
Gene Model: October 22nd, 2018
49 days agonpi445a  : Previous results indicated this probe mapped to chromosome 5 near the centromere.
10.03
GRMZM2G304010
Shattuck-Eidens, DM et al. 1990. Genetics 126:207-217     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 22nd, 2018
49 days agoemp5 empty pericarp5: encodes a mitochondrion-targeted DYW subgroup pentatricopeptide repeat (PPR) protein; mutant has empty pericarp phenotype
 
GRMZM2G060536
Zheng, P et al. 2018. Plant Growth Regulation pp.doi:10.1007/s10725-018-0447-8     Reference: October 22nd, 2018
Gene Product: December 27th, 2016
Variation: March 12th, 2013
Gene Model: March 11th, 2013
50 days agoumc1345  :
10.03
GRMZM2G073077
    Variation: September 1st, 2003
Gene Model: October 21st, 2018
50 days agohb17 Homeobox-transcription factor 17: similar to Arbidopsis homeobox-leucine zipper protein MERISTEM L1Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.03
GRMZM2G118063
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 21st, 2018
50 days agoctb1 chitinase B1: cDNA sequence corresponds to protein sequence of maize chitinase B
10.04
GRMZM2G005633
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 21st, 2018
50 days agobnl3.04  :
10.00
GRMZM2G427014
Hong, K et al. 1993. Mol Gen Genet 239:115-121     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 21st, 2018
50 days agonlp9 NLP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04
GRMZM2G105004
Wang, ZK et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12696     Reference: January 25th, 2018
Variation: July 29th, 2004
Gene Model: October 21st, 2018
51 days agod1 dwarf plant1: andromonoecious, short, compact plants; responds to gibberellins; d1-t intermediate in height
3.03
GRMZM2G036340
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 25th, 2014
Variation: October 30th, 2014
Gene Model: October 2nd, 2012
51 days agola1 lazy plant1: prostrate growth habit
4.03 - 4.04
GRMZM2G135019
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 9th, 2013
Variation: February 26th, 2015
Gene Model: October 8th, 2013
51 days agomyb21 MYB-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: July 25th, 2017
51 days agotps3 terpene synthase3:
 
GRMZM2G064406
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
51 days agoggps3 geranylgeranyl pyrophosphate synthase3: part of multigene family encoding geranylgeranyl diphosphate synthase
 
GRMZM2G058404
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
51 days agod11 dwarf11: dominant mutant that appears to inhibit GA biosynthesis.
 
   Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Variation: June 18th, 2013
51 days agoks2 kaurene synthase2:
 
GRMZM2G093526
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
51 days agoga20ox5 gibberellin 20-oxidase5:
 
GRMZM2G049418
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 28th, 2014
Variation: July 6th, 2017
Gene Model: October 29th, 2014
51 days agoga2ox4 gibberellin 2-oxidase4:
 
GRMZM2G153359
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
51 days agoga2ox7 gibberellin 2-oxidase7:
 
GRMZM2G427618
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
51 days agoga2ox8 gibberellin 2-oxidase8:
 
GRMZM2G155686
Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
53 days agoscro1 scarecrow1: mRNA expressed in endodermis and quiescent center of root, influencing radial pattern
4.08
GRMZM2G131516
Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: August 26th, 2015
Variation: November 12th, 2012
Gene Model: November 11th, 2012
Recommended by Ed Coe:
January 25th, 2007
53 days agoisr1 inhibitor of striate1: (a.k.a. Ej1), dominant Isr1 plants have reduced expression of sr2 and other leaf-striping factors
10.06
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: September 1st, 2003
53 days agokn1 knotted1: dominant Kn1 plants have localized proliferation of tissue at vascular bundles on leaf
1.10
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: December 6th, 2013
53 days agotan1 tangled1: (was py1) leaves short, pointed, fine white streaks; displays abnormally oriented cell divisions and altered growth and development throughout the plant
6.05
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: June 29th, 2005
53 days agors1 rough sheath1: shoot meristem and developing stem specific; dominant Rs1 plants have extreme ligule disorganization (aka kn2)
7.00
GRMZM2G028041
Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: September 30th, 2015
Variation: November 18th, 2013
Gene Model: September 30th, 2015
53 days agors2 rough sheath2: short, zigzag plants with warty, distorted sheaths and leaves
1.05
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: September 1st, 2003
Variation: May 9th, 2009
53 days agosr2 striate leaves2: white stripes on blade and sheath of upper leaves
10.07
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: September 1st, 2003
53 days agogras58 GRAS-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Kranz anatomy; SHR/SCR signaling
 
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: August 26th, 2015
Variation: April 9th, 2014
53 days agorgd2 ragged seedling2: mutant expression is variable from reduced midrib/moderately narrow leaf to filamentous or even radial leaves
1.04
GRMZM5G852170
Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: August 12th, 2016
Variation: July 6th, 2010
Gene Model: August 17th, 2017
53 days agocsld1 cellulose synthase-like D1: participates in cell wall polysaccharides formation during cell division; mutants have narrow leaves
 
GRMZM2G015886
Li, W et al. 2018. BMC Plant Biology 18:239     Reference: October 18th, 2018
Gene Product: October 7th, 2016
Variation: October 18th, 2018
Gene Model: October 18th, 2018
53 days agopve1 puncate vascular expression1: PVE1 may function downstream of RGD2 in a pathway that intersects and interacts with the ta-siARF pathway (Zhang et al 2012)
5.03
AC211276.4_FG008
Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: June 16th, 2012
Gene Model: June 15th, 2012
54 days agozar8 Zea mays ARGOS8: Over-expression can lead to improved drought tolerance
 
GRMZM2G354338
Shi, JR et al. 2018. Plant J pp.doi: 10.1111/tpj.14131     Reference: October 17th, 2018
Gene Product: August 3rd, 2015
Gene Model: August 1st, 2015
54 days agortl3 reversion-to-ethylene sensitivity1 like3: Over-expression reduces ethylene responses
 
GRMZM2G121208
Shi, JR et al. 2018. Plant J pp.doi: 10.1111/tpj.14131     Reference: October 17th, 2018
Variation: June 10th, 2016
Gene Model: June 10th, 2016
54 days agoxyl1 xylanase1: Encodes an endoxylanase synthesized by a tapetum mRNA; predominant protein on the surface of maize pollen
 
GRMZM2G170839
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: October 17th, 2018
Gene Model: October 15th, 2018
56 days agobnlg1129  :
9.08
GRMZM2G168760
    Variation: September 1st, 2003
Gene Model: October 15th, 2018
56 days agoxyl2 xylanase2: encoded by one or few genes.
9.06
GRMZM5G850567
Suen, D; Huang, A. 2007. J Biol Chem 282:625-636     Reference: March 4th, 2009
Gene Product: September 1st, 2003
Gene Model: October 15th, 2018
56 days agoras18B1 ras related protein11B1:
 
AC149818.2_FG001
    Variation: January 25th, 2011
Gene Model: October 15th, 2018
57 days agoabi43 ABI3-VP1-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.07
GRMZM2G028794
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 14th, 2018
57 days agoumc1060  : similar to Arabidopsis RHO guanyl-nucleotide exchange factor 11
5.04
GRMZM2G346133
    Variation: September 1st, 2003
Gene Model: October 14th, 2018
58 days agoglk34 G2-like-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.03
GRMZM2G081671
Xu, YJ et al. 2018. Plant Cell Rep pp.doi: 10.1007/s00299-018-2262-0     Reference: February 2nd, 2018
Variation: September 1st, 2003
Gene Model: October 13th, 2018
58 days agooec2 oxygen evolving complex2:
2.03
GRMZM2G021617
Ettinger, WF; Theg, SM. 1992. Plant Physiol 99:791-793     Reference: July 18th, 2012
Variation: February 6th, 2015
Gene Model: October 13th, 2018
58 days agoras11D1 ras-related protein11D1: similar to Arabidopsis RAB GTPase homolog A1D
9.03
GRMZM2G018619
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: October 13th, 2018
Gene Model: October 13th, 2018
58 days agobnl5.04  :
9.03
GRMZM2G306915
Armstrong, CL et al. 1992. Theor Appl Genet 84:755-762     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 13th, 2018
59 days agodhn2 dehydrin2: polymorphic protein in embryos of some inbredssimilar to Arabidopsis dehydrin Rab18
9.03
GRMZM2G098750
Asghar, R; Fenton, RD; DeMason, DA; Close, TJ. 1994. Protoplasma 177:87-94     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: October 12th, 2018
59 days agohsk1 high-sulfur keratin homolog1: endosperm cDNA 5C04B04 (uaz144), similar to high-sulfur keratin; relation to uaz144a (bin 4.06) and uaz144b (bin 5.06) unclear
9.03
GRMZM5G844723
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 12th, 2018
60 days agobnlg2122  :
9.01
GRMZM2G124276
    Variation: October 11th, 2018
Gene Model: October 11th, 2018
61 days agonut1 necrotic upper tips1: Ac-tagged mutation, necrotic upper leaf tips and blasted tassel.
 
GRMZM2G041668
Dong, Zhaobin; et al. 2016. Maize Genetics Conference Abstracts. 58:P191   AT1G12260 (TAIR)
LOC_Os06g01480 (MSU/TIGR)
Reference: June 22nd, 2016
Gene Product: September 22nd, 2015
Variation: October 10th, 2018
Gene Model: November 15th, 2017
61 days agohnh1 HNH endonuclease domain-containing protein1: involved in degrading linear and circular DNA and participates in mitochondrial DNA regulation during pollen development
 
GRMZM2G074804
Ma, F et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.18.00754   AT1G18680 (TAIR) Reference: October 10th, 2018
Gene Product: October 10th, 2018
Gene Model: October 10th, 2018
61 days agostk1 serine threonine kinase1: mutants have reduced pollen transmission
9.02
   Fan, MX et al. 2018. Plant Biotechnol J pp.doi: 10.1111/pbi.12880     Reference: January 13th, 2018
Gene Product: May 13th, 2014
Variation: October 10th, 2018
62 days agocol11 C2C2-CO-like-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
2.04
GRMZM2G095598
Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
Variation: October 9th, 2018
Gene Model: June 18th, 2018
65 days agofl3 floury3: endosperm opaque, soft; dosage effect
8.03
GRMZM2G006585
Wang, JC et al. 2018. BMC Plant Biology pp.doi; 10.1186/s12870-018-1443-x     Reference: October 6th, 2018
Gene Product: September 7th, 2017
Variation: September 7th, 2017
Gene Model: September 7th, 2017
65 days agoplatz5 PLATZ-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G131280
Wang, JC et al. 2018. BMC Plant Biology pp.doi; 10.1186/s12870-018-1443-x     Reference: October 6th, 2018
Variation: February 16th, 2018
Gene Model: February 16th, 2018
65 days agowrky111 WRKY-transcription factor 111: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, C-T et al. 2018. Int J Mol Sci 19:3046     Reference: October 6th, 2018
Gene Product: July 24th, 2017
Variation: July 24th, 2017
66 days agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
GRMZM2G700665
Liang, YM et al. 2018. New Phytol pp.doi: 10.1111/nph.15512     Reference: October 5th, 2018
Gene Product: February 27th, 2017
Gene Model: November 20th, 2012
66 days agofbr1 few-branched1: dominant Fbr1 plants have tassel reduced to 0-3 branches; bract replaces next-to-bottom branch
 
   Dari, S et al. 2018. Maydica 63     Reference: October 5th, 2018
Variation: September 1st, 2003
66 days agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
   Liang, YM et al. 2018. New Phytol pp.doi: 10.1111/nph.15512     Reference: October 5th, 2018
Variation: October 5th, 2018
69 days agowrky70 WRKY-transcription factor 70: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G024898
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 2nd, 2018
69 days agoraf1 Rubisco Assembly Factor 1: Rubisco Accumulation Factor1; promotes Rubisco assembly. (A. Barkan, 2015)Encodes a previously unstudied protein that is conserved in the green lineage and localizes to bundle sheath chloroplasts
 
GRMZM2G457621
Salesse-Smith, CE et al. 2018. Nature Plants 4:802-810     Reference: October 2nd, 2018
Gene Product: October 4th, 2014
Variation: October 4th, 2014
Gene Model: October 4th, 2014
69 days agomrpa5 multidrug resistance-associated protein5:
 
GRMZM2G084181
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Variation: May 14th, 2011
Gene Model: October 2nd, 2018
69 days agoraf2 rubisco accumulation factor2: Rubisco Accumulation Factor2; promotes Rubisco assembly. (A. Barkan, 2015)mutant is seedling-lethal, Rubisco-deficient
 
GRMZM2G139123
Salesse-Smith, CE et al. 2018. Nature Plants 4:802-810     Reference: October 2nd, 2018
Gene Product: December 16th, 2015
Variation: October 4th, 2014
Gene Model: October 4th, 2014
71 days agonactf82 NAC-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhu, YH et al. 2018. Mol Breed 38:125     Reference: September 30th, 2018
Gene Product: September 22nd, 2015
Variation: September 30th, 2018
71 days agoms39 male sterile39: mutant is male sterile and also exhibits a shorter plant height and tassel length and decreased tassel branch number
 
GRMZM5G804976
Zhu, YH et al. 2018. Mol Breed 38:125     Reference: September 30th, 2018
Gene Product: September 5th, 2012
Variation: September 29th, 2018
Gene Model: September 28th, 2018
73 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Zhan, JP et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00392     Reference: September 28th, 2018
Gene Product: September 1st, 2003
Variation: June 6th, 2016
73 days agonkd2 naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
10.06
GRMZM5G884137
Zhan, JP et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00392     Reference: September 28th, 2018
Gene Product: January 3rd, 2015
Variation: December 21st, 2017
Gene Model: December 21st, 2017
73 days agonkd1 naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
 
GRMZM2G129261
Zhan, JP et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00392     Reference: September 28th, 2018
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
75 days agoms9 male sterile9: breakdown of pollen mother cellsLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
GRMZM2G006981
Albertsen, MC et al. 2014. pp.14/773465     Reference: September 26th, 2018
Gene Product: September 1st, 2003
Variation: July 18th, 2015
Gene Model: July 16th, 2015
76 days agodba2 DNA binding activity2: cDNA pAS12 has binding activity; gene specific
 
GRMZM2G070360
Davis, G et al. 1996. Maize Genetics Conference Abstracts 38     Reference: September 1st, 2003
Variation: September 25th, 2018
Gene Model: September 25th, 2018
77 days agosk1 silkless ears1: pistils abort, no silks
2.03 - 2.04
GRMZM2G021786
Zhao, Y et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01227   AT3G22250 (TAIR)
LOC_Os04g44354 (MSU/TIGR)
Reference: August 21st, 2018
Gene Product: September 24th, 2018
Variation: August 21st, 2018
Gene Model: October 31st, 2016
77 days agosm1 salmon silks1: silks salmon color with P1-rr and P1-wr, brown with P1-ww
6.05 - 6.05
GRMZM2G031311
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
77 days agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: June 4th, 2008
Variation: March 4th, 2017
77 days agophp20793  :
8.08
GRMZM2G166441
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 24th, 2018
Gene Model: September 2nd, 2018
77 days agowrky22 WRKY-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.09
GRMZM2G111354
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 24th, 2018
77 days agoglk101 G2-like-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
GRMZM2G064197
Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 1st, 2003
Gene Model: September 6th, 2018
77 days agocadtfr8 CCAAT-DR1-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.07
GRMZM5G866699
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 24th, 2018
77 days agoumc1005  :
8.08
GRMZM2G091121
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
77 days agosm2 salmon silk2: like sm1; silks salmon color with P1-rr and P1-wr, brown with P1-ww
2.07
GRMZM2G180283
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
77 days agoumc1268  :
8.07
GRMZM2G112912
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
77 days agoohp1 opaque2 heterodimerizing protein1: o2 heterodimerizing protein; one of two loci
1.11
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 1st, 2003
Variation: February 2nd, 2015
77 days agogrp1 glycine-rich protein1: protein with high glycine content and repetitive glycine stretches; putative cell wall components
1.08
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 1st, 2003
Variation: June 5th, 2014
77 days agoubf9 ubiquitin fusion protein9: genomic sequence, hybridizing mRNA expressed during cell division and/or cell growth; multiple copies in genome
 
GRMZM2G431821
Chen, K and Rubenstein, I. 1991. Gene 107:205-212     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 24th, 2018
77 days agoumc1607  :
8.07
GRMZM2G033330
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
77 days agobzip22 bZIP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422   AT1G43700 (TAIR) Reference: September 24th, 2018
Gene Product: August 21st, 2018
Variation: September 24th, 2018
77 days agotcptf29  : Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.09
GRMZM2G148022
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: November 2nd, 2014
Gene Model: September 24th, 2018
77 days agoumc1663  :
8.09
GRMZM2G160444
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
77 days agoumc1673  :
8.08
GRMZM2G139374
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
77 days agomybr51 MYB-related-transcription factor 51:
5.09
GRMZM5G811428
Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 1st, 2003
Gene Model: February 2nd, 2018
77 days agosbe3 starch branching enzyme3:
8.06
GRMZM2G005298
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: June 6th, 2011
Variation: June 1st, 2011
Gene Model: September 23rd, 2018
77 days agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 17th, 2010
Variation: September 16th, 2010
77 days agoAY110053  : similar to Arabidopsis protein kinase family protein
8.08
GRMZM2G139223
    Variation: July 29th, 2004
Gene Model: September 24th, 2018
77 days agoremo2 remorin2:
1.01
GRMZM2G137352
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 24th, 2018
Gene Model: September 24th, 2018
77 days agofnsi1 flavone synthase typeI1: Encodes a flavone synthase that is of the soluble Fe2+/2- oxoglutarate-dependent dioxygenase class
 
GRMZM2G099467
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865   AT5G24530 (TAIR) Reference: September 24th, 2018
Gene Product: August 15th, 2015
Variation: August 14th, 2015
Gene Model: August 14th, 2015
77 days agoremo1 remorin1:
 
GRMZM2G107774
Jamann, TM et al. 2016. Theor Appl Genet 129:591-602     Reference: February 29th, 2016
Gene Product: September 24th, 2018
Variation: February 6th, 2016
Gene Model: February 6th, 2016
77 days agougt1 UDP-glucosyl transferase1:
 
GRMZM2G162755
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: September 24th, 2018
Gene Model: May 6th, 2016
77 days agofns1 flavone synthase1:
 
GRMZM2G167336
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: September 20th, 2017
Gene Model: May 6th, 2016
77 days agocgt1 C-glucosyl transferase1:
 
GRMZM2G162783
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: September 24th, 2018
Gene Model: September 24th, 2018
77 days agoglk58 G2-like-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
6.06
GRMZM2G117854
Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 25th, 2007
Gene Model: February 2nd, 2018
77 days agocchh7 Cys2His2 Zinc Finger7:
7.01
GRMZM2G144645
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: April 4th, 2017
Gene Model: September 24th, 2018
77 days agoohp3 opaque2 heterodimerizing protein3:
8.05
GRMZM2G143469
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: August 21st, 2018
Gene Model: September 24th, 2018
78 days agobnlg1031  : similar to Arabidopsis 4,5-DOPA dioxygenase extradiol-like protein
8.06
GRMZM2G092817
    Variation: September 1st, 2003
Gene Model: September 23rd, 2018
78 days agoumc2356  :
8.06
GRMZM2G054341
    Variation: September 23rd, 2018
Gene Model: September 23rd, 2018
78 days agoAY109883  :
8.06
GRMZM2G312365
    Variation: July 29th, 2004
Gene Model: September 23rd, 2018
79 days agopgd3 phosphogluconate dehydrogenase3: single copy cDNA, csu843, similar to alfalfa enzyme; pentose phosphate pathway
4.03
GRMZM2G440208
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 1st, 2003
Variation: February 28th, 2013
Gene Model: July 28th, 2016
79 days agosod4 superoxide dismutase4: electrophoretic mobility; cytosolic; Cu-Zn dimeric; intralocus hybrid bands occur; two similar sequences X17564 (sod4), X17565(sod4A)
1.04
   Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: February 12th, 2007
Variation: April 20th, 2005
79 days agompk7 MAP kinase7:
 
GRMZM2G002100
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
79 days agoupb1 upbeat1: transcription factor with a bHLH domain; transcriptional regulation affected by nitrate
 
GRMZM2G040364
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839   AT2G47270 (TAIR) Reference: September 22nd, 2018
Gene Product: September 14th, 2016
Gene Model: September 22nd, 2018
79 days agomkk2 mitogen-activated protein kinase kinase2:
 
GRMZM2G400470
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839   AT4G29810 (TAIR) Reference: September 22nd, 2018
Gene Product: July 12th, 2013
Gene Model: September 22nd, 2018
79 days agoprx112 peroxidase112:
 
GRMZM2G033985
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
79 days agoprx39 peroxidase39:
 
GRMZM2G085967
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
79 days agoprx64 peroxidase64:
 
GRMZM2G076562
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
79 days agoss1 starch synthase I: single copy endosperm specific cDNA; encoded-protein cross-reacts with antibody to granule associated starch synthase I
9.02
   Xie, Y et al. 2018. Frontiers Plant Sci 9:1252     Reference: September 22nd, 2018
Gene Product: October 14th, 2016
Variation: October 7th, 2010
79 days agopgd4 phosphogluconate dehydrogenase4:
10.04
GRMZM2G177077
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 1st, 2003
Gene Model: September 22nd, 2018
81 days agobnlg1651  :
8.05
GRMZM2G020544
    Variation: September 1st, 2003
Gene Model: September 20th, 2018
81 days agodof5 C2C2-Dof-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
GRMZM5G880268
Chen, Y; Cao, J. 2014. Plant Mol Biol Rep pp.doi: 10.1007/s11105-014-0835-9     Reference: November 26th, 2014
Variation: September 20th, 2018
Gene Model: September 20th, 2018
81 days agoereb117 AP2-EREBP-transcription factor 117: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
GRMZM2G113078
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 20th, 2018
81 days agommt1 methionine S-methyltransferase1:
8.05
GRMZM2G098031
Bourgis, F. 1999. Plant Cell. 11:1485-1498     Reference: July 19th, 2004
Variation: September 20th, 2018
Gene Model: September 20th, 2018
82 days agobnlg1176a  :
8.05
GRMZM2G375222
    Variation: September 1st, 2003
Gene Model: September 19th, 2018
82 days agoumc1263  : similar to Arabidopsis BRCT domain-containing DNA repair protein
8.05
GRMZM2G372200
    Variation: September 1st, 2003
Gene Model: September 19th, 2018
82 days agoiaa38 Aux/IAA-transcription factor 38: similar to Arabidopsis auxin-responsive protein IAA27Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
GRMZM2G035465
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 19th, 2018
82 days agosweet3a sugars will eventually be exported transporter3a:
8.04
GRMZM2G179679
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: September 19th, 2018
82 days agoumc1959  :
8.05
GRMZM2G090963
    Variation: September 1st, 2003
Gene Model: September 19th, 2018
82 days agoumc1562  :
8.05
GRMZM2G059693
    Variation: September 19th, 2018
Gene Model: September 19th, 2018
82 days agocadtfr15 CCAAT-DR1-transcription factor 15: cDNA 5C05F12 similar to binding protein; single copyLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
GRMZM2G064426
Zhang, Z et al. 2016. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2016.08.020     Reference: August 8th, 2016
Gene Product: August 9th, 2016
Variation: September 1st, 2003
Gene Model: September 19th, 2018
82 days agoAY110056  : Protein trichome birefringence-like 25
8.04 - 8.04
GRMZM2G131152
    Variation: September 25th, 2007
Gene Model: September 19th, 2018
82 days agoras7B2 ras-related protein7B2:
 
GRMZM5G811797
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 19th, 2018
82 days agorps28 ribosomal protein S28: cDNA; SSR umc1741
 
GRMZM2G030293
Chevalier, C et al. 1996. Plant Sci 117:95-105     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 19th, 2018
Gene Model: September 18th, 2018
83 days agophi121  :
8.03
GRMZM2G136567
Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 18th, 2018
83 days agopro1 proline responding1: (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
8.04
GRMZM2G375504
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: March 19th, 2015
Variation: September 18th, 2018
Gene Model: June 22nd, 2014
83 days agobnlg1863  :
8.03
GRMZM2G022768
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
83 days agobnlg2082  :
8.03
GRMZM5G842965
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
83 days agoumc1157  :
8.03
GRMZM2G058913
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
83 days agoumc1415  :
8.03
GRMZM2G063676
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
83 days agoumc1470  :
8.03
GRMZM2G145573
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
83 days agoumc1735  :
8.03
GRMZM2G164090
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: September 18th, 2018
83 days agockx10 cytokinin oxidase10: Mapped the minor band to this site.
1.07
GRMZM2G348452
Smehilova, M; et al. 2009. J Exp Bot. 60:2701-12     Reference: March 25th, 2014
Gene Product: April 4th, 2014
Variation: September 1st, 2003
Gene Model: September 18th, 2018
83 days agoumc120a  :
8.03
GRMZM2G578572
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 18th, 2018
83 days agoAY110032  :
8.03
GRMZM2G102745
    Variation: July 29th, 2004
Gene Model: September 18th, 2018
83 days agoAY110450  : BRCA1/BRCA2-containing complex subunit 3
8.03
GRMZM2G152436
    Variation: July 29th, 2004
Gene Model: September 18th, 2018
83 days agompk3 MAP kinase3: transcript and protein activity upregulated by ABA and H2O2
1.03
GRMZM2G017792
Liu, JX et al. 2018. PLoS One 13:e0203612     Reference: September 18th, 2018
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013
84 days agobnlg2235  :
8.02
AC196470.3_FG007
    Variation: September 1st, 2003
Gene Model: September 17th, 2018
84 days agocko5 cytokinin oxidase 5:
8.03
GRMZM2G325612
Gu, R et al. 2010. J Plant Growth Reg 29:428-440     Reference: March 28th, 2014
Gene Product: April 4th, 2014
Variation: September 1st, 2003
Gene Model: September 17th, 2018
84 days agoumc1817  :
8.01
GRMZM2G049781
    Variation: September 1st, 2003
Gene Model: September 17th, 2018
84 days agoras7B1 ras-related protein7B1:
 
GRMZM2G058366
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 17th, 2018
85 days agobhlh19 bHLH-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.01 - 8.02
GRMZM2G066057
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 16th, 2018
85 days agoumc1304  :
8.02
GRMZM2G133552
    Variation: September 1st, 2003
Gene Model: September 16th, 2018
85 days agodxr2 deoxy xylulose reductoisomerase2:
8.01
GRMZM2G036290
Owens, BF, et al. 2014. Genetics. 198:1699-1716     Reference: January 1st, 2015
Gene Product: December 10th, 2011
Gene Model: September 16th, 2018
87 days agorf4 restorer of fertility4: dominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6
8.01 - 8.01
   Liu, YM et al. 2018. BMC Plant Biology 18:190     Reference: September 14th, 2018
Variation: September 1st, 2003
87 days agoumc1139  : similar to Arabidopsis ubiquitin-activating enzyme E1 C
8.01
GRMZM2G007915
    Variation: September 1st, 2003
Gene Model: September 14th, 2018
87 days agoumc1414  :
8.01
GRMZM2G020148
    Variation: September 1st, 2003
Gene Model: September 14th, 2018
87 days agoumc1483  :
8.01
GRMZM5G872442
    Variation: March 30th, 2007
Gene Model: September 14th, 2018
87 days agobnl13.05a  : B-A translocations indicate that the probe does not map to 4S, 8L, or 10L.
8.01
GRMZM2G041308
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 14th, 2018
88 days agophi116  : similar to Arabidopsis Nuclear transport factor 2 (NTF2) family protein
7.06
GRMZM2G056772
    Variation: September 1st, 2003
Gene Model: September 13th, 2018
88 days agoglk59 G2-like-transcription factor 59: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.05
AC155434.2_FG005
Xu, YJ et al. 2018. Plant Cell Rep pp.doi: 10.1007/s00299-018-2262-0     Reference: February 2nd, 2018
Variation: September 13th, 2018
Gene Model: February 2nd, 2018
88 days agoAY109703  :
7.06
GRMZM2G386824
    Variation: September 25th, 2007
Gene Model: September 13th, 2018
88 days agopht5 phosphate transporter protein5:
 
GRMZM2G041595
Liu, F et al. 2016. Int J Mol Sci 17:903     Reference: June 16th, 2016
Gene Product: June 16th, 2016
Gene Model: September 13th, 2018
89 days agophi069  :
7.05
GRMZM2G448739
Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 12th, 2018
89 days agolls1 lethal leaf spot1: chlorotic-necrotic lesions resembling Helminthosporium carbonum infection
1.01
   Sindhu, A et al. 2018. PLoS One 13:e0201359     Reference: September 12th, 2018
Gene Product: November 5th, 2014
Variation: September 12th, 2018
89 days agoo7 opaque endosperm7: like o1; high lysine content
10.07
GRMZM2G074759
Yang, J et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00266     Reference: September 12th, 2018
Gene Product: December 20th, 2011
Variation: February 20th, 2012
Gene Model: December 16th, 2011
89 days agobnlg2259  :
7.04
GRMZM2G037444
    Variation: September 1st, 2003
Gene Model: September 12th, 2018
89 days agoumc1029  :
7.04
GRMZM2G023346
    Variation: September 1st, 2003
Gene Model: September 12th, 2018
89 days agoumc1295a  :
7.04
GRMZM2G080567
    Variation: September 1st, 2003
Gene Model: September 12th, 2018
89 days agoumc1768  :
7.04
GRMZM2G351469
Baysdorfer, C. 1993. submission to dbEST, a nucleotide sequence database     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 12th, 2018
89 days agofdl1 fused leaves1: coleoptile-first or first-second leaves fused at epidermis, curly
7.04
GRMZM2G056407
La Rocca, N, et al. 2015. J Exp Bot. 0:doi:10.1093/jxb/erv278     Reference: June 23rd, 2015
Gene Product: September 1st, 2003
Variation: September 12th, 2018
Gene Model: September 12th, 2018
89 days agopht12 phosphate transporter protein12:
 
GRMZM2G041595
Liu, F et al. 2016. Int J Mol Sci 17:903     Reference: June 16th, 2016
Gene Product: June 16th, 2016
Gene Model: September 12th, 2018
89 days agoocd1 oxalyl-CoA decarboxylase1: Mutants have an opaque phenotype and caused dramatic alterations in the metabolome in the endosperm
 
GRMZM2G175171
Yang, J et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00266     Reference: September 12th, 2018
Gene Product: September 12th, 2018
Variation: September 12th, 2018
Gene Model: September 12th, 2018
89 days agoIDP363  :
2.05
GRMZM2G042981
    Variation: March 31st, 2005
Gene Model: September 12th, 2018
90 days agoumc1214  : similar to Arabidopsis nuclear transport factor 2 and RNA recognition motif domain-containing protein
7.04
GRMZM2G167932
    Variation: September 11th, 2018
Gene Model: September 11th, 2018
90 days agobnlg1666  :
7.04
GRMZM2G081949
    Variation: September 1st, 2003
Gene Model: September 11th, 2018
90 days agobnlg1805  :
7.03
GRMZM2G167591
    Variation: September 1st, 2003
Gene Model: September 11th, 2018
90 days agoippi1 isopentenyl pyrophosphate isomerase1: similar to Arabidopsis Isopentenyl-diphosphate Delta-isomerase IIpart of multigene family encoding isopentenyl pyrophosphate isomerase
7.03
GRMZM2G108285
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Variation: September 1st, 2003
Gene Model: September 11th, 2018
90 days agoumc1708  :
7.04
GRMZM2G131228
    Variation: September 1st, 2003
Gene Model: September 11th, 2018
90 days agoumc2332  :
7.04
GRMZM2G131243
    Variation: September 11th, 2018
Gene Model: September 11th, 2018
90 days agooec17 oxygen evolving complex, 17kDa homolog: leaf cDNA csu229 similar to plant oxygen evolving complex polypeptide
7.03
GRMZM2G058070
Ettinger, WF; Theg, SM. 1992. Plant Physiol 99:791-793     Reference: July 18th, 2012
Gene Product: September 1st, 2003
Variation: July 18th, 2012
Gene Model: September 11th, 2018
90 days agoc3h32 C3H-transcription factor32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
GRMZM5G842019
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: July 29th, 2004
Gene Model: September 11th, 2018
91 days agopsei2 cystatin2: cDNA expressed in E. coli inhibits cysteine proteinases; sequence and gene product activity distinct from psei1
8.08
   Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: April 21st, 2008
Variation: January 15th, 2015
91 days agobx14 benzoxazinone synthesis14: encodes an O-methyltransferase that converts DIM2BOA-Glc to HDM2BOA-Glc.
2.05
GRMZM2G127418
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Variation: June 20th, 2016
Gene Model: June 20th, 2016
91 days agotps10 terpene synthase10:
10.03
GRMZM2G179092
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
91 days agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
   Zhang, ZG et al. 2018. Nature communications p.3678     Reference: September 10th, 2018
Variation: June 22nd, 2005
91 days agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G015419
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: January 3rd, 2018
Variation: June 6th, 2014
Gene Model: October 29th, 2015
91 days agobnlg2271  :
7.03
GRMZM2G313643
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
91 days agopme1 pectin methylesterase1: pollen; cDNA and genomic sequences
10.04
GRMZM2G125356
Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012     Reference: February 13th, 2017
Gene Product: September 10th, 2018
Variation: October 8th, 2015
Gene Model: October 8th, 2015
91 days agoumc1112  :
7.03
GRMZM2G139931
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
91 days agoumc1134  :
7.03
GRMZM2G105253
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
91 days agoumc1324  :
7.03
GRMZM2G108874
    Variation: September 1st, 2003
Gene Model: September 10th, 2018
91 days agoprp5 pathogenesis related protein5:
1.06
GRMZM2G402631
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 25th, 2018
Variation: August 20th, 2011
Gene Model: October 30th, 2015
91 days agosci1 subtilisin-chymotrypsin inhibitor homolog1: cDNA from germinating embryo infected with Fusarium moniliforme; similar to subtilisin-chymotrypsin inhibitor
8.05
   Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: August 25th, 2015
91 days agorip2 ribosome-inactivating protein2: genomic sequence produces RIP protein in E. coli; cDNA, SSR umc1782
7.04
GRMZM2G119705
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: November 21st, 2017
Gene Model: July 28th, 2016
91 days agoaos1 allene oxide synthase1: expression induction by herbivory and methyl jasmonate
9.06
GRMZM2G067225
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: October 29th, 2015
91 days agoprp4 pathogenesis related protein4:
7.00
GRMZM2G465226
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 25th, 2018
Variation: August 29th, 2011
Gene Model: November 20th, 2014
91 days agoras6A1 ras-related protein6A1:
 
GRMZM2G075719
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 10th, 2018
91 days agotps2 terpene synthase2:
 
GRMZM2G046615
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
91 days agobx10 benzoxazinone synthesis10:
 
GRMZM2G311036
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
91 days agobx11 benzoxazinone synthesis11:
 
GRMZM2G336824
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
91 days agopme2 pectin methylesterase2:
 
GRMZM2G046618
Hawkins, JS et al. 2014. Plant J 79:375-384     Reference: September 25th, 2015
Gene Product: September 10th, 2018
Gene Model: April 26th, 2014
91 days agocyp19 cytochrome P-450 19:
 
GRMZM2G102079
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 26th, 2016
Gene Model: September 26th, 2016
91 days agopme3 pectin methylesterase3: present and expressed only in Ga1-s genotypes; mutationally inactivated version present in Ga1-m
 
   Moran Lauter, A et al. 2017. Frontiers Plant Sci 8:1926     Reference: November 27th, 2017
Gene Product: September 10th, 2018
91 days agoZm00001d048936  : candidate gene for ga1
 
GRMZM2G119698
Zhang, ZG et al. 2018. Nature communications p.3678     Reference: September 10th, 2018
Gene Product: September 10th, 2018
Gene Model: September 10th, 2018
91 days agotsah1 tryptophan synthase A homolog1: Homologous to tryptophan synthase alpha subunit but does occur as part of native tryptophan synthase. Localized in the cytosol (Kriechbaumer et al 2008). Function unknown.
1.11
GRMZM2G046163
Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: October 14th, 2011
Variation: August 15th, 2014
Gene Model: September 10th, 2018
3 months agomyb152 MYB-transcription factor 152:
7.03
GRMZM2G104551
Agarwal, T et al. 2016. Sci. Rep. 6:28502     Reference: June 23rd, 2016
Variation: September 1st, 2003
Gene Model: September 9th, 2018
3 months agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
   Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499     Reference: September 8th, 2018
Gene Product: August 25th, 2017
Variation: June 29th, 2005
3 months agodek1 defective kernel1: germless; colorless (mosaic) aleurone; floury white endosperm; anthocyanins and carotenoids absent; cultured embryos not obtained (aka clf1, gay1)
1.03
   Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499     Reference: September 8th, 2018
Gene Product: September 1st, 2003
Variation: September 8th, 2018
3 months agobzip7 bZIP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM2G006578
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 8th, 2018
Gene Model: September 8th, 2018
3 months agoumc1450  :
7.03
GRMZM2G181371
    Variation: September 1st, 2003
Gene Model: September 8th, 2018
3 months agonpi394  :
7.03
GRMZM2G043254
Stuber, CW et al. 1992. Genetics 132:823-839     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 8th, 2018
3 months agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
   Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499     Reference: September 8th, 2018
Gene Product: August 25th, 2017
Variation: February 20th, 2015
3 months agonod1 narrow odd dwarf1: mutants are small plants with narrow leaves
 
GRMZM2G027821
Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499   AT4G35920 (TAIR)
LOC_Os03g06120 (MSU/TIGR)
Reference: September 8th, 2018
Gene Product: March 4th, 2017
Variation: September 8th, 2018
Gene Model: March 4th, 2017
3 months agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
3 months agotps23 terpene synthase23: part of defense response to herbivory by western maize rootworm and Spodoptera littoralis but not expressed highly in most North American maize
10.03
GRMZM2G127336
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: July 21st, 2008
Variation: November 21st, 2017
Gene Model: August 22nd, 2012
3 months agotps4 terpene synthase4: gene product raised in E. coli forms same mixture of sesquiterpene olefins as tsp5 but with quantitative differences.
10.03
GRMZM2G117319
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
3 months agotps5 terpene synthase5:
10.03
GRMZM2G074309
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 26th, 2012
3 months agotps26 terpene synthase26: orthologous to stc1 but function in insect herbivory not clear
6.04
GRMZM2G030583
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 5th, 2008
Variation: September 5th, 2008
Gene Model: August 22nd, 2012
3 months agoumc1713  :
7.03
AC208031.3_FG002
    Variation: September 1st, 2003
Gene Model: September 7th, 2018
3 months agoparp1 poly(ADP-ribose) polymerase1:
8.03
GRMZM2G124718
Muli, JK et al. 2018. Plant 6:8-15     Reference: April 28th, 2018
Gene Product: September 7th, 2018
Variation: August 19th, 2010
Gene Model: August 7th, 2014
3 months agoparp2 poly(ADP-ribose) polymerase2:
2.06
GRMZM5G831712
Muli, JK et al. 2018. Plant 6:8-15     Reference: April 28th, 2018
Gene Product: September 7th, 2018
Variation: August 19th, 2010
Gene Model: July 28th, 2016
3 months agotps8 terpene synthase8:
1.04 - 1.04
GRMZM2G038153
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Variation: May 29th, 2012
Gene Model: May 28th, 2012
3 months agotps1 terpene synthase1: possible plant defense gene
2.02
GRMZM2G049538
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: May 28th, 2012
Variation: August 6th, 2013
Gene Model: May 28th, 2012
3 months agotps7 terpene synthase7:
 
GRMZM2G010356
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: July 17th, 2016
Variation: May 28th, 2012
Gene Model: May 28th, 2012
3 months agoks1 kaurene synthase1:
 
GRMZM2G016922
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
3 months agoks4 kaurene synthase4:
 
AC214360.3_FG001
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
3 months agoyg3 yellow-green3: Dominant yellow green mutant; homozygous viable
 
GRMZM2G165521
Sorgini, CA. 2018. Utilizing maize genomics for pre-breeding insights     Reference: September 7th, 2018
Variation: September 7th, 2018
Gene Model: September 7th, 2018
3 months agoks6 kaurene synthase6:
 
GRMZM2G391312
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: December 2nd, 2015
3 months agotps17 terpene synthase17:
 
GRMZM2G010356
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Variation: July 17th, 2016
Gene Model: July 17th, 2016
3 months agocyp20 cytochrome P-450 20:
 
GRMZM2G139467
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 26th, 2016
Gene Model: September 26th, 2016
3 months agotps21 terpene synthase21: has a role in fungal tolerance; involved in the producation of beta-selinene and beta-costic acid
 
GRMZM2G011151
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: May 28th, 2012
Gene Model: September 22nd, 2017
3 months agocyp22 cytochrome P-450 22:
 
GRMZM2G067591
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: February 26th, 2018
Gene Model: February 26th, 2018
3 months agosro5 similar to RCD one5: over-expression in transgenic Arabidopsis enhances abiotic stress resistance
 
GRMZM2G145236
Jiang, HH et al. 2018. Acta Physiol Plant 40:176   AT1G32230 (TAIR) Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
3 months agosro2 similar to RCD one2:
 
GRMZM5G866843
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
3 months agosro3 similar to RCD one3:
 
GRMZM2G011469
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
3 months agosro1 similar to RCD one1:
 
GRMZM2G122543
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
3 months agosro6 similar to RCD one6:
 
GRMZM2G177878
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
3 months agosro4 similar to RCD one4:
5.00
   Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Variation: September 25th, 2007
3 months agotps6 terpene synthase6:
10.03
GRMZM2G127087
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 3rd, 2008
Variation: May 28th, 2012
Gene Model: May 28th, 2012
3 months agoks3 kaurene synthase3: functionality inferred from expression data and sequence similarity (Song et al 2011; Nelissen et al 2012)
2.02
GRMZM2G093603
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: August 15th, 2012
3 months agobnlg1792  :
7.02
GRMZM2G024615
    Variation: September 1st, 2003
Gene Model: September 6th, 2018
3 months agophd30 PHD-transcription factor 30: similar to Arabidopsis PHD finger and bromo-adjacent homology domain-containing proteinLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
GRMZM2G091265
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 6th, 2018
3 months agoumc1393  :
7.02
GRMZM2G052667
    Variation: September 1st, 2003
Gene Model: September 6th, 2018
3 months agoumc1787  :
7.02
GRMZM2G121189
    Variation: September 1st, 2003
Gene Model: September 6th, 2018
3 months agoAY109809  :
7.02
GRMZM2G035451
    Variation: July 29th, 2004
Gene Model: September 6th, 2018
3 months agoAY109968  :
7.02
GRMZM2G450488
    Variation: September 25th, 2007
Gene Model: September 6th, 2018
3 months agoras11C2 ras-related protein11C2: similar to Arabidopsis RAB GTPase homolog A1F
 
GRMZM2G124732
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 22nd, 2011
Gene Model: September 6th, 2018
3 months agommc0162  :
7.02
AC235546.1_FG001
    Variation: September 1st, 2003
Gene Model: September 5th, 2018
3 months agohtn1 Helminthosporium turcicum resistanceN1: formerly HtN; dominant Htn1 plants resistant to Exserohilum turcicum
8.06
GRMZM2G164612
Yang, P et al. 2018. New Phytol pp.doi: 10.1111/nph.15419   At1g66980 (TAIR)
LOC_Os01g49580 (MSU/TIGR)
Reference: September 5th, 2018
Gene Product: July 1st, 2015
Variation: July 14th, 2015
Gene Model: July 1st, 2015
3 months agoembp1 EM binding protein1 homologue: bZIP protein binds to O2 box; wheat EM orthologue
7.02
GRMZM2G095078
Busk, P and Pages, M. 1997. Protein binding to the abscisic acid-responsive element is independent of VIVIPAROUS1 in vivo. Plant Cell 9:2261-2270     Reference: September 1st, 2003
Gene Product: August 21st, 2018
Variation: September 5th, 2018
Gene Model: September 5th, 2018
3 months agoAY110473  :
7.02
GRMZM2G061562
    Variation: September 25th, 2007
Gene Model: September 5th, 2018
3 months agoAY110576  :
7.02
GRMZM2G032699
    Variation: July 29th, 2004
Gene Model: September 5th, 2018
3 months agopco103663  :
7.02
GRMZM2G125516
    Variation: September 25th, 2007
Gene Model: September 5th, 2018
3 months agocsu582  : similar to Arabidopsis Pyridoxal biosynthesis protein PDX1.3
7.00
GRMZM2G120652
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
3 months agofnr2 ferredoxin NADP reductase2:
7.01
GRMZM2G011858
    Variation: October 9th, 2009
Gene Model: September 4th, 2018
3 months agoumc1159  :
7.01
GRMZM2G144726
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
3 months agoumc1426  :
7.00
GRMZM2G006071
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
3 months agoumc1672  :
7.00
GRMZM2G044060
    Variation: September 1st, 2003
Gene Model: September 4th, 2018
3 months agommp18  :
7.01
GRMZM2G066290
    Variation: September 4th, 2018
Gene Model: September 4th, 2018
3 months agoAW308691  :
7.01
GRMZM2G542497
    Variation: July 29th, 2004
Gene Model: September 4th, 2018
3 months agomeg2 maternally expressed gene2: Maternally transmitted alleles preferentially expressed in endosperm
7.01
GRMZM2G094054
Xiong, Y et al. 2014. BMC Plant Biology 14:204     Reference: August 29th, 2014
Variation: August 29th, 2014
Gene Model: September 4th, 2018
3 months agomeg4 maternally expressed gene4: Maternally transmitted alleles preferentially expressed in endosperm
7.02
GRMZM2G137959
Han, ZX et al. 2018. Genetics 209:983-995     Reference: July 31st, 2018
Variation: October 25th, 2009
Gene Model: September 4th, 2018
3 months agoalt7 alanine aminotransferase7: bundle sheath alanine transasminase; see also alt8, alt9
7.00
GRMZM2G120563
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: August 22nd, 2014
Gene Model: September 4th, 2018
3 months agophp20719a  :
10.04
GRMZM2G139797
Jia, SG et al. 2016. G3 6:2385-2395     Reference: August 10th, 2016
Variation: September 3rd, 2018
Gene Model: September 2nd, 2018
3 months agonpi105a  : Mapped major band to this site.
10.03
GRMZM2G143356
Caffrey, JJ et al. 1995. MNL 69:3-4     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
3 months agonpi114a  : Mapped major band to this site. npi114B was called npi202 but is listed as npi114B in the database.
8.01
GRMZM2G140885
Stuber, CW et al. 1992. Genetics 132:823-839     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
3 months agonpi264  :
10.04
GRMZM2G424348
Cowen, N et al. 1992. Theor Appl Genet 84:720-724     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
3 months agonpi352  :
7.04
GRMZM5G860235
    Variation: September 2nd, 2018
Gene Model: September 1st, 2018
3 months agophp06005  :
10.03
GRMZM2G571844
Matz, EC et al. 1992. MNL 66:107     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
3 months agobhlh86 bHLH-transcription factor 86: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM5G818643
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
3 months agoemp108 empty pericarp108: essential for kernel development; required for splicing of multiple introns and complex I biogenesis
 
GRMZM2G388778
Sun, F et al. 2018. Plant J pp.doi: 10.1111/tpj.14030   AT5G18390 (TAIR)
LOC_Os08g41380 (MSU/TIGR)
Reference: July 13th, 2018
Gene Product: December 27th, 2016
Variation: September 1st, 2018
Gene Model: July 13th, 2018
3 months agoemp18 empty pericarp18: mutants have an embryo-lethal phenotype; functions in mitochondrial atp6 and cox2 transcript editing
 
GRMZM2G471348
Li, X-L et al. 2018. New Phytol pp.doi: 10.1111/nph.15425     Reference: September 1st, 2018
Gene Product: December 27th, 2016
Variation: September 1st, 2018
Gene Model: September 1st, 2018
3 months agocry2 cryptochrome2:
2.04
GRMZM2G049549
Coles, N et al. 2010. Genetics 184:799-812     Reference: April 1st, 2010
Gene Product: August 31st, 2018
Variation: September 5th, 2014
Gene Model: September 5th, 2014
3 months agocry4 cryptochrome4:
4.05
       Gene Product: August 31st, 2018
3 months agogi2 gigantea2: homologous to Arabidopsis photoperiod gene gigantea.
3.03
GRMZM5G844173
Li, B et al. 2018. Genome Res pp.doi: 10.1101/gr.229716.117     Reference: August 31st, 2018
Gene Product: September 19th, 2012
Variation: September 18th, 2012
Gene Model: September 18th, 2012
3 months agomch1 maize CRY1 homolog1: Homolog to yeast 40S ribosomal protein S14 gene family (cDNA probe)
 
GRMZM5G805627
Larkin, JC et al. 1989. Genes Dev 3:500-509     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: October 14th, 2010
Gene Model: August 31st, 2018
3 months agomybr17 MYB-related-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.09
GRMZM2G071977
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: August 31st, 2018
3 months agosnrkII8 SnRK2 serine threonine protein kinase8: salt tolerance expressed in Arabidopsis host (Vilela 2013)
 
GRMZM2G138861
Wu, QQ et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12714     Reference: August 31st, 2018
Gene Product: April 14th, 2018
Variation: August 31st, 2018
Gene Model: February 11th, 2015
3 months agofkf1 flavin-binding kelch repeat f-box1: Involved in regulating the circadian clock and photoperiodic flowering
 
GRMZM2G107945
Li, B et al. 2018. Genome Res pp.doi: 10.1101/gr.229716.117     Reference: August 31st, 2018
Gene Product: July 25th, 2017
Gene Model: December 12th, 2017
3 months agocry3 cryptochrome3: a homolog of CRY2, encoding cryptochrome-2, a photoreceptor regulated by blue light and involved in floral initiation (Li et al., 2018)
 
GRMZM2G172152
Li, B et al. 2018. Genome Res pp.doi: 10.1101/gr.229716.117     Reference: August 31st, 2018
Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
3 months agocry1 cryptochrome1:
5.05
GRMZM2G024739
    Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
3 months agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
   Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: September 1st, 2003
Variation: September 4th, 2013
3 months agocdo202a(mcf)  : similar to Arabidopsis adenine nucleotide transporter 1
6.07
GRMZM2G067877
    Variation: August 30th, 2018
Gene Model: August 30th, 2018
3 months agobnlg1136a  :
6.07
GRMZM5G847466
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
3 months agoumc1127  :
6.08 - 6.08
GRMZM2G412937
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
3 months agoumc1653  :
6.07
GRMZM2G438895
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
3 months agonpi113b  : Mapped minor band to this site.
2.08
GRMZM2G035985
    Variation: September 1st, 2003
Gene Model: August 30th, 2018
3 months agofnsii1 flavone synthase typeII1: Encodes a flavone synthase that is of the oxygen- and NADPH-dependent cytochrome P450 membrane-bound monooxygenase class
 
GRMZM2G148441
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: August 14th, 2015
Gene Model: August 14th, 2015
3 months agoufgt3 UDP-flavone-glycosyltransferase3:
 
GRMZM2G063550
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: August 30th, 2018
Gene Model: August 30th, 2018
3 months agotrh4 thioredoxin h homolog4:
 
GRMZM2G066612
Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: September 1st, 2003
Gene Model: August 30th, 2018
3 months agobnlg1740  : similar to Arabidopsis Cytochrome b561/ferric reductase transmembrane protein family
6.07
GRMZM2G023133
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
3 months agoumc1350  :
6.07
GRMZM2G038284
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
3 months agoumc1296  : similar to Arabidopsis cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4
6.07
GRMZM2G021406
    Variation: August 29th, 2018
Gene Model: August 29th, 2018
3 months agoumc1463  :
6.06
GRMZM2G010357
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
3 months agoumc1490  : similar to Araidopsis double-stranded DNA-binding-like protein
6.07
GRMZM2G174741
    Variation: September 1st, 2003
Gene Model: August 29th, 2018
3 months agoumc62  : similar to Arabidopsis ribosomal protein L18ae-like protein
6.07
GRMZM2G022453
Rocheford, TR. 1994. Proc Annu Corn Sorghum Ind Res Conf 49:239-249     Reference: September 1st, 2003
Variation: August 29th, 2018
Gene Model: August 29th, 2018
3 months agoAY104289  :
6.07
GRMZM2G085849
    Variation: September 25th, 2007
Gene Model: August 29th, 2018
3 months agoAY105785  :
6.06
GRMZM2G176396
    Variation: March 21st, 2007
Gene Model: August 29th, 2018
3 months agoAY109797  : similar to Arabidopsis Ubiquitin-conjugating enzyme family protein
6.07
GRMZM2G085849
    Variation: July 29th, 2004
Gene Model: August 29th, 2018
3 months agoAY110400  :
6.07
GRMZM5G872417
    Variation: July 29th, 2004
Gene Model: August 29th, 2018
3 months agoras11C3 ras-related protein11C3:
 
GRMZM2G020661
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 24th, 2011
Gene Model: August 29th, 2018
3 months agoIDP148  :
6.06
GRMZM2G158526
    Variation: March 31st, 2005
Gene Model: August 29th, 2018
3 months agoapx5 Cytosolic ascorbate peroxidase5: leaf cDNA csu238, partial 5' sequence similar to plant ascorbate peroxidase
6.07
GRMZM2G093346
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 10th, 2012
Gene Model: August 29th, 2018
3 months agoid1 indeterminate growth1: requires extended growth for flowering; vegetatively totipotent with gt1 and factors for perennialism
1.08
   Karl, JR. 2014. MNL 88:e14     Reference: August 28th, 2018
Gene Product: January 3rd, 2015
Variation: August 3rd, 2015
3 months agoubi7 ubiquitin-conjugating enzyme7:
6.05
GRMZM2G012052
van Nocker, S. 1998. Plant Physiol 116:1191     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 28th, 2018
3 months agolac2 laccase2:
6.05
GRMZM2G146152
Caparros-Ruiz, D et al. 2006. Plant Sci 171:217-225     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
3 months agoras8A2 ras-related protein8A2:
 
GRMZM5G878008
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: August 28th, 2018
3 months agome5 malic enzyme5:
6.05
GRMZM5G886257
Alvarez, CE et al. 2013. Photosynth Res 115:65-80     Reference: August 21st, 2014
Gene Product: August 21st, 2014
Variation: August 16th, 2011
Gene Model: August 27th, 2018
3 months agoumc1352a  :
6.05
GRMZM2G032896
    Variation: August 26th, 2018
Gene Model: August 27th, 2018
3 months agoumc1379  :
6.05
GRMZM2G117439
    Variation: September 1st, 2003
Gene Model: August 27th, 2018
3 months agoumc1388  :
6.05
GRMZM2G093325
    Variation: September 1st, 2003
Gene Model: August 27th, 2018
3 months agoumc1413  :
6.05
GRMZM2G030123
    Variation: September 1st, 2003
Gene Model: August 27th, 2018
3 months agonpi252  : similar to Arabidopsis carbon catabolite repressor protein 4-like 4
6.05
GRMZM2G054056
Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 27th, 2018
3 months agotor1 target of rapamycin1: similar to Arabidpsis FKBP12-rapamycin complex-associated proteinexpression is highly regulated during germination
6.05
GRMZM2G049342
Garcia, NS; Messing, J. 2017. Frontiers Plant Sci 8:1723     Reference: November 23rd, 2017
Gene Product: November 21st, 2017
Gene Model: August 27th, 2018
3 months agoAY110260  :
6.05
GRMZM2G319109
    Variation: September 25th, 2007
Gene Model: August 27th, 2018
3 months agokrp9 kinesin-related protein9: Is a member of MCAK family and may depolymerize microtubules per C. Lawrence.
6.05
GRMZM5G881464
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Variation: September 1st, 2003
Gene Model: August 26th, 2018
3 months agoumc1114  :
6.05
GRMZM5G898274
    Variation: September 1st, 2003
Gene Model: August 26th, 2018
3 months agoumc1314  : similar to Arabidopsis Ras-related protein RABA2c
6.05
GRMZM2G061912
    Variation: September 1st, 2003
Gene Model: August 26th, 2018
3 months agovpp1 vacuolar proton pump homolog1: glucose-starved root tip cDNA closely similar to Oryza gene (TIGR match)
6.04
GRMZM2G148200
Wisniewski, J; Rogowsky, P. 2004. Plant Mol Biol. 56:325-337     Reference: July 28th, 2005
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2018
3 months agoumc1796  :
6.04
GRMZM2G064382
    Variation: September 1st, 2003
Gene Model: August 25th, 2018
3 months agopip1b plasma membrane intrinsic protein1:
5.06
   Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: September 1st, 2003
Variation: April 26th, 2016
3 months agocipk8 calcineurin B-like-interacting protein kinase8:
 
GRMZM2G383240
Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469     Reference: June 5th, 2017
Gene Product: August 25th, 2018
Variation: June 2nd, 2017
Gene Model: June 2nd, 2017
3 months agovpp8 vacuolar proton pump8: low copy leaf cDNA csu37, similar to yeast ATPase subunit
7.04
GRMZM2G019999
Couee, I and Chevalier, C. 1996. Nucleotide submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
3 months agoglp1 germin-like protein1:
6.05
GRMZM2G064096
Fan, Z, et al. 2005. Biochem Biophys Res Commun. 331:1257-63     Reference: February 14th, 2006
Gene Product: December 24th, 2015
Variation: August 25th, 2018
Gene Model: August 24th, 2018
3 months agorte1 rotten ear1: mutants show distinct defects in vegetative and reproductive development, eventually causing widespread sterility in its tassel and ear.
1.05
GRMZM2G166159
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: June 24th, 2017
Variation: July 21st, 2014
Gene Model: July 19th, 2014
3 months agorte3 rotten ear3: phylogenetically related to Class II clade boron transporters
 
GRMZM2G051753
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
3 months agocul2 cullin2:
 
GRMZM2G166694
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: May 10th, 2018
Gene Model: May 10th, 2018
3 months agonhx7 Na+/H+ antiporter 7: silicon up-regulates expression
 
GRMZM2G098494
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018   AT1G14660 (TAIR) Reference: August 20th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
3 months agovpp7 vacuolar proton pump7: SNP; NCBI defines as a vacuolar proton pump-like protein
 
GRMZM2G069095
Wisniewski, J; Rogowsky, P. 2004. Plant Mol Biol. 56:325-337     Reference: July 28th, 2005
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
3 months agonhx8 Na+/H+ antiporter 8: Salt inducable
 
GRMZM2G067747
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88   AT1G79610 (TAIR) Reference: August 25th, 2018
Gene Product: August 25th, 2018
Gene Model: August 25th, 2018
3 months agonhx5 Na+/H+ antiporter 5: shoot-specific and NaCl-specific expression.
7.05
GRMZM2G027851
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018     Reference: August 20th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
3 months agonhx1 Na+/H+ antiporter 1: root-specific and NaCl-specific expression.
 
   Zorb, C; Schubert, S. 2005. J Plant Physiol. 162:55-66     Reference: January 29th, 2010
Gene Product: August 25th, 2018
3 months agonhx2 Na+/H+ antiporter 2: shoot- and root-specific and NaCl-specific expression; predominant isoform under control conditions(mM NaCl).
 
GRMZM2G063492
Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
3 months agonhx4 Na+/H+ antiporter 4: shoot-specific expression.
 
   Zorb, C; Schubert, S. 2005. J Plant Physiol. 162:55-66     Reference: January 29th, 2010
Gene Product: August 25th, 2018
3 months agobnlg2191  :
6.02
GRMZM2G047969
    Variation: September 1st, 2003
Gene Model: August 24th, 2018
3 months agoumc1105  :
6.04
GRMZM2G041258
    Variation: September 1st, 2003
Gene Model: August 24th, 2018
3 months agopgl2 polygalacturonase2: cDNA and genomic clones, sequence nearly identical to pgl1; one of 10-12 member gene family
6.03
GRMZM2G454608
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: March 10th, 2013
Gene Model: August 24th, 2018
3 months agopgl3 polygalacturonase3: cDNA and genomic clones; one of 10-12 member gene family
6.03
GRMZM2G160626
Barakate, A et al. 1993. J Mol Biol 229:797-801     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 24th, 2018
3 months agokrp5 kinesin-related protein5:
6.04
GRMZM2G575566
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Gene Model: August 24th, 2018
3 months agoAY104775  :
6.03
GRMZM2G106427
    Variation: September 25th, 2007
Gene Model: August 24th, 2018
3 months agopgl9 exopolygalacturonase9:
 
GRMZM2G418644
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Gene Model: August 24th, 2018
3 months agopebp26 phosphatidylethanolamine-binding protein26:
 
GRMZM2G400167
Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Variation: December 14th, 2010
Gene Model: July 28th, 2016
3 months agoumc1257  :
6.02
GRMZM2G128485
    Variation: September 1st, 2003
Gene Model: August 23rd, 2018
3 months agoca2p4 CCAAT-HAP2-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: August 9th, 2016
3 months agomch3 maize CRY1 homolog3: Homolog to yeast 40S ribosomal protein S14 gene familysimilar to Arabidopsis 40S ribosomal protein S14-3
 
GRMZM2G100462
    Variation: October 14th, 2010
Gene Model: August 23rd, 2018
3 months agocol20 C2C2-CO-like-transcription factor 20:
 
GRMZM2G414423
Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: June 18th, 2018
Gene Model: August 23rd, 2018
3 months agocchh6 Cys2His2 Zinc Finger6:
 
AC205250.3_FG004
Su, HH et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery299     Reference: August 23rd, 2018
Gene Product: April 4th, 2017
Gene Model: August 23rd, 2018
3 months agoend1 early nodulin homolog1: endosperm cDNA 5C04A12 (uaz227), similar to soybean early nodulin cDNA
6.01
GRMZM2G014705
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 22nd, 2018
3 months agobzip100 bZIP-transcription factor 100: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zong, N et al. 2018. J Integrative Agriculture doi: 10.1016/S2095-3119(18)61947-1     Reference: May 18th, 2018
Gene Product: August 21st, 2018
3 months agobzip4 bZIP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ma, HZ et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00436     Reference: August 21st, 2018
Gene Product: August 21st, 2018
Variation: August 21st, 2018
3 months agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: August 21st, 2018
Variation: July 7th, 2017
3 months agobzip160 bZIP-transcription factor 60: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180   AT1G75390 (TAIR)
LOC_Os02g03960 (MSU/TIGR)
Reference: May 12th, 2011
Gene Product: August 21st, 2018
3 months agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
   Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480     Reference: May 27th, 2017
Gene Product: August 21st, 2018
Variation: February 6th, 2011
3 months agoumc1444  :
6.01
GRMZM2G473788
    Variation: September 1st, 2003
Gene Model: August 20th, 2018
3 months agoubi2 ubiquitin2: genomic sequence encodes 7 contiguous ubiquitin monomers; transcript specific probe
4.09
GRMZM2G419891
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018     Reference: August 20th, 2018
Gene Product: September 1st, 2003
Variation: November 18th, 2014
Gene Model: August 7th, 2014
3 months agocipk9 calcineurin B-like-interacting protein kinase9: silicon up-regulates expression
 
GRMZM2G330049
Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018   AT5G10930 (TAIR) Reference: August 20th, 2018
Gene Product: May 13th, 2014
Gene Model: August 20th, 2018
3 months agowox3a WUSCHEL homeobox 3A: embryonic transcription factor; expression in embryonic leaf similar to wox3b, but distinct from ns1/ns2 also in the wox3 gene family (Nardmann et al 2007)
6.01
GRMZM2G122537
Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: August 19th, 2018
Gene Model: August 18th, 2018
3 months agoploc1 plastocyanin homolog1: leaf cDNA csu257, similar to plastocyanin
6.01
GRMZM2G071450
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 18th, 2018
Gene Model: August 19th, 2018
3 months agoumc1606  :
6.01
GRMZM2G301803
    Variation: September 1st, 2003
Gene Model: August 18th, 2018
3 months agobnl6.29a  :
6.01
GRMZM2G381076
McMullen, MD and Louie, R. 1989. Mol Plant-Microbe Interact 2:309-314     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 18th, 2018
3 months agoumc2311  :
6.01
GRMZM2G036908
    Variation: September 25th, 2007
Gene Model: August 18th, 2018
3 months agobnlg161b  :
6.00
       Variation: August 17th, 2018
3 months agoppr5 pentatricopeptide repeat 5: stabilizes the chloroplast unspliced trnG precursor
4.08
GRMZM2G025409
Rojas, M et al. 2018. Nucl Acid Res pp.doi: 10.1093/nar/gky737   AT4G39620 (TAIR)
LOC_Os02g51480 (MSU/TIGR)
Os02g0750400 (Gramene)
Reference: August 16th, 2018
Gene Product: September 15th, 2012
Variation: August 5th, 2011
Gene Model: July 14th, 2011
Recommended by Alice Barkan:
November 11th, 2008
3 months agol15 luteus15: like l4; lethal yellow seedling; chloroplast mRNA processing.Chloroplast PPR protein. Activates atpH translation. Stabilizes atpH and psaJ RNA termini. Binds atpI-atpH and psaJ-rpl33 intergenic regions. (A. Barkan, 2015)
6.02 - 6.03
GRMZM2G177169
Rojas, M et al. 2018. Nucl Acid Res pp.doi: 10.1093/nar/gky737   AT2G18940 (TAIR)
LOC_Os05g19380 (MSU/TIGR)
Os05g0275000 (Gramene)
Reference: August 16th, 2018
Gene Product: December 30th, 2015
Variation: November 7th, 2012
Gene Model: November 6th, 2012
3 months agocps1 chloroplast protein synthesis1: Chloroplast protein synthesis 1: chloroplast cysteinyl-tRNA synthetase. (A. Barkan, 2015)reduced levels of RUBISCO and all thylakoid membrane complexes; unaltered chloroplast mRNA; decreased chloroplast polysomes
1.06 - 1.12
GRMZM2G156565
Rojas, M et al. 2018. Nucl Acid Res pp.doi: 10.1093/nar/gky737     Reference: August 16th, 2018
Gene Product: October 3rd, 2011
Variation: September 15th, 2011
Gene Model: September 6th, 2011
3 months agopgr3 proton gradient regulation3 homolog: Ortholog of Arabidopsis PGR3. Chloroplast PPR protein that stabilizes 5'-end of petL RNA and is required for accumulation of the thylakoid NDH complex. Global protein deficiencies imply additional functions in maize. (A. Barkan, 2015)Ortholog of Arabidopsis PGR3, a PPR protein that stabilizes 5'-end of cp petL RNA and is required for NDH accumulation. Additional functions in maize, with more global effect on accumulation of cp complexes.
 
GRMZM2G372632
Rojas, M et al. 2018. Nucl Acid Res pp.doi: 10.1093/nar/gky737   AT4G31850 (TAIR)
LOC_Os10g28600 (MSU/TIGR)
Reference: August 16th, 2018
Gene Product: December 27th, 2016
Variation: December 30th, 2015
Gene Model: February 17th, 2015
3 months agopip2a plasma membrane intrinsic protein2:
2.03
   Vajpai, M et al. 2018. Sci. Rep. 8:12055     Reference: August 15th, 2018
Gene Product: September 1st, 2003
Variation: March 18th, 2013
3 months agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
GRMZM2G098643
Kamada, M et al. 2018. Life Sci Space Res. 18:42-51     Reference: August 14th, 2018
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: January 24th, 2013
4 months agopza01735  :
2.06
       Gene Product: August 12th, 2018
4 months agoln1 linoleic acid1: lower ratio of oleate to linoleate in kernelembryo oil content and composition,cloned by chromosome walk to high oil QTL; maybe allele of ln1 (Zheng 2008)
6.04 - 6.04
GRMZM2G169089
Yan, BW et al. 2018. Genome doi: 10.1139/gen-2018-002     Reference: August 11th, 2018
Gene Product: August 12th, 2018
Variation: August 16th, 2014
Gene Model: August 16th, 2014
4 months agodgati2 diacylglycerol acyltransferase-typeI2:
 
GRMZM2G130749
Yan, BW et al. 2018. Genome doi: 10.1139/gen-2018-002     Reference: August 11th, 2018
Gene Product: August 12th, 2018
Gene Model: July 23rd, 2018
4 months agodgatii1 diacylglycerol acyltransferase-typeII1:
 
GRMZM2G042356
Yan, BW et al. 2018. Genome doi: 10.1139/gen-2018-002     Reference: August 11th, 2018
Gene Product: August 12th, 2018
Gene Model: August 11th, 2018
4 months agodgatii2 diacylglycerol acyltransferase-typeII2:
 
GRMZM2G050641
Yan, BW et al. 2018. Genome doi: 10.1139/gen-2018-002     Reference: August 11th, 2018
Gene Product: August 12th, 2018
Gene Model: August 11th, 2018
4 months agodgatiii1 diacylglycerol acyltransferase-typeIII1:
 
GRMZM2G122943
Yan, BW et al. 2018. Genome doi: 10.1139/gen-2018-002     Reference: August 11th, 2018
Gene Product: August 12th, 2018
Gene Model: August 11th, 2018
4 months agoaasr1 abscisic acid stress ripening1: protects the major ARS protein in maize; protects kernel yield under water deficit; SSR pio059, IDP9044
10.02
GRMZM2G136910
Li, XY et al. 2018. Funct Plant Biol pp.doi: 10.1071/FP17356     Reference: August 10th, 2018
Gene Product: December 1st, 2011
Variation: December 30th, 2011
Gene Model: November 1st, 2011
4 months agoaasr3 abscisic acid stress ripening3:
2.04
GRMZM2G044132
Li, XY et al. 2018. Funct Plant Biol pp.doi: 10.1071/FP17356     Reference: August 10th, 2018
Gene Product: December 1st, 2011
Gene Model: November 1st, 2011
4 months agoaasr5 abscisic acid stress ripening5:
10.04
GRMZM2G052100
Li, XY et al. 2018. Funct Plant Biol pp.doi: 10.1071/FP17356     Reference: August 10th, 2018
Gene Product: November 4th, 2011
Variation: April 14th, 2007
Gene Model: November 1st, 2011
4 months agobhlh36 bHLH-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: August 9th, 2018
4 months agocyp7 cytochrome P450 7: single copy cDNA (unpublished)
3.05
GRMZM2G021436
Jameson, N et al. 2008. Plant Mol Biol 67:295-304     Reference: March 5th, 2010
Gene Product: September 26th, 2016
Variation: February 15th, 2014
Gene Model: August 7th, 2018
4 months agogbss1b granule-bound starch synthase1b:
 
GRMZM2G008263
Zhao, LX et al. 2018. Plant Physiol Biochem 130:493-500     Reference: August 7th, 2018
Gene Product: June 4th, 2008
Variation: August 4th, 2011
Gene Model: November 20th, 2014
4 months agobnl12.30a  :
8.06
GRMZM2G015735
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 7th, 2018
4 months agopsbA (cp)  :
 
   Chotewutmontri, P; Barkan, A. 2018. PLoS Genetics 14:e1007555     Reference: August 7th, 2018
Gene Product: September 1st, 2003
4 months agomc1 mucronate1: dominant Mc1 kernels have opaque endospermendosperm-specific protein cDNA
2.06
GRMZM2G060429
Mainieri, D et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery287/5063680     Reference: August 4th, 2018
Gene Product: September 17th, 2010
Variation: September 16th, 2010
Gene Model: August 4th, 2018
4 months agolhcb1 light harvesting chlorophyll a/b binding protein1: Mapped by Wright and Helentjaris (1988).
3.09
GRMZM2G104549
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: January 8th, 2005
Gene Model: August 3rd, 2018
4 months agofdx5 ferredoxin5: leaf protein, cDNA clone, distinct amino acid sequence compared to other ferredoxins, gene specific probe (aka pfd5)
 
GRMZM2G122327
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: August 3rd, 2018
Gene Model: August 1st, 2018
4 months agolhcb10 light harvesting chlorophyll a/b binding protein10: gene-specific cDNA probe; low expression in bundle sheath cells (aka cab1)unique genomic sequence; promoter is light regulated in tobacco and maize leaf mesophyll protoplasts (Knight et al. 1992)
 
GRMZM2G351977
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Gene Model: August 3rd, 2018
4 months agobnlg1893  :
2.09
GRMZM2G444543
    Variation: September 1st, 2003
Gene Model: August 2nd, 2018
4 months agow*-6577 white candidate 6577:
1.06 - 1.12
   MGCSC. 1972. Unpublished mimeographed notes     Reference: September 1st, 2003
Variation: August 2nd, 2018
4 months agocb2 crossbanded2: (was cb*-N652B) green seedling with yellowish white diurnal crossbands
2.02 - 2.03
   Coe, E. 2006. MNL 80:7     Reference: July 25th, 2006
Variation: August 2nd, 2018
4 months agoj*-5828 japonica*-5828:
1.00 - 1.12
       Variation: August 2nd, 2018
4 months agoagpsl1 ADP glucose pyrophosphorylase small subunit leaf1: leaf-specific
1.07
GRMZM2G163437
Boehlein, S et al. 2018. Plant J pp.doi: 10.1111/tpj.14053     Reference: August 1st, 2018
Gene Product: September 1st, 2003
Variation: April 3rd, 2011
Gene Model: June 15th, 2012
4 months agoagpll1 ADP glucose pyrophosphorylase large subunit leaf1AGPL4:
1.10
GRMZM2G391936
Boehlein, S et al. 2018. Plant J pp.doi: 10.1111/tpj.14053     Reference: August 1st, 2018
Gene Product: January 3rd, 2014
Variation: September 22nd, 2017
Gene Model: September 22nd, 2017
4 months agoagpll2 ADP glucose pyrophosphorylase large subunit leaf2:
 
GRMZM2G144002
Boehlein, S et al. 2018. Plant J pp.doi: 10.1111/tpj.14053     Reference: August 1st, 2018
Gene Product: January 3rd, 2014
Gene Model: January 7th, 2014
4 months agoagp1 ADP glucose pyrophosphorylase small subunit embryo 1: embryo cDNA that hybridizes to endosperm transcripts, distinct from sh2 and bt2 but most similar to the bt2 gene product
2.06
GRMZM2G106213
Boehlein, S et al. 2018. Plant J pp.doi: 10.1111/tpj.14053     Reference: August 1st, 2018
Gene Product: January 3rd, 2014
Variation: November 4th, 2014
Gene Model: November 4th, 2014
4 months agoabp1 auxin binding protein1: putative auxin receptor, single band in Southerns, endoplasmic reticulum and plasma membrane locales (aka axr1, aux311)Dominant Scmv1 and Scmv2 confer resistance
3.05 - 3.05
   Redinbaugh, MG; Stewart, LR. 2018. Annu Rev Virol. doi: 10.1146/annurev-virology-092917-043413     Reference: July 31st, 2018
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
4 months agohox1 homeobox1: cDNA Zmhox1a, meristem specific, nuclear, protein product binds to feedback control element of sh1 promoter; SSR's umc1309, umc1343
8.05
GRMZM2G136369
Han, ZX et al. 2018. Genetics 209:983-995     Reference: July 31st, 2018
Gene Product: September 1st, 2003
Variation: June 26th, 2014
Gene Model: June 25th, 2014
4 months agoscmv1 resistance to sugarcane mosaic virus1: resistance requires dominant factors Scm1 and Scm2; resistance in various inbreds is concordant for SCMV and MDMV, yet recombinants of Scm1 occur with the NOR, whereas none were found for Mdm1 by Simcox et al. (1995)
6.00 - 6.01
GRMZM2G014055
Redinbaugh, MG; Stewart, LR. 2018. Annu Rev Virol. doi: 10.1146/annurev-virology-092917-043413     Reference: July 31st, 2018
Gene Product: September 1st, 2003
Variation: June 29th, 2005
Gene Model: September 7th, 2017
4 months agogl6 glossy6: like gl1, but seedling leaf surface bright green instead of bluish
3.05 - 3.05
GRMZM2G139786
Li, L et al. 2018. bioRxiv preprint pp.doi: 10.1101/378687     Reference: July 28th, 2018
Gene Product: July 28th, 2018
Variation: July 28th, 2018
Gene Model: July 28th, 2018
4 months agobnlg108  :
2.04
GRMZM2G151021
    Variation: September 1st, 2003
Gene Model: July 27th, 2018
4 months agoumc2403  :
2.02
GRMZM2G106413
    Variation: February 23rd, 2010
Gene Model: July 27th, 2018
4 months agoldp1 luminidependens protein1: single copy leaf cDNA, csu838, similar to Arabidopsis luminidependens protein which regulates floral induction
3.05
GRMZM2G106613
Cui, ZH et al. 2018. Theor Appl Genet pp.doi: 10.1007/s00122-018-3142-2     Reference: July 26th, 2018
Variation: April 28th, 2007
Gene Model: August 13th, 2014
4 months agoprp3 pathogenesis-related protein3:
4.02
GRMZM2G117989
Bravo, J; Campo, S; Murillo, I; Coca, M; Segundo, BS. 2003. Plant Mol Biol. 52:745-749     Reference: October 15th, 2003
Gene Product: July 25th, 2018
Gene Model: December 24th, 2015
4 months agoesr6 embryo surrounding region6: transcript specific to embryo surrounding region near basal endosperm transfer layer
4.09
GRMZM2G048353
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: July 25th, 2018
Variation: January 5th, 2016
Gene Model: January 5th, 2016
4 months agoes4 embryo sac4: one of 4-5 copy gene family; pre-zygotic, embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G128301
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
4 months agoes1 embryo sac1: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G012012
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
4 months agoes2 embryo sac2: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G128301
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
4 months agoes3 embryo sac3: one of 4-5 copy gene family; pre-zygotic embyro sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G128301
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
4 months agohagtf3 GNAT-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.08
GRMZM2G131618
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: January 4th, 2018
Variation: July 25th, 2018
Gene Model: July 25th, 2018
4 months agoprp7 pathogenesis-related protein7:
1.03
GRMZM2G112524
Xie, Y-R et al. 2010. J Plant Physiol 167:121-130     Reference: October 1st, 2017
Gene Product: July 25th, 2018
Gene Model: September 30th, 2017
4 months agoccd8 carotenoid cleavage dioxygenase8: Mutants have mild branching, short stature, small ear size, and narrow-stalk
 
GRMZM2G446858
Zhu, X-M et al. 2018. Frontiers Plant Sci 9:966     Reference: July 25th, 2018
Gene Product: September 20th, 2012
Variation: September 21st, 2012
Gene Model: September 20th, 2012
4 months agodef2 defensin-like protein2:
 
GRMZM2G368861
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: July 25th, 2018
Gene Model: June 10th, 2016
4 months agodef4 defensin-like protein4:
 
GRMZM2G153488
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: July 25th, 2018
Gene Model: September 16th, 2017
4 months agoprp6 pathogenesis-related protein6: encoded protein exerted broad spectrum antifungal activity
 
GRMZM2G112488
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: July 25th, 2018
Gene Model: September 30th, 2017
4 months agodef3 defensin-like protein3: Maize callus containing the NC300 allele was more resistant to maize pests than GUS callus.
 
GRMZM2G149869
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: July 25th, 2018
Variation: July 25th, 2018
Gene Model: July 25th, 2018
4 months agodef1 defensin-like protein1:
10.03
GRMZM2G368890
Dowd, P; Johnson, ET. 2018. Agri Gene 9:16-23     Reference: July 25th, 2018
Gene Product: July 25th, 2018
Gene Model: June 10th, 2016
4 months agouce12 ubiquitin conjugating enzyme12:
8.03
GRMZM2G015287
Zhu, X-M et al. 2018. Frontiers Plant Sci 9:966     Reference: July 25th, 2018
Variation: March 31st, 2005
Gene Model: July 25th, 2018
4 months agoyab10 yabby homolog10:
1.07
   Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: October 16th, 2015
Variation: March 23rd, 2009
Recommended by Marty Sachs:
March 7th, 2007
4 months agoba1 barren stalk1: ear shoots and most tassel branches and spikelets absent
3.06
   Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: July 19th, 2012
Variation: March 18th, 2015
4 months agora1 ramosa1: ear and tassel many-branched; tassel branches taper to tip
7.02
   Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: April 11th, 2007
Variation: August 20th, 2010
4 months agora3 ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis
7.06
   Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: September 15th, 2013
Variation: December 3rd, 2010
4 months agotu1 tunicate1: dominant Tu1 ears develop long glumes enclosing individual kernels; tassels develop large, coarse glumes and sex reversal; both inflorescences become grossly vegetative and sterile in homozygotes
4.08 - 4.08
GRMZM2G370777
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: June 12th, 2012
Variation: February 3rd, 2011
Gene Model: May 9th, 2012
4 months agonot1 neighbor of tga1: compared to tga1, expressed much higher in maize than teosinte; INDEL probe (Preston et al 2011)
 
AC233751.1_FG002
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
4 months agobhlh81 bHLH-transcription factor 81: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: July 24th, 2018
4 months agozfl1 zea floricaula/leafy1: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
10.06
   Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Variation: February 20th, 2007
4 months agozfl2 Zea floricaula leafy2: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
2.02
   Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Variation: October 9th, 2014
4 months agosos1 Suppressor of sessile spikelets1: dominant Sos1 suppresses sessile spikelets in ear primordia and in tassel; reduced tassel branching - contrasts to teosinte ears, where the pedicellate rather than the sessile spikelet is lacking (compare pd1 pd2, unpaired rows due to failure of pedicillate spikelets)
4.02
   Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Variation: September 1st, 2003
4 months agozag6 agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis.
 
GRMZM2G026223
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Variation: June 9th, 2014
Gene Model: June 9th, 2014
4 months agoyab12 C2C2-YABBY-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G085873
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: October 16th, 2015
Gene Model: October 16th, 2015
4 months agoyab6 C2C2-YABBY-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G074124
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: October 16th, 2015
Gene Model: July 3rd, 2012
4 months agocopt1 copper transporter1:
 
GRMZM2G003179
Wang, HL et al. 2018. PLoS One 13:e0199081     Reference: July 24th, 2018
Gene Product: July 24th, 2018
Gene Model: July 24th, 2018
4 months agocopt2 copper transporter2:
 
GRMZM2G042412
Wang, HL et al. 2018. PLoS One 13:e0199081     Reference: July 24th, 2018
Gene Product: July 24th, 2018
Gene Model: July 24th, 2018
4 months agocopt3 copper transporter3:
 
GRMZM2G317696
Wang, HL et al. 2018. PLoS One 13:e0199081     Reference: July 24th, 2018
Gene Product: July 24th, 2018
Gene Model: July 24th, 2018
4 months agoasg62  :
1.07
GRMZM2G379237
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: February 15th, 2017
Gene Model: July 24th, 2018
4 months agoumc1076  :
1.05
GRMZM2G152526
    Variation: September 1st, 2003
Gene Model: July 23rd, 2018
4 months agoole1 oleosin1: major protein from lipid bodies, cDNA and genomic clones; SSR umc1185
2.03
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: July 23rd, 2018
Variation: February 20th, 2015
4 months agortcs1 rootless concerning crown and seminal roots1: root system reduced solely to a primary root yet plants can be carried to seed; cyclin cDNAs absent; naphthalene acetic acid induces adventitious roots
1.02
GRMZM2G092542
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Gene Product: October 5th, 2009
Variation: October 5th, 2009
Gene Model: July 23rd, 2013
4 months agoslr1 short lateral root1:
 
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: October 5th, 2009
4 months agoslr2 short lateral root2:
 
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: October 5th, 2009
4 months agort1 rootless1: secondary roots few or absent
3.04
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: September 1st, 2003
4 months agolrt1 lateral rootless1: few lateral root primordia form in primary and seminal roots, none proliferate; no response to naphthalene acetic acid or indole acetic acid; responds to indole butyric acid and to S-nitroso-N-acetylpenicillamine, a nitric oxide (NO) donor (Schlicht et al 2013)
2.00 - 2.03
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: September 1st, 2003
4 months agolrp1 lateral root primordia1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141   AT5G12330 (TAIR) Reference: July 19th, 2018
Gene Product: April 27th, 2015
4 months agorth1 roothair defective1: roothairs do not elongate in rth1 homozygotes; plants are dwarfed and appear nutrient deficient; genomic sequence
1.09
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: April 2nd, 2007
4 months agorth2 roothair defective2: root hairs elongate 1/5-1/4 of normal; plants are vigorous and show little nutritional deficiency
5.04 - 5.09
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: September 1st, 2003
4 months agorth3 roothair defective3: like rth1, but "stocking cap" roothair initials under electron microscope
1.03
   Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: June 30th, 2012
4 months agorboh1 respiratory burst oxidase1: mutant displays defects in root hair initiation and elongation manifested by a reduced density and length of root hairs.
3.06
GRMZM2G426953
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Gene Product: July 15th, 2013
Variation: June 7th, 2014
Gene Model: July 2nd, 2013
4 months agorum1 rootless with undetectable meristems1: primordia for seminal roots and for laterals on the primary root absent
 
GRMZM2G037368
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Gene Product: June 16th, 2014
Variation: June 16th, 2014
Gene Model: June 16th, 2014
4 months agortcl1 RTCS-like1: homologous to rtcs1
9.07
AC149818.2_FG009
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: January 20th, 2016
Gene Model: May 18th, 2012
4 months agorul1 rum1-like1:
 
GRMZM2G163848
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Variation: November 18th, 2011
Gene Model: November 17th, 2011
4 months agorth6 roothairless6: mutant roothairs do not elongate; encodes a D-type cellulose synthase
 
GRMZM2G436299
Bray, AL; Topp, CN. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy141     Reference: July 19th, 2018
Gene Product: October 7th, 2016
Variation: October 7th, 2016
Gene Model: October 7th, 2016
4 months agoumc1153  :
5.09
GRMZM2G133764
    Variation: September 1st, 2003
Gene Model: July 16th, 2018
4 months agonbcs18 nucleobase:cation symporter18:
7.02
GRMZM2G414813
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agoms22 male sterile22: pollen mother cells degenerate
7.02
GRMZM2G442791
Gao, YG et al. 2018. PLoS One 13:e0199437     Reference: July 14th, 2018
Gene Product: August 12th, 2012
Variation: February 12th, 2013
Gene Model: August 11th, 2012
4 months agolpe1 leaf permease1: pale green (lpe1-m1 mutable) under high light, green in low light; defective chloroplasts
1.09
GRMZM5G858417
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: September 1st, 2003
Variation: March 29th, 2012
Gene Model: February 17th, 2015
4 months agoumc1792  :
5.08
GRMZM5G852886
    Variation: September 1st, 2003
Gene Model: July 14th, 2018
4 months agonbcs1 nucleobase:cation symporter1:
1.05
GRMZM2G041050
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: December 17th, 2016
4 months agonbcs15 nucleobase:cation symporter15:
5.00
GRMZM2G420823
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Variation: September 1st, 2003
Gene Model: June 14th, 2018
4 months agonbcs2 nucleobase:cation symporter2: similar to Arabidopsis nucleobase-ascorbate transporter 6
1.07
GRMZM2G115635
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: September 7th, 2017
4 months agonbcs5 nucleobase:cation symporter5:
2.06
GRMZM2G100484
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Variation: July 29th, 2004
Gene Model: January 31st, 2018
4 months agoAY110182  :
5.08
GRMZM2G017923
    Variation: July 29th, 2004
Gene Model: July 14th, 2018
4 months agoAY110413  :
5.08
GRMZM2G089466
    Variation: July 29th, 2004
Gene Model: July 14th, 2018
4 months agonbcs4 nucleobase:cation symporter4:
 
GRMZM2G045781
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs6 nucleobase:cation symporter6:
 
GRMZM2G171880
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs7 nucleobase:cation symporter7:
 
   Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
4 months agonbcs8 nucleobase:cation symporter8:
 
GRMZM2G068220
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs9 nucleobase:cation symporter9:
 
GRMZM2G119970
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs10 nucleobase:cation symporter10:
 
GRMZM2G085420
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs11 nucleobase:cation symporter11:
 
GRMZM2G358791
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs12 nucleobase:cation symporter12:
 
GRMZM2G080387
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs13 nucleobase:cation symporter13:
 
   Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
4 months agonbcs14 nucleobase:cation symporter14:
 
GRMZM2G027608
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs17 nucleobase:cation symporter17:
 
GRMZM2G020580
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs19 nucleobase:cation symporter19:
 
GRMZM2G406315
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs20 nucleobase:cation symporter20:
 
GRMZM5G802881
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs21 nucleobase:cation symporter21:
 
GRMZM2G136872
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs22 nucleobase:cation symporter22:
 
GRMZM2G095611
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs23 nucleobase:cation symporter23:
 
GRMZM2G437859
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs24 nucleobase:cation symporter24:
 
GRMZM2G363292
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
4 months agonbcs16 nucleobase:cation symporter16:
5.06
GRMZM5G812555
Chai, WB et al. 2018. Frontiers Plant Sci 9:856     Reference: July 14th, 2018
Gene Product: July 14th, 2018
Gene Model: July 14th, 2018
5 months agobnlg1118  :
5.07
GRMZM2G152703
    Variation: September 1st, 2003
Gene Model: July 13th, 2018
5 months agogbptf17 GeBP-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.07
GRMZM2G083886
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: July 13th, 2018
5 months agoAY110369  :
5.07
GRMZM2G046407
    Variation: July 29th, 2004
Gene Model: July 13th, 2018
5 months agobnlg609  :
5.06
GRMZM2G076313
    Variation: September 1st, 2003
Gene Model: July 12th, 2018
5 months agoumc1524  :
5.06
AC185464.3_FG003
    Variation: September 1st, 2003
Gene Model: July 12th, 2018
5 months agoumc1680  :
5.06
GRMZM2G057958
    Variation: September 1st, 2003
Gene Model: July 12th, 2018
5 months agoglpdh2 glycerol-3-phosphate dehydrogenase2: Likely encodes glycerol-3-phosphate dehydrogenase per Alexandrov et al.NAD+-dependent type A
8.08
GRMZM2G090747
Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
Variation: May 17th, 2016
Gene Model: May 17th, 2016
5 months agogss1 starch synthase homolog1: endosperm cDNA 5C04B10 (uaz218), similar to pea starch synthase isoform II
5.06
GRMZM2G105791
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: October 7th, 2010
Gene Model: July 12th, 2018
5 months agoglpdh1 glycerol-3-phosphate dehydrogenase1: NAD+-dependent type A
 
GRMZM2G155348
Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
Gene Model: July 11th, 2018
5 months agoglpdh3 glycerol-3-phosphate dehydrogenase3: NAD+-dependent type A
 
GRMZM2G173195
Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
Gene Model: July 11th, 2018
5 months agoglpdh4 glycerol-3-phosphate dehydrogenase4: NAD+-dependent type A
 
   Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
5 months agoglpdh5 glycerol-3-phosphate dehydrogenase5: NAD+-dependent type A
 
GRMZM2G063258
Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
Gene Model: July 11th, 2018
5 months agoglpdh6 glycerol-3-phosphate dehydrogenase6: FAD-dependent type B
 
GRMZM2G446108
Zhao, Y et al. 2018. PLoS One 13:e0200357     Reference: July 11th, 2018
Gene Product: July 12th, 2018
Gene Model: July 11th, 2018
5 months agosbp9 SBP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.01
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp28 SBP-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.07
GRMZM2G058588
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: January 16th, 2018
5 months agosbp6 SBP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.00
GRMZM2G138421
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: June 14th, 2018
5 months agoumc1155  : similar to Arabidopsis phototropic-responsive NPH3-like protein
5.05
GRMZM2G044359
    Variation: September 1st, 2003
Gene Model: July 11th, 2018
5 months agoumc1264  : similar to Arabidopsis Nucleotide-sugar transporter family protein
5.05
GRMZM2G025236
    Variation: September 1st, 2003
Gene Model: July 11th, 2018
5 months agosbp16 SBP-transcription factor16: NCBI: squamosa promoter-binding-like protein 15 Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G169270
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: October 29th, 2016
5 months agosbp2 SBP-domain protein2: cDNA sequence; SSR's umc1573, umc1574, umc1623
4.09
GRMZM2G168229
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: October 8th, 2011
Gene Model: December 18th, 2014
5 months agosbp3 SBP-domain protein3: cDNA sequence with SSR's umc1572, umc1595
6.02
GRMZM2G101499
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: December 18th, 2014
5 months agotsh4 tassel sheath4: tsh4 mutant tassels have one to five long tassel branches, instead of ~13 observed in non-mutant W22. In place of tassel branches, long bract leaves were present, clustered at the base of the tassel.
7.03
GRMZM2G307588
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: October 8th, 2011
Gene Model: October 6th, 2011
5 months agosbp1 SBP-domain protein1: cDNA sequence, SSR's umc1575, umc1624
5.04
GRMZM2G111136
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: October 8th, 2011
Gene Model: December 18th, 2014
5 months agosbp11 SBP-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp13 SBP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp17 SBP-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp18 SBP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp20 SBP-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: February 22nd, 2018
5 months agosbp21 SBP-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258   AT1G27370 (TAIR) Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp22 SBP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp23 SBP-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp24 SBP-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp25 SBP-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp27 SBP-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: December 17th, 2014
5 months agosbp31 SBP-transcription factor 31: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp5 SBP-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agosbp7 SBP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
5 months agoub2 unbranched2: double mutant shows decrease in tassel branch number
 
   Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Variation: December 17th, 2014
5 months agoumc1752  :
5.06
GRMZM2G481755
    Variation: September 1st, 2003
Gene Model: July 11th, 2018
5 months agosbp3 (GRASSIUS) SBP-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.03
GRMZM2G106798
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Gene Model: June 11th, 2018
5 months agosbp12 SBP-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.04
GRMZM2G126827
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Gene Model: June 27th, 2018
5 months agoAY109938  :
5.06
GRMZM2G031952
    Variation: July 29th, 2004
Gene Model: July 11th, 2018
5 months agopac1 pale aleurone color1: recessive, non-lethal, regulates reduced pigment in kernels
5.06
GRMZM2G058432
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Variation: February 23rd, 2013
Gene Model: July 11th, 2018
5 months agosbp19 SBP-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
GRMZM2G163813
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Gene Model: July 11th, 2018
5 months agosbp29 SBP-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM2G067624
Wei, HB et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery258     Reference: July 11th, 2018
Gene Product: December 18th, 2014
Gene Model: July 11th, 2018
5 months agommc0081  :
5.05
GRMZM2G114241
    Variation: September 1st, 2003
Gene Model: July 10th, 2018
5 months agoinvan2 invertase alkaline neutral2:
5.05
GRMZM2G118737
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: September 1st, 2003
Gene Model: July 10th, 2018
5 months agoarodh3 arogenate dehydrogenase3: mutants have retarded vegetative growth and opaque endosperm
6.01
   Holding, DR et al. 2010. J Exp Bot 61:3663-3673     Reference: July 7th, 2018
Gene Product: July 7th, 2018
Variation: July 7th, 2018
5 months agofl2 floury2: endosperm opaque, soft; dosage effect; encodes an abnormal 24kDa alpha-zein, blocked in removal of its signal peptide, preventing transfer to lumen of the endoplasmic reticulummRNA for 22kD zein; in z1c(zp22) cluster
4.03
GRMZM2G397687
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: September 1st, 2003
Variation: October 17th, 2014
Gene Model: December 19th, 2011
5 months agoo1 opaque endosperm1: endosperm starch soft, opaque
4.08 - 4.08
GRMZM2G449909
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: September 1st, 2003
Variation: October 9th, 2017
Gene Model: August 28th, 2012
5 months agoo11 opaque endosperm11: thin, opaque, somewhat shrunken kernels with greyish cast
 
GRMZM2G147685
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3   AT1G49770 (TAIR) Reference: July 7th, 2018
Gene Product: September 14th, 2016
Variation: February 8th, 2018
Gene Model: February 8th, 2018
5 months agoo5 opaque endosperm5: like o1; virescent to yellow or white seedlings
7.02
GRMZM2G142873
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: June 17th, 2011
Variation: August 29th, 2011
Gene Model: September 19th, 2011
5 months agode30 defective endosperm B30: dominant De*-B30 has opaque, high lysine endosperm
7.01 - 7.02
AF546188.1_FG007
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: September 1st, 2003
Variation: September 15th, 2014
Gene Model: September 14th, 2014
5 months agofl4 floury4: semi-dominant opaque mutant that produces small, misshapen, and aggregated protein bodies; encodes member of 19kD α-zein z1A-1 subfamily
 
GRMZM2G353097
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: April 9th, 2014
Variation: April 8th, 2014
Gene Model: April 8th, 2014
5 months agoarodh1 arogenate dehydrogenase1: mutants have retarded vegetative growth and opaque endosperm
 
GRMZM2G084942
Holding, DR et al. 2010. J Exp Bot 61:3663-3673     Reference: July 7th, 2018
Gene Product: July 7th, 2018
Variation: July 7th, 2018
Gene Model: October 4th, 2017
5 months agoarodh2 arogenate dehydrogenase2:
 
GRMZM2G085117
Holding, DR et al. 2010. J Exp Bot 61:3663-3673     Reference: July 7th, 2018
Gene Product: July 7th, 2018
Gene Model: July 7th, 2018
5 months agoarodh4 arogenate dehydrogenase4:
 
GRMZM2G324297
Holding, DR et al. 2010. J Exp Bot 61:3663-3673     Reference: July 7th, 2018
Gene Product: July 7th, 2018
Gene Model: July 7th, 2018
5 months agoufgt2 UDP-flavonol-glycosyltransferase2: mutants are sensitive to salt and drought stresses
 
GRMZM2G117878
Li, Y-J et al. 2018. Ann Bot pp.doi: 10.1093/aob/mcy123     Reference: July 4th, 2018
Gene Product: July 4th, 2018
Variation: July 4th, 2018
Gene Model: July 4th, 2018
5 months agochb101a chromatin remodeling complex subunit B (Swi3):
5.01
GRMZM5G878347
Yu, XM et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0751-8     Reference: June 30th, 2018
Variation: September 1st, 2003
Gene Model: June 30th, 2018
5 months agochb101b chromatin remodeling complex subunit B (Swi3): mybr53 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.10
GRMZM2G047038
Nelissen, H et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00269     Reference: July 2nd, 2015
Variation: September 1st, 2003
Gene Model: June 30th, 2018
5 months agobnlg2323  :
5.04
GRMZM2G121366
    Variation: September 1st, 2003
Gene Model: June 29th, 2018
5 months agoumc1349  :
5.04
GRMZM2G170742
    Variation: September 1st, 2003
Gene Model: June 29th, 2018
5 months agoumc1966  :
5.04 - 5.05
GRMZM2G074017
    Variation: September 1st, 2003
Gene Model: June 29th, 2018
5 months agorht* reducing-height*: dominant short plant mutant
 
   Chen, Q et al. 2018. Genes Genom doi: 10.1007/s13258-018-0716-y     Reference: June 29th, 2018
Variation: June 29th, 2018
5 months agoereb144 AP2-EREBP-transcription factor 144: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.04
GRMZM2G005301
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: June 28th, 2018
5 months agoumc1591  : similar to Arabidopsis protein WAX2
5.04
GRMZM2G083526
    Variation: September 1st, 2003
Gene Model: June 28th, 2018
5 months agobzip89 bZIP-transcription factor 89: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.04
GRMZM2G158313
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: June 28th, 2018
5 months agoumc1990  :
5.04
GRMZM2G120408
    Variation: September 1st, 2003
Gene Model: June 28th, 2018
5 months agocbp4 calmodulin binding protein4: single copy; has no significant sequence homology with cbp2, another maize gene that encodes a calmodulin binding protein;
5.04
GRMZM2G312827
Safadi, F et al. 2000. J Biol Chem 275:35457-35470     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 28th, 2018
5 months agocdc202 cell division cycle202:
5.04
GRMZM2G130425
Zheng, HY et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw195     Reference: November 18th, 2016
Variation: June 28th, 2018
Gene Model: June 28th, 2018
5 months agobnlg1902  :
5.03
AC233959.1_FG003
    Variation: September 1st, 2003
Gene Model: June 27th, 2018
5 months agobnl4.36  :
5.04
GRMZM2G482256
    Variation: September 1st, 2003
Gene Model: June 27th, 2018
5 months agouaz275  : endosperm cDNA 5C02B05 (uaz275) single copy
5.04 - 5.04
GRMZM2G096972
Helentjaris, T et al. 1994. MNL 68:101-104     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 27th, 2018
5 months agomthr1 methionine synthase homolog1: leaf cDNA csu194 similar to E. coli metE
5.02
GRMZM2G112149
Benner, M; Galioto, A; Johnson, J. 1996. Maize Genetics Conference Abstracts 38     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 27th, 2018
5 months agoAY104079  :
5.03
GRMZM2G044348
    Variation: March 7th, 2007
Gene Model: June 27th, 2018
5 months agomch4 maize CRY1 homolog4: Homolog to yeast 40S ribosomal protein S14 gene family
 
GRMZM5G882378
    Variation: October 14th, 2010
Gene Model: June 27th, 2018
5 months agoumc1429  :
5.03
       Variation: June 26th, 2018
5 months agomlo6 barley mlo defense gene homolog6: one of 9 seven-transmembrane homologues to barley powdery mildew defense response gene
5.03
GRMZM2G325653
Devoto, A et al. 2003. J Mol Evol 56: 77-88     Reference: March 16th, 2006
Variation: June 26th, 2018
Gene Model: June 26th, 2018
5 months agoumc1355  :
5.03
GRMZM5G823135
    Variation: September 1st, 2003
Gene Model: June 23rd, 2018
5 months agoumc1447  :
5.03
GRMZM2G137694
    Variation: September 1st, 2003
Gene Model: June 23rd, 2018
5 months agoumc1557a  :
5.03
GRMZM2G133895
    Variation: September 1st, 2003
Gene Model: June 23rd, 2018
5 months agoumc1609  :
5.03
GRMZM2G098793
    Variation: September 1st, 2003
Gene Model: June 23rd, 2018
5 months agoumc2297  :
5.03
GRMZM2G047175
    Variation: September 25th, 2007
Gene Model: June 23rd, 2018
5 months agoAY109995  : similar to Arabidopsis vacuolar-sorting receptor 3
5.03
GRMZM2G303631
    Variation: July 29th, 2004
Gene Model: June 23rd, 2018
5 months agopco105903  :
5.03
GRMZM2G083453
    Variation: September 25th, 2007
Gene Model: June 23rd, 2018
5 months agolox3 lipoxygenase3:
3.06
   Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: January 3rd, 2018
Variation: November 14th, 2014
5 months agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
GRMZM2G315375
Balzan, S et al. 2018. Plant Growth Regulation pp.doi: 10.1007/s10725-018-0412-6     Reference: June 22nd, 2018
Gene Product: May 1st, 2012
Variation: June 22nd, 2018
Gene Model: April 28th, 2012
5 months agocat3 catalase3: electrophoretic mobility, null allele is known; mitochondrial; tetrameric, intralocus hybrid bands occur; SSRs phi006, phi019, phi076, umc1197
4.11
   Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: September 1st, 2003
Variation: March 2nd, 2007
5 months agolox6 lipoxygenase6:
2.02
GRMZM2G040095
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: January 3rd, 2018
Variation: June 11th, 2014
Gene Model: June 10th, 2014
5 months agogst19 glutathione transferase19:
6.04
GRMZM2G335618
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: September 1st, 2003
Variation: August 18th, 2010
Gene Model: July 27th, 2016
5 months agolox1 lipoxygenase1: Full length cDNA is expressed in E. coli (Kim et al. 2003)
3.06
   Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: November 13th, 2014
Variation: July 24th, 2008
5 months agolox5 lipoxygenase5:
5.02
GRMZM2G102760
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: January 3rd, 2018
Variation: April 20th, 2018
Gene Model: June 10th, 2014
5 months agobx13 benzoxazinone synthesis13: encodes a 2-oxoglutarate-dependent dioxygenase that catalyzes the conversion of DIMBOA-Glc into a new benzoxazinoid intermediate (TRIMBOA-Glc) by an uncommon reaction involving a hydroxylation and a likely ortho-rearrangement of a methoxy group.
 
AC148152.3_FG005
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: June 20th, 2016
Variation: June 20th, 2016
Gene Model: June 20th, 2016
5 months agoppo1 polyphenol oxidase1: vegetative meristem cDNA 7C02D02
10.03
GRMZM5G851266
Castano-Duque, L et al. 2018. J Chem Ecol pp.doi: 10.1007/s10886-018-0972-y     Reference: June 22nd, 2018
Gene Product: September 1st, 2003
Variation: January 21st, 2015
Gene Model: January 21st, 2015
5 months agopr1 red aleurone1: changes purple aleurone to red; encodes flavonoid 3'-hydroxylase
5.05
GRMZM2G025832
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: June 20th, 2018
Variation: June 10th, 2011
Gene Model: September 22nd, 2011
5 months agoftfh1 flavonoid 3,5-hydroxylase1:
 
   Liu, XQ et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy110     Reference: June 18th, 2018
Gene Product: June 20th, 2018
5 months agocsu340  :
5.03
GRMZM2G132036
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 19th, 2018
5 months agoumc1597  :
5.03
GRMZM2G124791
    Variation: September 1st, 2003
Gene Model: June 19th, 2018
5 months agospi1 sparse inflorescence1: mutant tassels have fewer branches and spikelets, and its ears are small, with fewer kernels
3.08
GRMZM2G025222
Johnston, R et al. 2015. New Phytol 205:306-315     Reference: February 29th, 2016
Gene Product: June 18th, 2018
Variation: June 24th, 2011
Gene Model: April 24th, 2013
Recommended by Lisa Harper:
October 7th, 2008
5 months agob1 colored plant1: dominant B1 plants have anthocyanin in major plant tissues; some alleles affect aleurone and embryo color; regulates flavonoid enzymes; SSR umc1776
2.03
GRMZM2G172795
Liu, XQ et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy110     Reference: June 18th, 2018
Gene Product: October 13th, 2010
Variation: February 14th, 2013
Gene Model: September 22nd, 2011
5 months agobz2 bronze2: like bz1; anthers not fluorescent; an1-6923 mutation includes deletion for Bz2; encodes a glutathione S-transferase conjugating anthocyanins into the vacuole
1.08
   Liu, XQ et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy110     Reference: June 18th, 2018
Gene Product: September 1st, 2003
Variation: March 31st, 2008
5 months agoc1 colored aleurone1: C1 colored; C1-I dominant colorless; c1 colorless, includes c1-p (pigment inducible by light at germination), c1-n (not inducible)
9.01
   Liu, XQ et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy110     Reference: June 18th, 2018
Gene Product: June 16th, 2015
Variation: March 27th, 2013
5 months agobnlg1046  :
5.03
GRMZM2G152764
    Variation: September 1st, 2003
Gene Model: June 18th, 2018
5 months agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Zhang, ZH et al. 2018. Plant J pp.doi: 10.1111/tpj.13828   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: January 25th, 2018
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
5 months agocol10 C2C2-CO-like-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol13 C2C2-CO-like-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol14 C2C2-CO-like-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol2 C2C2-CO-like-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol3 C2C2-CO-like-transcription factor 3: Functions as a repressor of flowering
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol4 C2C2-CO-like-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol5 C2C2-CO-like-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol6 C2C2-CO-like-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol7 C2C2-CO-like-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol8 C2C2-CO-like-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol9 C2C2-CO-like-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
5 months agocol16 C2C2-CO-like-transcription factor 16:
1.06
GRMZM2G159996
Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
Variation: December 7th, 2016
Gene Model: December 7th, 2016
5 months agofht2 flavanone 3-hydroxylase2:
1.04
GRMZM2G703582
Liu, XQ et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy110     Reference: June 18th, 2018
Gene Product: June 8th, 2012
Gene Model: June 7th, 2017
5 months agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
GRMZM2G091819
Zhang, MS et al. 2017. Genes Genom. DOI: 10.1007/s13258-017-0613-9     Reference: October 2nd, 2017
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
5 months agoyuc2 Yucca2:
 
GRMZM2G159393
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: June 18th, 2018
Gene Model: September 12th, 2012
5 months agoyuc3 Yucca3:
 
GRMZM2G107761
Bernardi, J et al. 2012. Plant Physiol 160:1318-1328     Reference: January 5th, 2015
Gene Product: June 18th, 2018
Gene Model: September 12th, 2012
5 months agoyuc4 Yucca4: up-regulated by light irradiation in the 0-1mm tip region
 
GRMZM2G141383
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
5 months agoyuc6 Yucca6: transcribed in the root apex (0-5mm)
 
GRMZM2G019515
Suzuki, H et al. 2016. J Exp Bot pp.doi: 10.1093/jxb/erw232     Reference: June 17th, 2016
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
5 months agoyuc7 yucca7:
 
GRMZM2G480386
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
5 months agoyuc8 yucca8:
 
GRMZM2G017193
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
5 months agoyuc9 yucca9:
 
GRMZM2G333478
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
5 months agocct2 CO CO-LIKE TIMING OF CAB1 protein domain2: photoperiod response locus; confers later flowering in teosintes under longer day lengths; knockout mutant causes early flowering under long days
 
GRMZM2G004483
Jin, ML et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12632     Reference: January 11th, 2018
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: December 27th, 2017
5 months agocol17 C2C2-CO-like-transcription factor 17:
 
GRMZM2G176173
Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
5 months agocol18 C2C2-CO-like-transcription factor 18:
 
GRMZM2G148772
Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
5 months agocol19 C2C2-CO-like-transcription factor 19:
 
GRMZM2G092363
Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
5 months agochi5 chalcone flavanone isomerase5:
5.04
GRMZM2G311919
Liu, XQ et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy110     Reference: June 18th, 2018
Gene Product: May 8th, 2012
Gene Model: June 18th, 2018
5 months agocol15 C2C2-CO-like-transcription factor 1:
1.04
GRMZM2G134671
Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
5 months agoyuc5 Yucca5: transcribed in the root apex (0-5mm)
7.02
GRMZM2G132489
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
5 months agoconz1 constans1: homologous to photoperiod genes constans (co) from Arabiodopsis and heading date 1 (hd1) in rice. (Miller 2008)
9.03
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
Variation: July 28th, 2008
5 months agobnlg1879  :
5.01
GRMZM5G811408
    Variation: September 1st, 2003
Gene Model: June 16th, 2018
5 months agoiaa22 Aux/IAA-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
GRMZM2G128421
Ludwig, YC et al. 2014. PLoS One 9:e107346     Reference: September 10th, 2014
Variation: September 1st, 2003
Gene Model: June 16th, 2018
5 months agocol12 2C2-CO-like-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: zinc finger protein CONSTANS-LIKE 16
5.07
GRMZM2G041991
Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: September 1st, 2003
Variation: March 31st, 2017
Gene Model: March 31st, 2017
5 months agobnlg565  : similar to Arabidopsis folate transporter 1
5.01
GRMZM5G840435
    Variation: September 1st, 2003
Gene Model: June 15th, 2018
5 months agoga2 gametophyte factor2: Ga2 pollen grains are competitively superior to ga2 on Ga2 silks.
5.04
   Wang, M et al. 2018. Int J Mol Sci 19:E1757     Reference: June 15th, 2018
Variation: September 29th, 2016
5 months agowtf2 what's this factor2:
5.01
AC210013.4_FG013
  At5g62990 (TAIR)
LOC_Os04g24710 (MSU/TIGR)
Variation: September 1st, 2003
Gene Model: June 15th, 2018
5 months agomyb37 MYB-transcription factor 37: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.01
GRMZM2G455869
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: June 15th, 2018
5 months agoshai1 shohai1: loss of function mutants cause variable morphological defects in the embryo including small scutellum, shoot axis bifurcation and arrest during early organogenesis
 
   Mimura, M et al. 2018. Plant J pp.doi: 10.1111/tpj.13996     Reference: June 15th, 2018
Gene Product: June 15th, 2018
Variation: June 15th, 2018
5 months agoumc1679  :
5.01
AC210013.4_FG018
    Variation: September 1st, 2003
Gene Model: June 15th, 2018
5 months agozmm15 Zea mays MADS-box 15:
5.01
GRMZM2G553379
Muenster, T et al. 2002. Maydica 47:287-301     Reference: May 8th, 2012
Variation: June 15th, 2018
Gene Model: June 15th, 2018
5 months agoumc107b(croc)  :
5.01
GRMZM2G090172
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: June 15th, 2018
5 months agommp43  :
5.01
GRMZM2G090573
    Variation: June 15th, 2018
Gene Model: June 15th, 2018
5 months agoAY109733  :
5.01
GRMZM2G130544
    Variation: July 29th, 2004
Gene Model: June 15th, 2018
5 months agocrti3 carotene isomerase3: enclodes carotene isomerase
5.00
GRMZM2G144273
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: June 14th, 2018
5 months agoarf1 ADP-ribosylation factor homolog1: cDNA similar to ARF family of GTP binding proteins
5.00
GRMZM2G395844
Verwoert, IIGS; Brown, A; Slabas, AR; Stuitje, AR. 1995. Plant Mol Biol 27:629-633     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 14th, 2018
5 months agoca3p4 CCAAT-HAP3-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, BM et al. 2018. Frontiers Plant Sci 9:709     Reference: June 14th, 2018
Gene Product: August 9th, 2016
6 months agoumc1253  :
5.00
GRMZM2G084164
    Variation: September 1st, 2003
Gene Model: June 13th, 2018
6 months agoumc1325  :
5.00
GRMZM2G144109
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 13th, 2018
6 months agoumc1445  :
5.00
GRMZM2G121840
    Variation: September 1st, 2003
Gene Model: June 13th, 2018
6 months agoAI676903  :
5.00
GRMZM5G862317
    Variation: July 29th, 2004
Gene Model: June 13th, 2018
6 months agoAY110625  :
5.00
GRMZM2G305216
    Variation: September 25th, 2007
Gene Model: June 13th, 2018
6 months agoincw1 cell wall invertase1: full-length cDNA, similar to tobacco and carrot cell-wall invertase; Northerns specific to cell suspension and developing endosperm 28-32 DAP; expressed protein cross-reacts with antibodies to carrot cell-wall invertase; low copy number
5.04
   Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: May 27th, 2015
6 months agomn1 miniature seed1: small, somewhat defective kernel, fully viable; invertase reduced
2.04
   Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: April 13th, 2015
6 months agoincw3 invertase cell wall3: genomic sequence (GenBank); SSR umc1053
10.04
   Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: October 7th, 2015
6 months agoincw4 invertase cell wall4: genomic sequence (Genbank)similar to Arabidopsis beta-fructofuranosidase, insoluble isoenzyme CWINV3
2.01
GRMZM2G119941
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: May 23rd, 2005
Gene Model: May 27th, 2015
6 months agoinvan7 invertase alkaline neutral7:
1.03
GRMZM2G084940
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: August 11th, 2017
6 months agoivr1 invertase1: cDNA, genomic clones similar to soluble plant invertase; induced by sugar depletion
2.03
   Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: September 1st, 2003
6 months agoinvan5 invertase alkaline neutral5:
2.05
GRMZM2G115451
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoincw5 invertase cell wall5:
 
GRMZM2G095725
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5   LOC_Os04g33740 (MSU/TIGR) Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: August 16th, 2017
Gene Model: August 16th, 2017
6 months agoivr3 invertase3:
 
GRMZM2G463871
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoincw6 invertase cell wall6:
 
GRMZM2G018692
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoincw7 invertase cell wall7:
 
GRMZM2G018716
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoinvan1 invertase alkaline neutral1:
 
GRMZM2G136139
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoinvan3 invertase alkaline neutral3:
 
GRMZM2G170842
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoinvan4 invertase alkaline neutral4:
 
GRMZM2G007277
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoinvan6 invertase alkaline neutral6:
 
GRMZM2G477236
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoinvan8 invertase alkaline neutral8:
 
GRMZM2G040843
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoinvan9 invertase alkaline neutral9:
 
GRMZM2G022782
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoinvan10 invertase alkaline neutral10:
 
GRMZM2G084694
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 months agoincw8 invertase cell wall8:
3.05
GRMZM2G174249
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: September 25th, 2007
Gene Model: June 12th, 2018
6 months agoivr2 invertase2: genomic and cDNA for soluble invertase, single band on Southerns, upregulated by increased carbohydrate levels
5.03
   Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: May 18th, 2012
6 months agoumc42a  :
4.05
GRMZM2G038046
Doebley, JF et al. 1992. MNL 66:95     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 11th, 2018
6 months agobhlh141 bHLH-transcription factor 141: similar to Arabidopsis transcription factor bHLH78Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.03
GRMZM2G080168
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: June 11th, 2018
Gene Model: June 11th, 2018
6 months agoppr346 pentatricopeptide repeat protein346:
 
GRMZM2G129783
Yu, HQ et al. 2018. Physiology and Molecular Biology of Plants pp.doi: 10.1007/s12298-018-0546-z     Reference: June 11th, 2018
Gene Product: December 27th, 2016
Gene Model: June 11th, 2018
6 months agoumc1963  :
4.04
GRMZM2G171311
    Variation: September 1st, 2003
Gene Model: June 10th, 2018
6 months agoabi47 ABI3-VP1-transcription factor 47: Grimault named this locus ZmAFL6 by homology to Arabidopsis, 2015Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models
4.08
GRMZM2G125596
Grimault, A et al. 2015. Plant Sci 236:116-125     Reference: July 29th, 2015
Gene Product: July 29th, 2015
Gene Model: June 10th, 2018
6 months agobm3 brown midrib3: like bm1; has lowered activity of caffeic acid O-methyl transferase; application: modified lignin has improved digestibility in ruminants; silage corn with bm3 is in production. However, bm3 results in weaker stalks, reduced stover and grain yield, and in some cases reduced maturity; these effects appear genotype-specific
4.04
GRMZM5G814904
Wu, ZY et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery208     Reference: June 4th, 2018
Gene Product: February 16th, 2011
Variation: October 27th, 2015
Gene Model: June 9th, 2018
6 months agotcrr1 transfer cell response regulator1: basal endosperm transfer cell specific transcript; encoded protein is found other cells, the conducting cells above the transfer layer, and immature cells adjacent to the transfer layer
4.05
GRMZM2G016145
Huang, J et al. 2018. BMC Plant Biology 18:111     Reference: June 9th, 2018
Variation: December 31st, 2015
Gene Model: December 31st, 2015
6 months agovp1 viviparous1: embryo fails to become dormant, viable if transplanted; some alleles dormant; chlorophyll and carotenoids unaffected; anthocyanins in aleurone suppressed (aka vp4); cDNA
3.05
   Huang, J et al. 2018. BMC Plant Biology 18:111     Reference: June 9th, 2018
Gene Product: July 29th, 2015
Variation: August 22nd, 2013
6 months agomet5 DNA methyl transferase5:
2.02
GRMZM2G005310
Fu, FF et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00053     Reference: June 9th, 2018
Gene Product: April 6th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
6 months agoumc1707  :
4.11
GRMZM2G167149
    Variation: June 7th, 2018
Gene Model: June 8th, 2018
6 months agoumc1757  :
4.01
GRMZM5G877647
    Variation: September 1st, 2003
Gene Model: June 8th, 2018
6 months agocyp25 cytochrome P-450 25:
4.09
GRMZM2G070508
Yoneyama, K et al. 2018. New Phytol pp.doi: 10.1111/nph.15055     Reference: February 27th, 2018
Gene Product: February 26th, 2018
Gene Model: June 8th, 2018
6 months agoumc1953  :
4.05
GRMZM2G166711
    Variation: September 1st, 2003
Gene Model: June 8th, 2018
6 months agoumc19  :
4.07
GRMZM2G125838
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 8th, 2018
6 months agoumc1101  :
4.09
GRMZM2G041310
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agocsd2 CSD-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.10
GRMZM2G389768
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agoumc1132  : similar to Arabidopsis RNA recognition motif-containing protein
4.08
GRMZM2G131957
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agoumc1303  :
4.05
GRMZM2G377165
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agoumc1346  :
4.05
GRMZM2G366392
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agoumc1650  :
4.09
GRMZM2G121495
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agoumc1652  :
4.04
GRMZM5G852329
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agotrpp4 trehalose-6-phosphate phosphatase4:
4.08
GRMZM2G151044
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: September 15th, 2013
Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agoumc1669  :
4.01
GRMZM2G037472
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agoumc1702  : similar to Arabidopsis RNA recognition motif-containing protein
4.05
GRMZM2G125529
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agoumc15a  :
4.08
GRMZM2G013128
Albertsen, MC et al. 1996. MNL 70:30     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 7th, 2018
6 months agopif3 phytochrome interacting factor3: ortholog of Arabidopsis PIF3; nuclear localized protein; transgenic expression in rice suggest role in stress response (Gao Y et al 2015)
 
GRMZM2G387528
Gao, Y et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0739-4   AT1G09530 (TAIR)
LOC_Os05g04740 (MSU/TIGR)
Reference: June 6th, 2018
Gene Product: September 14th, 2016
Gene Model: May 26th, 2015
6 months agobm2 brown midrib2: brown pigmentation in the leaf midrib and tissues accumulate reduced levels of lignin; like bm1cDNA complements yeast met12 met13 mutant; one of two or more loci, second locus may be on chromosome 5 near gln4
1.11
GRMZM2G099363
Wu, ZY et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery208     Reference: June 4th, 2018
Gene Product: August 28th, 2012
Variation: November 30th, 2013
Gene Model: November 30th, 2013
6 months agovp8 viviparous8: embryo fails to become dormant; chlorophyll and carotenoids unaffected; small, pointed-leaf seedlings
1.11
   Li, JP et al. 2018. J Integrative Agriculture doi: 10.1016/S2095-3119(18)61959-8     Reference: June 4th, 2018
Gene Product: November 29th, 2012
Variation: June 4th, 2018
6 months agoomt2 Caffeoyl CoA O-methyltransferase2:
9.02
GRMZM2G099363
Wu, ZY et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery208     Reference: June 4th, 2018
Gene Product: January 5th, 2014
Variation: May 13th, 2016
Gene Model: September 17th, 2014
6 months agopip1a plasma membrane intrinsic protein1:
2.03
GRMZM2G174807
Zhou, L et al. 2018. PLoS One 13:e0198639     Reference: June 2nd, 2018
Gene Product: September 1st, 2003
Variation: June 6th, 2005
Gene Model: October 29th, 2014
6 months agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
   Burkhow, SJ et al. 2018. Plant Methods 14:37     Reference: June 1st, 2018
Gene Product: December 13th, 2011
Variation: March 4th, 2014
6 months agogst2 glutathione S-transferase2: safener-induced; heterodimer; 2 map sites have been reported on chr 8 and 10
10.03
GRMZM2G132093
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: July 7th, 2010
Gene Model: October 29th, 2015
6 months agomrpa1 multidrug resistance protein associated1: ATP-binding cassette (ABC) transporter
2.09
GRMZM2G113203
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Variation: July 30th, 2013
Gene Model: February 6th, 2015
6 months agogst5 glutathione transferase5: cDNA, safener-induced; high activity with fluorodifen herbicide
1.11
GRMZM2G308687
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
6 months agogst6 glutathione transferase6: cDNA, functionally expressed in E. coli
7.01
GRMZM2G129357
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
6 months agogsht1 glutathione transporter1:
 
GRMZM2G421491
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: April 23rd, 2013
Gene Model: April 23rd, 2013
6 months agoelfa9 elongation factor 1-alpha9: shares 89-99% nucleotide sequence identity with genes elf1a to alf1g (aka clones eEF1Aa to eEF1Ag).
9.03
GRMZM2G153541
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: April 14th, 2014
Gene Model: April 15th, 2014
6 months agocyp15 cytochrome P450 15: encodes CYP97B
4.09
GRMZM2G010221
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: April 29th, 2013
Gene Model: May 31st, 2018
6 months agogst12 glutathione S-transferase12: One of 12 Type I GSTs typed by sequence similarity
1.01
GRMZM2G096269
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: March 17th, 2006
Gene Model: July 27th, 2016
6 months agogst27 glutathione transferase27:
8.05
GRMZM2G077206
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: August 20th, 2010
Gene Model: October 9th, 2014
6 months agogst31 glutathione transferase31: glutathione S-transferase subunit 31; matches PCO132874 (in silico from AF244696) placed by overgo on chromosome 1
1.01
GRMZM2G475059
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: August 21st, 2010
Gene Model: April 27th, 2016
6 months agogst1 glutathione-S-transferase1: presence-absence of isozyme bands between inbred lines, members of a family of polymorphic bands; transcripts correlate with dimer isoforms; single copy in Southerns; SSRs phi080, phi015, umc1069
8.08 - 8.09
   Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
6 months agogst4 glutathione S-transferase4: constitutive and major subunit;amino acid sequence, cDNA sequence, transgenic expression, single or low copy gene, SSR phi073.
3.05
   Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: August 17th, 2010
6 months agomyb19 MYB-transcription factor 19: myb sequence homology; moderate copy number
4.06
GRMZM5G833253
Agarwal, T et al. 2016. Sci. Rep. 6:28502     Reference: June 23rd, 2016
Gene Product: July 25th, 2017
Variation: September 1st, 2003
Gene Model: May 30th, 2018
6 months agocdpk29 calcium dependent protein kinase29: pollen-specific expression; involved in the regulation of pollen germination and tube extension
 
GRMZM2G332660
Li, J et al. 2018. PLoS One 13:e0195787     Reference: May 30th, 2018
Gene Product: December 3rd, 2013
Gene Model: May 30th, 2018
6 months agocdpk2 calcium dependent protein kinase2: genomic and cDNA clones; genomic sequence similar to plant CDPK; pollen-specific expression; possibly two copies (Southern blot); antisense oligonucleotides disrupt pollen tubes
2.05
GRMZM2G365815
Li, J et al. 2018. PLoS One 13:e0195787     Reference: May 30th, 2018
Gene Product: December 3rd, 2013
Variation: November 21st, 2013
Gene Model: March 31st, 2015
6 months agoerd3 early responsive to dehydration3: tissue-specific expression; induced by abiotic stress treatments
 
GRMZM2G144155
Song, XQ et al. 2018. Iranian J Biotech 16:e1593   AT4G19120 (TAIR) Reference: May 29th, 2018
Gene Product: May 29th, 2018
Gene Model: May 29th, 2018
6 months agocpd1 carbohydrate partitioning defective1: semi-dominant mutant associated with reduced carbohydrate transport, including chlorosis and excessive starch and soluble sugars in leaves
 
   Julius, BT et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery203     Reference: May 26th, 2018
Variation: May 26th, 2018
6 months agocah2 carbonic anhydrase2: with cah1 promotes leaf CO2 availability for photosynthesis (Studer et al 2014)
 
GRMZM2G348512
Kolbe, AR et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00176     Reference: May 25th, 2018
Gene Product: August 5th, 2014
Variation: May 25th, 2018
Gene Model: July 31st, 2014
6 months agocah1 carbonic anhydrase1: C4 carbonic anhydrase; higher transcripts in mesophyll cells (Tausta 2014); double mutants with cah2 virutally remove this activity from leaf (Studer et al 2014).
 
GRMZM2G121878
Kolbe, AR et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00176     Reference: May 25th, 2018
Gene Product: August 5th, 2014
Variation: May 25th, 2018
Gene Model: July 31st, 2014
6 months agoct2 compact plant2: semi-dwarf plant, 1/3 height; shortened internodes; club tassel, fasciated ear
1.01 - 1.02
GRMZM2G064732
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: September 16th, 2013
Variation: September 20th, 2013
Gene Model: September 16th, 2013
6 months agopep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
   Qu, MN et al. 2018. Sci. Rep. 8:7849     Reference: May 21st, 2018
Gene Product: September 1st, 2003
Variation: May 11th, 2018
6 months agotd1 thick tassel dwarf1: shortened plants, fasciated ears, increased spikelet density in tassel
5.03
GRMZM2G300133
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: October 22nd, 2012
Variation: October 23rd, 2012
Gene Model: October 22nd, 2012
6 months agomdh6 malate dehydrogenase6: mesophyll cells, C4 photosynthesis; a second copy may not function in photosynthesis
1.07
GRMZM2G129513
Qu, MN et al. 2018. Sci. Rep. 8:7849     Reference: May 21st, 2018
Gene Product: September 23rd, 2014
Variation: August 31st, 2010
Gene Model: October 24th, 2013
6 months agome3 NADP malic enzyme3: chloroplast C4-photosynthesis, delivers CO2 to ribulose bisphosphate carboylase
3.02
   Qu, MN et al. 2018. Sci. Rep. 8:7849     Reference: May 21st, 2018
Gene Product: August 21st, 2014
Variation: September 1st, 2003
6 months agofea2 fasciated ear2: ear fasciated, broadened and flattened at the tip; rows irregular; similar to CLAVATA 2 of Arabidopsis thaliana
4.05
   Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: December 20th, 2004
Variation: February 11th, 2013
6 months agofea3 fasciated ear3: ear tip broad and branched, typically splitting and showing ring fasciation to form a hollow ear.
 
GRMZM2G166524
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35   At3g25670 (TAIR)
LOC_Os01g02060 (MSU/TIGR)
Reference: May 21st, 2018
Gene Product: May 21st, 2016
Variation: May 18th, 2016
Gene Model: May 18th, 2016
6 months agofcp1 fon2-like cle protein1: mutants have a fasciated ear phenotype
 
GRMZM2G165836
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35   LOC_Os04g39770 (MSU/TIGR)
Os04g0473800 (Gramene)
Reference: May 21st, 2018
Gene Product: May 21st, 2016
Variation: May 22nd, 2016
Gene Model: May 21st, 2016
6 months agocrn1 coryne1: involved in shoot apical meristem (SAM) development; functions downstream of fea2; mutants develop fasciated ears
 
GRMZM2G032132
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35   AT5G13290 (TAIR) Reference: May 21st, 2018
Gene Product: January 24th, 2013
Gene Model: May 21st, 2018
6 months agogif1 growth-regulating-factor-interacting factor1: mutants are semi-dwarf with narrow leaves and fasciated inflorescence meristems
1.10
GRMZM2G180246
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35   AT5G28640 (TAIR)
LOC_Os03g52320 (MSU/TIGR)
Reference: May 21st, 2018
Gene Product: July 6th, 2015
Variation: February 6th, 2018
Gene Model: July 6th, 2015
6 months agodcl101 dicer-like 101: mutant plants have 'fuzzy tassel' and reduced stature.
1.01
GRMZM2G040762
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: September 5th, 2006
Variation: December 4th, 2014
Gene Model: November 12th, 2014
6 months agomtl1 metallothionein1: genomic clone, transcriptional and translation start sites mapped, Northern blots, similar to other class-I metallothioneins, root specific; SSR phi072, umc1008
4.00
GRMZM2G164229
Duan, LA et al. 2018. Biometals doi: 10.1007/s10534-018-0100-z     Reference: May 17th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 9th, 2015
6 months agobrd1 brassinosteroid-deficient dwarf1: Mutant plants have essentially no internode elongation and exhibit no etiolation response when germinated in the dark.
 
GRMZM2G103773
Castorina, G et al. 2018. Ann Bot pp.doi: 10.1093/aob/mcy047     Reference: May 16th, 2018
Gene Product: February 18th, 2012
Variation: March 5th, 2012
Gene Model: February 15th, 2012
6 months agomdm1 maize dwarf mosaic virus resistance1: dominant Mdm1 plants resistant
6.01
   Gustafson, T et al. 2018. Crop Sci pp.doi: 10.2135/cropsci2017.11.0675     Reference: May 15th, 2018
Variation: September 1st, 2003
6 months agowox2a WUSCHEL-related homeobox 2a`: embryonic transcription factor (Nardmann et al 2007)
 
   Ma, LL et al. 2018. Frontiers Plant Sci 9:561     Reference: May 15th, 2018
Gene Product: August 25th, 2017
7 months agodv1 divergent spindle1: chromosomes unoriented at metaphase I; partial male and female sterility; encodes a kinesin-14A motor protein
2.02
GRMZM2G114861
Gicking, AM et al. 2018. FEBS Lett pp.doi: 10.1002/1873-3468.13094     Reference: May 14th, 2018
Gene Product: November 10th, 2017
Variation: August 17th, 2016
Gene Model: August 13th, 2014
7 months agomatl1 matrilineal1: encodes a pollen-specific phospholipase; novel edits lead to a 6.7% haploid induction rate
 
GRMZM2G062320
Tian, XL et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery177/4995035     Reference: May 12th, 2018
Gene Product: March 14th, 2017
Variation: February 10th, 2017
Gene Model: January 25th, 2017
7 months agogln6 glutamine synthetase6: cytosolic GS1-1 isoform, gene specific cDNA probe, 6-member nuclear gene family
1.02 - 1.03
GRMZM2G050514
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: December 7th, 2012
Gene Model: August 7th, 2014
7 months agogdh1 glutamic dehydrogenase1: electrophoretic mobility; null allele is known (cold sensitivity); intra/interlocus hybrid bands occur - merge with GenBank sequences inferred by overgo map location matches
1.11
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: August 7th, 2006
7 months agogdh2 glutamic dehydrogenase2: electrophoretic mobility; intralocus hybrid bands occur
10.02 - 10.04
GRMZM2G427097
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: October 6th, 2015
Gene Model: October 6th, 2015
7 months agonnr2 nitrate reductase2: partial cDNA from seedling root cDNA similar to nitrate reductase
5.07
GRMZM5G878558
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: October 26th, 2010
Gene Model: May 10th, 2018
7 months agonnr1 nitrate reductase(NADH)1: leaf, scutellum cDNA's; flavin and cyt b domains functional in E. coli, may be allelic to nnr3
4.05
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: October 26th, 2010
7 months agoelfa3 elongation factor alpha3: shares high (89-99%) nucleotide sequence identity with genes elf1a to elf1g, with a 99% sequence identity with elf1a.
6.05
GRMZM2G154218
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: April 7th, 2014
Gene Model: July 27th, 2016
7 months agogln2 glutamine synthetase2: cytosolic, GS1-2 isoform, root specific, gene specific cDNA probe, 6-member nuclear gene family; contary to preceding notes, Rastogi et. al., 1998 Plant Cell Phyol. 39:443-446, observed gln2 trancripts primarily in the pedicels but at undetectable levels in roots (TM).
1.09
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
7 months agogln3 glutamine synthetase3: cytosolic GS1-5 isoform, a major species in root; gene specific cDNA probe, 6-member nuclear gene family
9.06
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: December 7th, 2012
7 months agogln4 glutamine synthetase4: cytosolic GS1-3 isoform, major species in both root and leaf, gene specific cDNA probes, 6-member nuclear gene family; SSR phi085
5.06
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
7 months agogln5 glutamine synthetase5: cytosolic GS1-4 isoform, major species in both leaf and root, gene specific cDNA probe, 6-member nuclear gene family
4.06
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: May 30th, 2014
7 months agogln1 glutamine synthetase1: chloroplast, gene specific cDNA probe, GS2 isoform; 6-member nuclear gene family
10.07
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
7 months agonrt2 nitrate transport2:
4.11
GRMZM2G010280
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: May 9th, 2018
Gene Model: May 9th, 2018
7 months agofgs1 ferredoxin-dependent glutamate synthase1: deduced amino acid sequence homologous with E. coli NADPH-glutamate synthase, single copy by Southern blot analysis
7.05
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: July 24th, 2015
7 months agonii2 nitrite reductase2: cDNA homologous to spinach gene, induced by nitrate, putative chloroplast transit peptide, two copies
4.07
GRMZM2G079381
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 10th, 2014
7 months agoasn1 asparagine synthetase1: cDNA sequence 70% identical to asparagine synthetase from Pisum sativum
1.03
GRMZM2G074589
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: May 9th, 2009
Gene Model: December 30th, 2015
7 months agoamt5 ammonium transporter5:
10.04
GRMZM2G164743
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: July 8th, 2013
Gene Model: December 29th, 2017
7 months agoasn2 asparagine synthetase2:
3.09
GRMZM2G093175
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Variation: December 30th, 2015
Gene Model: December 30th, 2015
7 months agoasn3 asparagine synthetase3:
1.03
GRMZM2G053669
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Variation: May 9th, 2009
Gene Model: October 16th, 2015
7 months agoasn4 asparagine synthetase4:
9.06
GRMZM2G078472
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Variation: January 20th, 2016
Gene Model: December 30th, 2015
7 months agoamt1 ammonium transporter1:
 
GRMZM2G175140
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
7 months agoamt2 ammonium transporter2:
 
GRMZM2G028736
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
7 months agocul1 cullin1:
 
GRMZM2G166089
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039     Reference: July 6th, 2017
Gene Product: May 10th, 2018
Gene Model: July 6th, 2017
7 months agonpf2 nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein
 
GRMZM2G161459
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531   AT1G12110 (TAIR) Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
7 months agonpf3 nitrate transporter/peptide transporter family3:
 
GRMZM2G112154
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
7 months agonpf4 nitrate transporter/peptide transporter family4:
 
GRMZM2G161483
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
7 months agonpf5 nitrate transporter/peptide transporter family5:
 
GRMZM2G161483
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
7 months agoamt4 ammonium transporter4:
 
GRMZM2G062024
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: July 8th, 2013
Gene Model: May 10th, 2018
7 months agonnr5 nitrate reductase5:
 
GRMZM2G428027
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
7 months agonnr4 nitrate reductase4:
 
GRMZM2G076723
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
7 months agonii1 nitrate reductase1:
 
GRMZM2G102959
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
7 months agouce9 ubiquitin conjugating enzyme9:
 
GRMZM2G027378
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
7 months agosin2 sin homolog2: similar to yeast SIN3
 
GRMZM2G334457
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
7 months agonpf1 nitrate transporter/peptide transporter family1: encodes a low-affinity nitrate transporter with efflux activity; switches to a high-affinity chloride selective transporter, when supplied chloride.
10.03
GRMZM2G086496
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531   AT1G12110 (TAIR) Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
7 months agobrl3 bri1-like receptor kinase3: Encodes a brassinosteroid insensitive1-like receptor kinase.
4.05
GRMZM2G438007
Kir, G, et al. 2015. Plant Physiol. 0:DOI: 10.1104/pp.15.00367   AT1G55610 (TAIR)
LOC_Os08g25380 (MSU/TIGR)
Reference: August 28th, 2015
Variation: May 9th, 2018
Gene Model: May 9th, 2018
7 months agoakh1 aspartate kinase-homoserine dehydrogenase1: cDNA 77% homologous to carrot threonine-sensitive AK-HSDH bifunctional enzyme
4.05
GRMZM2G437977
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 10th, 2010
Gene Model: May 9th, 2018
7 months agomyb156 MYB-transcription factor 156:
1.04
GRMZM2G147698
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Variation: September 29th, 2010
Gene Model: March 4th, 2016
7 months agopal1 phenylalanine ammonia lyase homolog1: leaf cDNA csu156 similar to rice phenylalanine ammonia lyase, single copy
5.05
   Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Variation: September 24th, 2014
7 months agopal2 phenylalanine ammonia lyase2:
2.04 - 2.04
GRMZM2G441347
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Variation: February 21st, 2017
Gene Model: February 21st, 2017
7 months agopal3 phenylalanine ammonia lyase3: used primers on cDNA from glume bars to PCR out RFLP probe. 190 bp ss-mRNA with homology to phenylalanine ammonia lyase. Mapped minor band to this site.
4.05
GRMZM2G160541
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Variation: September 25th, 2014
Gene Model: September 19th, 2014
7 months agocl13018_1  :
1.05
GRMZM2G135045
    Variation: September 25th, 2007
Gene Model: May 4th, 2018
7 months agocl44168_1  :
2.02
GRMZM2G008060
    Variation: September 25th, 2007
Gene Model: May 4th, 2018
7 months agobm6 brown midrib6: brown midrib leaves similar to bm1
 
   Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Variation: March 5th, 2012
7 months agopal7 phenylalanine ammonia lyase7:
 
GRMZM2G170692
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Gene Model: May 6th, 2016
7 months agopal9 phenylalanine ammonia lyase9:
 
GRMZM2G029048
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Gene Model: May 6th, 2016
7 months agopal5 phenylalanine ammonia lyase5:
 
GRMZM2G081582
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Gene Model: May 6th, 2016
7 months agopal4 phenylalanine ammonia lyase4:
 
GRMZM2G063917
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Gene Model: May 6th, 2016
7 months agopal8 phenylalanine ammonia lyase8:
 
GRMZM2G334660
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Gene Model: May 17th, 2016
7 months agofah1 ferulic acid 5-hydroxylase1: Involved in lignin biosynthesis
 
AC210173.4_FG005
Barriere, Y et al. 2017. Maydica 62:22   AT4G36220 (TAIR)
LOC_Os10g36848 (MSU/TIGR)
Reference: May 4th, 2018
Gene Product: May 4th, 2018
Gene Model: June 23rd, 2016
7 months agofah2 ferulic acid 5-hydroxylase2: Involved in lignin biosynthesis
 
GRMZM2G100158
  AT4G36220 (TAIR)
LOC_Os10g36848 (MSU/TIGR)
Gene Product: May 4th, 2018
Gene Model: May 4th, 2018
7 months agoxlg1 extra-large guanine nucleotide-binding protein1: mutant knockout has reduced plant height; triple mutants are lethal at the seedling stage (Wu et al., 2018)
1.05
GRMZM2G127739
Wu, QY et al. 2018. PLoS Genetics pp.doi: 10.1371/journal.pgen.1007374     Reference: May 1st, 2018
Gene Product: May 1st, 2018
Variation: May 1st, 2018
Gene Model: June 13th, 2017
7 months agogbp2 GTP binding protein2: cDNA sequence similar animal G protein beta-subunits; single copy
1.09
GRMZM2G045314
Wu, QY et al. 2018. PLoS Genetics pp.doi: 10.1371/journal.pgen.1007374     Reference: May 1st, 2018
Gene Product: May 1st, 2018
Variation: January 25th, 2011
Gene Model: July 27th, 2016
7 months agoxlg2 extra-large guanine nucleotide-binding protein2: mutant knockout has reduced plant height; triple mutants are lethal at the seedling stage (Wu et al., 2018)
 
GRMZM2G016858
Wu, QY et al. 2018. PLoS Genetics pp.doi: 10.1371/journal.pgen.1007374     Reference: May 1st, 2018
Gene Product: May 1st, 2018
Variation: May 1st, 2018
Gene Model: May 1st, 2018
7 months agogg2 G-protein gamma subunit2: ortholog of AGG2 (Arabidopsis) and RGG1 (rice)
 
   Wu, QY et al. 2018. PLoS Genetics pp.doi: 10.1371/journal.pgen.1007374   AT3G22942 (TAIR)
LOC_Os03g43480 (MSU/TIGR)
Reference: May 1st, 2018
Gene Product: May 1st, 2018
7 months agogg1 G-protein gamma subunit1: ortholog of AGG1 (Arabidopsis) and RGG2 (rice)
 
GRMZM2G015578
  AT3G63420 (TAIR)
LOC_Os02g04520 (MSU/TIGR)
Gene Product: May 1st, 2018
Gene Model: May 1st, 2018
7 months agoxlg3 extra-large guanine nucleotide-binding protein3: mutant knockout has reduced plant height; triple mutants are lethal at the seedling stage (Wu et al., 2018)
6.01
GRMZM2G429113
Wu, QY et al. 2018. PLoS Genetics pp.doi: 10.1371/journal.pgen.1007374     Reference: May 1st, 2018
Gene Product: May 1st, 2018
Variation: May 1st, 2018
Gene Model: May 1st, 2018
7 months agocts1 citrate synthase1: leaf cDNA csu324
5.04
GRMZM2G063851
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: April 26th, 2018
Variation: June 10th, 2014
Gene Model: June 10th, 2014
7 months agocts2 citrate synthase2: Tandem duplication 27kb downstream of cts3 based on CornCyc
4.09
GRMZM2G064023
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: April 26th, 2018
Gene Model: April 27th, 2018
7 months agomgt12 magnesium transporter12: encodes CorA/MRS2/MGT-type magnesium transporter
 
GRMZM2G420436
Li, HY et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.04.068     Reference: April 28th, 2018
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
7 months agocts3 citrate synthase3: Tandem duplication 27kb upstream of cts2 based on CornCyc
 
GRMZM2G063909
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: April 26th, 2018
Gene Model: April 27th, 2018
7 months agombd120 methyl binding domain120:
6.05
GRMZM2G069254
Springer, N; Kaeppler, SM. 2005. Plant Physiol 138:92-104     Reference: February 3rd, 2010
Gene Product: December 24th, 2015
Variation: April 27th, 2018
Gene Model: July 7th, 2015
7 months agocts4 citrate synthase4:
 
GRMZM2G135588
    Gene Product: April 26th, 2018
Gene Model: April 27th, 2018
7 months agobnlg589  :
4.10
GRMZM2G101920
    Variation: September 1st, 2003
Gene Model: April 25th, 2018
7 months agobnlg1434  :
4.00
GRMZM2G008369
    Variation: September 1st, 2003
Gene Model: April 25th, 2018
7 months agobnl7.65  : Tests with B-A translocations indicate that this probe probably maps to chromosome 4L.
4.08
GRMZM2G138936
Beaumont, VH et al. 1996. Theor Appl Genet 93:606-612     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 25th, 2018
7 months agoanl1 anthocyaninless lethal1: Colorless aleurone; small kernels; embryo inviable
5.03
   Coe, EH. 1987. MNL 61:47     Reference: September 1st, 2003
Variation: April 24th, 2018
7 months agobnl10.05  : B-A translocations indicated the map location was probably 4L, not 3L or 10S.
4.08
GRMZM2G032619
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 24th, 2018
7 months agopki1 protein kinase inhibitor1: endosperm cDNA sequence, contains conserved Zn++ binding motif of yeast protein kinase C inhibitor
1.03
   Wu, LJ et al. 2011. Plant Mol Biol Rep 29:1006-1012     Reference: April 21st, 2018
Gene Product: September 1st, 2003
Variation: October 7th, 2014
7 months agoereb185 AP2-EREBP-transcription factor 185: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, SX et al. 2018. Frontiers Plant Sci 9:395     Reference: April 21st, 2018
Gene Product: April 10th, 2013
7 months agopyl8 pyrabactin resistance-like protein8: plays role in plant drought resistance (He et al., 2018)
8.04
GRMZM2G165567
He, ZH et al. 2018. Frontiers Plant Sci 9:422     Reference: April 21st, 2018
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
7 months agopyl3 pyrabactin resistance-like protein3: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G154987
He, ZH et al. 2018. Frontiers Plant Sci 9:422     Reference: April 21st, 2018
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
7 months agopyl9 pyrabactin resistance-like protein9: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G133631
He, ZH et al. 2018. Frontiers Plant Sci 9:422     Reference: April 21st, 2018
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
7 months agopyl10 pyrabactin resistance-like protein10: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G063882
He, ZH et al. 2018. Frontiers Plant Sci 9:422     Reference: April 21st, 2018
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
7 months agopyl12 pyrabactin resistance-like protein12: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G405064
He, ZH et al. 2018. Frontiers Plant Sci 9:422     Reference: April 21st, 2018
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
7 months agodbf2 DRE-binding protein 2: ereb1 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.04
GRMZM5G889719
Li, SX et al. 2018. Frontiers Plant Sci 9:395     Reference: April 21st, 2018
Gene Product: April 10th, 2013
Gene Model: July 27th, 2016
7 months agoast91 anti-sigma factor antagonist domain of sulfate transporter91:
2.02
GRMZM2G395114
Huang, Q et al. 2018. J Plant Physiol 220:24-33   AT1G23090 (TAIR)
LOC_Os04g55800 (MSU/TIGR)
Reference: November 14th, 2017
Gene Product: April 20th, 2018
Variation: February 2nd, 2018
Gene Model: February 2nd, 2018
7 months agosfp5 sulfate transporter5:
9.02
GRMZM2G444801
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: March 14th, 2018
7 months agolox4 lipoxygenase4:
1.09
GRMZM2G109056
Battilani, P et al. 2018. Mol Plant Pathol pp.doi: 10.1111/mpp.12690     Reference: April 20th, 2018
Gene Product: January 3rd, 2018
Variation: April 20th, 2018
Gene Model: June 10th, 2014
7 months agolox12 lipoxygenase12: single copy, required for resistance to Fusarium stalk and ear rot
3.04
GRMZM2G106748
Battilani, P et al. 2018. Mol Plant Pathol pp.doi: 10.1111/mpp.12690     Reference: April 20th, 2018
Gene Product: January 3rd, 2018
Variation: August 15th, 2014
Gene Model: June 10th, 2014
7 months agosfp2 sulfate transporter2:
 
GRMZM2G080178
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
7 months agosfp6 sulfate transporter6:
 
GRMZM2G158013
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
7 months agosfp7 sulfate transporter7:
 
GRMZM2G068212
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
7 months agosfp3 sulfate transporter3:
1.02
GRMZM2G042171
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
7 months agoo*-QCL3024 opaque*-QCL3024: mutant has opaque/high-lysine endosperm
 
   Sarika, K et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.04.014     Reference: April 19th, 2018
Variation: February 16th, 2013
7 months agomurE1 mureinE1: orthologous to At1g63680Maize ortholog of Arabidopsis MurE. Associates with Plastid Encoded RNA polymerase (PEP). Required for PEP-mediated transcription. (A. Barkan, 2015)
 
GRMZM2G009070
Pfalz, J et al. 2015. New Phytol 206:1024-1037   At1g63680 (TAIR) Reference: December 4th, 2015
Gene Product: April 19th, 2018
Variation: January 22nd, 2015
Gene Model: January 21st, 2015
7 months agonap1 nucleosome assembly protein1:
 
GRMZM2G157019
    Variation: April 19th, 2018
Gene Model: April 19th, 2018
7 months agopdk1 pyruvate, orthophosphate dikinase1: cDNA, genomic and peptide sequences; microsatellite mapped (SSRs phi025, phi078, phi081; nc012 ); cytosolic or plastidic, dependent on transcript processingmutant seedlings are pale green and lethal once kernel reserves are exhaused, even when plants were grown under 2% CO2
6.05
GRMZM2G306345
Zhang, YL et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12656     Reference: April 18th, 2018
Gene Product: July 28th, 2014
Variation: April 18th, 2018
Gene Model: November 21st, 2012
7 months agoumc1117  : Alba DNA/RNA-binding protein
4.04
GRMZM2G050982
    Variation: September 1st, 2003
Gene Model: April 17th, 2018
7 months agoumc1142  :
4.05
GRMZM2G030125
    Variation: September 1st, 2003
Gene Model: April 17th, 2018
7 months agoumc1964  :
4.05
GRMZM2G075496
    Variation: September 1st, 2003
Gene Model: April 17th, 2018
7 months agocsu221  :
4.00
GRMZM2G131409
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 17th, 2018
7 months agocsu235  : similar to Arabidopsis chaperone DnaJ-domain containing protein
4.03
GRMZM2G124644
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 17th, 2018
7 months agoAY110355  :
4.06
GRMZM2G074436
    Variation: July 29th, 2004
Gene Model: April 17th, 2018
7 months agoAY110631  :
4.08
GRMZM2G439311
    Variation: July 29th, 2004
Gene Model: April 17th, 2018
8 months agosnrkII4 SnRK2 serine threonine protein kinase 4:
3.06
GRMZM2G110922
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
8 months agosnrkII6 SnRK2 serine threonine protein kinase6:
4.05
GRMZM2G130018
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Variation: November 12th, 2014
Gene Model: November 12th, 2014
8 months agosnrkII1 SnRK2 serine threonine protein kinase1:
 
GRMZM2G035809
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
8 months agosnrkII10 SnRK2 serine threonine kinase10:
 
GRMZM2G066867
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
8 months agosnrkII9 SnRK2 serine threonine protein kinase9:
 
GRMZM2G081915
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: April 14th, 2018
8 months agosnrkII11 SnRK2 serine threonine protein kinase 11:
6.05
GRMZM2G063961
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
8 months agosnrkII2 SnRK2 serine threonine protein kinase2: induced by cold, salt and ABA
7.04
GRMZM2G056732
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
8 months agosnrkII5 SnRK2 serine threonine kinase5:
10.07
GRMZM2G110908
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
8 months agosnrkII7 SnRK2 serine threonine protein kinase7:
2.04
GRMZM2G155593
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
8 months agosnrkII3 SnRK2 serine threonine protein kinase3:
1.05
GRMZM2G180916
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
8 months agoAY110170  :
4.09
GRMZM2G155253
    Variation: July 29th, 2004
Gene Model: April 13th, 2018
8 months agoAY110290  : similar to Arabidopsis putative S-acyltransferase
4.05
GRMZM5G821611
    Variation: July 29th, 2004
Gene Model: April 13th, 2018
8 months agoAY110310  : similar to Arabidopsis P-glycoprotein 2
4.06
GRMZM2G004748
    Variation: July 29th, 2004
Gene Model: April 13th, 2018
8 months agoAY109715  :
4.00
GRMZM2G145725
    Variation: July 29th, 2004
Gene Model: April 12th, 2018
8 months agoAY109980  :
4.08
GRMZM2G363038
    Variation: July 29th, 2004
Gene Model: April 12th, 2018
8 months agoAY109933  :
4.09
GRMZM2G078832
    Variation: September 25th, 2007
Gene Model: April 12th, 2018
8 months agoki1 Kindr-RNAi1: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
 
   Dawe, RK et al. 2018. Cell 173:doi: 10.1016/j.cell.2018.03.009     Reference: April 7th, 2018
Variation: April 8th, 2018
8 months agosmd1 suppressor of meiotic drive1: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
10.06
   Dawe, RK et al. 2018. Cell 173:doi: 10.1016/j.cell.2018.03.009     Reference: April 7th, 2018
Variation: April 7th, 2018
8 months agosmd12 suppressor of meiotic drive12: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
 
   Dawe, RK et al. 2018. Cell 173:doi: 10.1016/j.cell.2018.03.009     Reference: April 7th, 2018
Variation: April 7th, 2018
8 months agomet1 DNA methyl transferase1: cDNA clones
7.01
GRMZM2G333916
Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: December 25th, 2014
Gene Model: December 24th, 2014
8 months agome2 NADP-dependent malic enzyme2: cDNA in roots, preprotein contains chloroplast transit peptide sequences and is imported and processed; C3-like enzyme
6.05
GRMZM2G122479
Borba, AR et al. 2018. Mol Biol Evol pp.doi: 10.1093/molbev/msy060/4962173     Reference: April 6th, 2018
Gene Product: August 21st, 2014
Variation: August 24th, 2014
Gene Model: August 21st, 2014
8 months agomet3 DNA methyl transferase3:
9.07
   Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: February 13th, 2016
8 months agomet7 DNA methyl transferase7:
1.01
   Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: December 22nd, 2014
8 months agomet8 DNA methyl transferase8:
 
GRMZM2G334041
Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: December 25th, 2014
Gene Model: December 24th, 2014
8 months agomet4 DNA methyl transferase4:
8.05
GRMZM2G157589
Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: February 10th, 2010
Gene Model: December 22nd, 2014
8 months agomet6 DNA methyl transferase6:
8.05
GRMZM2G065599
Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: November 20th, 2012
Gene Model: December 23rd, 2014
8 months agodmt104 DNA methyl transferase 104:
 
       Gene Product: April 6th, 2018
8 months agobhlh104  : Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G088443
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: April 5th, 2018
Gene Model: March 31st, 2018
8 months agohda108 histone deacetylase: mutant plants exhibit many developmental defects: significant reduction in plant height, alterations of shoot and leaf development, alterations of inflorescence patterning and fertility
4.05
   Forestan, C et al. 2018. Genetics 208:1443-1466     Reference: April 5th, 2018
Gene Product: September 1st, 2003
Variation: February 1st, 2018
8 months agodmc1 disrupted meiotic cDNA homolog1:
 
GRMZM2G109618
Feng, C et al. 2018. Plant Biotechnol J pp.doi: 10.1111/pbi.12920     Reference: April 5th, 2018
Variation: May 12th, 2017
Gene Model: January 27th, 2017
8 months agoafd1 absence of first division1: male and female sterility; early meiosis
6.07
GRMZM2G059037
Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341   AT5G05490 (TAIR)
LOC_Os05g50410 (MSU/TIGR)
Os05g0580500 (Gramene)
Reference: April 4th, 2018
Gene Product: July 30th, 2009
Variation: August 11th, 2011
Gene Model: July 14th, 2011
8 months agoam1 ameiotic1: male and female sterility - anaphase I equatorial; alleles am1-pra1(was pra1), am1-2 (was am2)affects switch to meiotic cell cycle
5.02
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: August 11th, 2011
8 months agody1 desynaptic1: partial to complete male and female sterility; chromosomes separate after synapsis
 
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: June 21st, 2012
8 months agopam1 plural abnormalities of meiosis1: desynchronized meiotic divisions and premeiotic mitosis; male sterile, incompletely female sterile
1.05
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: September 1st, 2003
8 months agopam2 plural abnormalities of meiosis2: like pam1
 
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: September 1st, 2003
8 months agopo1 polymitotic1: (aka ms4, ms6) repeats 2nd meiotic division in male and female
6.01 - 6.01
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: May 20th, 2006
8 months agova1 variable sterile1: variable male and female fertility; cytokinesis fails in anaphase I
7.03
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: September 1st, 2003
8 months agoumc60  :
3.06
GRMZM2G094771
Ragot, M; Sisco, PH; Hoisington, DA; Stuber, CW. 1995. Crop Sci 35:1306-1315     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 4th, 2018
8 months agoumc3b  : NPI linkage catalog of 1/25/91 calls this locus umc3 in one place and umc3b in another.
3.07
GRMZM2G454081
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 3rd, 2018
8 months agoumc2118  :
3.00 - 3.01
GRMZM5G884242
    Variation: April 3rd, 2018
Gene Model: April 3rd, 2018
8 months agoumc2270  :
3.06
GRMZM2G047384
    Variation: February 24th, 2007
Gene Model: April 3rd, 2018
8 months agocbl10 calcineurin B-like10:
3.09
GRMZM2G116584
Zhang, F et al. 2016. Plant Sci 253:118-129     Reference: December 27th, 2016
Gene Product: October 19th, 2016
Gene Model: April 3rd, 2018
8 months agoumc1273  :
3.08
GRMZM2G047298
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1311  :
3.06
GRMZM2G105184
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1320  :
3.08
GRMZM5G824843
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1392  :
3.04
GRMZM2G395983
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1394  :
3.01
GRMZM5G848602
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1399  :
3.07
GRMZM2G055898
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1404  :
3.07
GRMZM2G069061
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1449  :
3.04
GRMZM2G061655
    Variation: February 24th, 2007
Gene Model: April 2nd, 2018
8 months agoumc1458  : similar to Arabidopsis kinase-like protein
3.02
GRMZM2G055089
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1489  :
3.07
GRMZM2G077307
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1495  :
3.04
GRMZM2G161154
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1504  :
3.04
GRMZM2G034855
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoiaa11 Aux/IAA-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G167794
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1608  :
3.04
GRMZM5G871336
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1717a  :
3.04
GRMZM2G076029
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1742  :
3.04
GRMZM2G114552
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1767  :
3.07
AC210193.4_FG002
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1773  :
3.04
GRMZM2G390374
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1780  : similar to Arabidopsis ENTH/VHS/GAT family protein
3.00
GRMZM2G153138
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agoumc1813  :
3.09
GRMZM2G117685
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
8 months agolac3 laccase3:
 
GRMZM2G169033
Sun, Q et al. 2018. Molecular Plant pp.doi: 10.1016/j.molp.2018.03.013     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
8 months agolac5 laccase5:
 
GRMZM2G367668
Sun, Q et al. 2018. Molecular Plant pp.doi: 10.1016/j.molp.2018.03.013     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
8 months agolac4 laccase4:
 
GRMZM2G072780
Caparros-Ruiz, D et al. 2006. Plant Sci 171:217-225     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
8 months agolac6 laccase6:
 
GRMZM2G164467
    Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
8 months agolac1 laccase1:
 
GRMZM5G842071
Caparros-Ruiz, D et al. 2006. Plant Sci 171:217-225     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
8 months agouaz288a(ppi)  :
3.05
GRMZM2G063949
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: March 30th, 2018
8 months agoumc1135  :
3.07
GRMZM2G105863
    Variation: September 1st, 2003
Gene Model: March 30th, 2018
8 months agoumc1174  :
3.05
AC210168.4_FG003
    Variation: September 1st, 2003
Gene Model: March 30th, 2018
8 months agobx1 benzoxazinless1: plastid localized, committed step in cyclic hydroxamates/DIMBOA synthesis; insect resistance in young seedlings; SSR umc1022
4.00
GRMZM2G085381
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 14th, 2011
Variation: October 24th, 2011
Gene Model: October 14th, 2011
8 months agoorp1 orange pericarp1: duplicate factor with orp2; pericarp orange over orp1 orp2 kernels, manifesting metaxenia; lethal, tryptophan auxotroph
4.05
   Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: September 1st, 2003
Variation: May 19th, 2006
8 months agoorp2 orange pericarp2: duplicate factor with orp2; pericarp orange over orp1 orp2 kernels, manifesting metaxenia; lethal, tryptophan auxotroph
10.03
   Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
8 months agobx7 benzoxazinone synthesis7: cytosolic O-methyl transferase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc2039, INDEL IDP478.
4.03
GRMZM2G441753
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 31st, 2011
Variation: October 26th, 2011
Gene Model: October 19th, 2011
8 months agobx3 benzoxazinone synthesis3: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1017
4.01
GRMZM2G167549
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 19th, 2011
Variation: November 12th, 2013
Gene Model: October 24th, 2011
8 months agobx8 benzoxazinone synthesis8: cytosolic glucosyltransferase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
4.01
GRMZM2G085054
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 20th, 2011
Variation: October 31st, 2011
Gene Model: October 20th, 2011
8 months agobx9 benzoxazinone synthesis9: cytosolic glucosyl transferase; redundant with bx8; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
1.06
GRMZM2G161335
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 20th, 2011
Variation: October 27th, 2011
Gene Model: October 20th, 2011
8 months agotsa1 tryptophan synthase alpha subunit1: With products of orp1 and orp2 genes, forms tryptophan synthase. Plastidic.
 
GRMZM5G841619
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 21st, 2011
Gene Model: October 14th, 2011
8 months agobx12 benzoxazinone synthesis12:
 
GRMZM2G023325
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: July 8th, 2013
Variation: July 8th, 2013
Gene Model: July 8th, 2013
8 months agoigps1 indole-3-glycerolphosphate synthase1:
 
GRMZM2G106950
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: March 29th, 2018
Gene Model: March 29th, 2018
8 months agoigps2 indole-3-glycerolphosphate synthase2:
 
   Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: March 29th, 2018
8 months agoigps3 indole-3-glycerolphosphate synthase3:
 
GRMZM2G145870
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: March 29th, 2018
Gene Model: March 29th, 2018
8 months agoigl1 indole-3-glycerol phosphate lyase1: mRNA production induced by volicitin, forms free indole
1.11
GRMZM2G046191
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 14th, 2011
Variation: July 18th, 2014
Gene Model: July 11th, 2014
8 months agobx6 benzoxazinone synthesis6: cytosolic 2-oxoglutarate-dependent dioxygenase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1232
4.01
   Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: June 20th, 2016
Variation: November 18th, 2011
8 months agorcc1 regulator of chromosome condensation1: similar to Arabidopsis Regulator of chromosome condensation (RCC1) family protein
3.06
GRMZM2G302245
Zheng, HY et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw195     Reference: November 18th, 2016
Variation: March 28th, 2018
Gene Model: March 28th, 2018
8 months agophi453121a  : similar to Arabidopsis E3 ubiquitin-protein ligase SINAT3
3.00
       Variation: March 28th, 2018
8 months agotls1 tasselless1: encodes an aquaporin; plants generally lack tassels, have ear shoots but ear development is variable ranging from no seed set to a few kernels on a small ball-shaped cob; in some backgrounds, pubescent, leathery at 4-8 leaf stage; similar to bs1 of Woodworth and Micu. Phenotypes corrected by boron spraying (Leonard et al 2014).
1.11 - 1.12
GRMZM2G176209
Matthes, MS et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12717     Reference: March 27th, 2018
Gene Product: April 3rd, 2014
Variation: July 29th, 2014
Gene Model: April 2nd, 2014
8 months agodzs10 delta zein structural10: [was Zps10/(22)]; high (22.5%) methionine 10kDa delta zein; RFLP (probe 10kZ-1)
9.03 - 9.03
   Li, XX et al. 2018. Plant J pp.doi: 10.1111/tpj.13907     Reference: March 25th, 2018
Gene Product: September 1st, 2003
Variation: November 21st, 2012
8 months agozp15 zein protein, 15kDa15: high methionine; genomic blot indicates one or two copies
6.01 - 6.02
GRMZM2G086294
Li, XX et al. 2018. Plant J pp.doi: 10.1111/tpj.13907     Reference: March 25th, 2018
Gene Product: July 8th, 2013
Variation: August 27th, 2013
Gene Model: July 8th, 2013
8 months agodzs18 delta zein structural18: high (26%) methionine 18 kDa delta zein, similar to dzs10
6.04
   Li, XX et al. 2018. Plant J pp.doi: 10.1111/tpj.13907     Reference: March 25th, 2018
Gene Product: September 1st, 2003
Variation: February 16th, 2014
8 months agogz50 50kD gamma zein: endosperm-specific protein cDNA
7.02
GRMZM2G138689
Li, XX et al. 2018. Plant J pp.doi: 10.1111/tpj.13907     Reference: March 25th, 2018
Gene Product: September 22nd, 2010
Variation: September 16th, 2010
Gene Model: November 21st, 2014
8 months agocsu845  :
3.09
GRMZM2G364528
    Variation: September 1st, 2003
Gene Model: March 23rd, 2018
8 months agocsu636  :
3.05
GRMZM2G359505
    Variation: September 1st, 2003
Gene Model: March 23rd, 2018
8 months agommc0022  :
3.05
GRMZM5G832175
    Variation: September 1st, 2003
Gene Model: March 23rd, 2018
8 months agommc0132  :
3.04
GRMZM2G134178
    Variation: September 1st, 2003
Gene Model: March 23rd, 2018
8 months agommc0312a  : similar to Arabidopsis P-loop containing nucleoside triphosphate hydrolase-like protein
3.04
GRMZM2G018951
    Variation: September 1st, 2003
Gene Model: March 23rd, 2018
8 months agotcb1 teosinte crossing barrier1: Barrier to crossing of maize onto Central Plateau teosinte - transferred to maize with linked positive modifiers, fails to accept any pollen, including Ga1-s
4.04
   Jones, ZG; Goodman, MM. 2018. Crop Sci 58:doi: 10.2135/cropsci2017.09.0560     Reference: March 23rd, 2018
Variation: May 19th, 2006
8 months agohac101a  :
3.04
GRMZM2G069886
    Gene Product: November 6th, 2003
Variation: September 1st, 2003
Gene Model: March 23rd, 2018
8 months agoatx4 arabidopsis trithorax homolog4:
3.01
GRMZM2G085176
Chen, LQ et al. 2017. Plant Physiol 174:1795-1806   AT4G27910 (TAIR)
LOC_Os01g11952 (MSU/TIGR)
Reference: June 29th, 2017
Gene Product: June 30th, 2017
Gene Model: March 23rd, 2018
8 months agorafs1 raffinose synthase1: mutants have significantly reduced seed vigor
3.03
GRMZM2G150906
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Variation: March 23rd, 2018
Gene Model: March 23rd, 2018
8 months agobnlg197  :
3.06
GRMZM5G851026
    Variation: September 1st, 2003
Gene Model: March 22nd, 2018
8 months agobnlg1601  : similar to Arabidopsis Sterile alpha motif (SAM) domain-containing protein
3.05
GRMZM2G081935
    Variation: September 1st, 2003
Gene Model: March 22nd, 2018
8 months agobnlg1638  :
3.04
GRMZM2G104829
    Variation: September 1st, 2003
Gene Model: March 22nd, 2018
8 months agowrky27 WRKY-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.02
GRMZM2G475984
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: March 22nd, 2018
8 months agobnlg1754  :
3.09
GRMZM2G087769
    Variation: September 1st, 2003
Gene Model: March 22nd, 2018
8 months agozhd21 ZF-HD-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.05
GRMZM5G821755
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 21st, 2018
Gene Model: March 21st, 2018
8 months agobnlg1160  :
3.06
GRMZM2G071705
    Variation: September 1st, 2003
Gene Model: March 21st, 2018
8 months agobnlg1452  :
3.04
GRMZM2G410916
    Variation: September 1st, 2003
Gene Model: March 21st, 2018
8 months agoAY109870  :
3.04
GRMZM2G111014
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
8 months agoAY109934  : similar to Arabidopsis and Sorghum protein trichome birefringence-like 19
3.08
GRMZM2G004183
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
8 months agoAY110055  :
3.06
GRMZM2G014452
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
8 months agoAY110151  :
3.04
GRMZM2G017835
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
8 months agoAY110352  :
3.05
GRMZM2G163514
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
8 months agoAY110540  :
3.08
GRMZM2G130358
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
8 months agoAY112215  :
3.05
GRMZM2G138258
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
8 months agoBE639846  :
3.06
GRMZM2G127180
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
8 months agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: February 24th, 2015
Variation: March 16th, 2018
8 months agoAI770795  :
3.06
GRMZM2G052365
    Variation: July 29th, 2004
Gene Model: March 16th, 2018
9 months agosmr4 siamese-related4:
 
GRMZM2G019353
Li, FF et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.03.007     Reference: March 14th, 2018
Gene Product: March 8th, 2017
Gene Model: March 14th, 2018
9 months agoo*-N1244A opaqueN1244A: etched; striate, white stripe mutable seedling?
4.00 - 4.05
   Neuffer, MG. 1994. Personal communication     Reference: September 1st, 2003
Variation: March 13th, 2018
9 months agopsk2 phytosulfokine2:
3.05
GRMZM2G079290
Lorbiecke, R et al. 2005. J Exp Bot 56: 1805-1819     Reference: January 17th, 2007
Variation: December 30th, 2015
Gene Model: March 13th, 2018
9 months agoms23 male sterile23: pollen mother cells degenerate
8.01 - 8.02
GRMZM2G021276
Liu, YM et al. 2018. Plant Growth Regulation pp.doi: 10.1007/s10725-018-0377-5     Reference: March 9th, 2018
Gene Product: September 14th, 2016
Variation: December 4th, 2016
Gene Model: December 4th, 2016
9 months agoys1 yellow stripe1: yellow tissue between leaf veins, reflects iron deficiency symptoms; defect in Fe-phytosiderophore uptake
5.05 - 5.06
   Chan-Rodriguez, D; Walker, EL. 2018. Frontiers Plant Sci 9:157     Reference: March 9th, 2018
Gene Product: September 1st, 2003
Variation: March 9th, 2018
9 months agoys3 yellow stripe3: yellow tissue between leaf veins, corrected by ferrous iron supplementation
3.04
GRMZM2G063306
Chan-Rodriguez, D; Walker, EL. 2018. Frontiers Plant Sci 9:157   LOC_Os11g04020 (MSU/TIGR)
Os11g0134900 (Gramene)
Reference: March 9th, 2018
Gene Product: September 23rd, 2016
Variation: March 9th, 2018
Gene Model: March 9th, 2018
9 months agoumc1675  : similar to Arabidopsis putative protein phosphatase 2C 62
9.07
GRMZM2G004377
    Variation: September 1st, 2003
Gene Model: March 8th, 2018
9 months agobhlh97 bHLH-transcription factor 97: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.07
AC149829.2_FG004
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: March 8th, 2018
9 months agoumc1743  :
9.03
GRMZM2G108570
    Variation: September 1st, 2003
Gene Model: March 8th, 2018
9 months agoumc1789  :
9.06
GRMZM2G008638
    Variation: September 1st, 2003
Gene Model: March 8th, 2018
9 months agoumc109  : NCBI: Serine/threonine-protein kinase WNK (With No Lysine)-related
9.01
GRMZM2G136831
Anderson, L, et al. 2004. Genetics. 166:1923-1933     Reference: February 12th, 2011
Variation: March 8th, 2018
Gene Model: April 20th, 2017
9 months agoumc1137  :
9.07
GRMZM2G178106
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
9 months agoumc1170  :
9.02
GRMZM2G016323
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
9 months agoumc1258  :
9.03
GRMZM2G396553
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
9 months agoumc1267  :
9.03 - 9.04
GRMZM2G010884
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
9 months agoumc1271  :
9.03
GRMZM2G342738
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
9 months agoumc1366  :
9.06
GRMZM5G824920
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
9 months agoumc1492  :
9.04
GRMZM2G151387
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
9 months agoumc1586  :
9.03
GRMZM2G071602
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
9 months agoumc1078  :
9.04
GRMZM2G323479
    Variation: September 1st, 2003
Gene Model: March 6th, 2018
9 months agoumc1120  : similar to Arabidopsis nodulation protein-like proteinNCBI, "not annotated on reference assembly": P-loop containing nucleoside triphosphate hydrolase superfamily protein P-loop containing nucleoside triphosphate