With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.
Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.
This page is based on our monthly release. The most recent updates can be found on our curation site or by clicking the Most Recent Data option in the menu below.
| Last Update | Gene | Full Name : Description | Chromosome
or Bin | Gene
Model | Recent Reference | Orthologs | Update information |
| yesterday | AY110452 | : | 1.09 | GRMZM2G068259
| | | Variation: July 29th, 2004
Gene Model: September 19th, 2017
|
| 2 days ago | cct1 | CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012) | | GRMZM2G381691
| Li, YP et al. 2017. Theor Appl Genet pp.doi: 10.1007/s00122-017-2978-1 | AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene) | Reference: September 18th, 2017
Gene Product: July 17th, 2012
Variation: July 19th, 2017
Gene Model: July 17th, 2012
|
| 2 days ago | dgk1 | diacylglycerol kinase1: | 1.05 | GRMZM2G076911
| Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8 | | Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
|
| 2 days ago | dgk2 | diacylglycerol kinase2: | | GRMZM2G094452
| Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8 | | Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
|
| 2 days ago | dgk3 | diacylglycerol kinase3: | | GRMZM2G106578
| Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8 | | Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
|
| 2 days ago | dgk4 | diacylglycerol kinase4: | | GRMZM2G019562
| Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8 | | Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
|
| 2 days ago | dgk5 | diacylglycerol kinase5: | | GRMZM5G827286
| Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8 | | Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
|
| 2 days ago | dgk6 | diacylglycerol kinase6: | | GRMZM2G128214
| Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8 | | Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
|
| 2 days ago | dgk7 | diacylglycerol kinase7: | | GRMZM2G062429
| Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8 | | Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
|
| 2 days ago | ics1 | isochorismate synthase like1: | 7.02 | GRMZM2G022837
| | AT1G18870 (TAIR)
LOC_Os09g19734 (MSU/TIGR) | Gene Product: January 24th, 2014
Gene Model: September 18th, 2017
|
| 4 days ago | plt2 | phospholipid transfer protein homolog2: amino acid sequence, deduced from coleoptile cDNA; SSR locus umc1010 | 3.09 | | Noonan, J et al. 2017. Int J Mol Sci 8:E1938 | | Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
|
| 4 days ago | umc1318 | : | 10.01 | GRMZM5G898755
| Noonan, J et al. 2017. Int J Mol Sci 8:E1938 | | Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: September 16th, 2017
|
| 4 days ago | cta1 | chitinase A1: cDNA sequence corresponds to peptide sequence of maize 28kDa chitinase A | 2.04 | | Noonan, J et al. 2017. Int J Mol Sci 8:E1938 | | Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
|
| 4 days ago | ctb1 | chitinase B1: cDNA sequence corresponds to protein sequence of maize chitinase B | 10.04 | GRMZM2G005633
| Noonan, J et al. 2017. Int J Mol Sci 8:E1938 | | Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 21st, 2015
|
| 4 days ago | umc1594 | : | 3.09 | GRMZM2G107839
| Noonan, J et al. 2017. Int J Mol Sci 8:E1938 | | Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: September 16th, 2017
|
| 4 days ago | php20075a(gast) | : NCBI: GAST1 protein | 10.01 | GRMZM2G172596
| Noonan, J et al. 2017. Int J Mol Sci 8:E1938 | | Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 25th, 2017
|
| 4 days ago | plt1 | phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins | 3.06 | GRMZM2G127949
| Noonan, J et al. 2017. Int J Mol Sci 8:E1938 | | Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 6th, 2015
|
| 4 days ago | ctn4 | chitinase4: | | GRMZM2G373106
| Noonan, J et al. 2017. Int J Mol Sci 8:E1938 | | Reference: September 16th, 2017
Gene Product: September 1st, 2003
Gene Model: September 16th, 2017
|
| 4 days ago | umi11 | Ustilago maydis induced11: | 7.00 | GRMZM2G450866
| Noonan, J et al. 2017. Int J Mol Sci 8:E1938 | | Reference: September 16th, 2017
Gene Product: January 12th, 2015
Variation: January 11th, 2015
Gene Model: January 11th, 2015
|
| 6 days ago | xer1 | xerico1: Over-expression improves water use efficiency and drought tolerance in transgenic maize plants through reduction in ABA8OX proteins stability and ABA degradation. | 2.07 | GRMZM2G018070
| Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072 | | Reference: September 14th, 2017
Gene Product: September 14th, 2017
Gene Model: September 14th, 2017
|
| 6 days ago | xer3 | xerico3: | | GRMZM2G005840
| Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072 | | Reference: September 14th, 2017
Gene Product: September 14th, 2017
Variation: September 14th, 2017
Gene Model: September 14th, 2017
|
| 6 days ago | xer2 | xerico2: | | GRMZM2G393349
| Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072 | | Reference: September 14th, 2017
Gene Product: September 14th, 2017
Gene Model: September 14th, 2017
|
| 6 days ago | xer4 | xerico4: | | GRMZM2G029623
| Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072 | | Reference: September 14th, 2017
Gene Product: September 14th, 2017
Gene Model: September 14th, 2017
|
| 7 days ago | phos3 | phosphate transporter3: | | GRMZM5G872499
| Salazar, MN. 2017. Zm00001d018445 structure | LOC_Os02g56510 (MSU/TIGR) | Reference: September 13th, 2017
Gene Product: February 27th, 2016
Variation: September 13th, 2017
Gene Model: September 13th, 2017
|
| 8 days ago | kch7 | potassium channel7: | | GRMZM2G178356
| Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712 | | Reference: September 12th, 2017
Gene Product: February 20th, 2008
Variation: September 12th, 2017
Gene Model: September 12th, 2017
|
| 8 days ago | kch8 | potassium channel8: | | GRMZM5G838773
| Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712 | | Reference: September 12th, 2017
Gene Product: February 20th, 2008
Gene Model: September 12th, 2017
|
| 8 days ago | kch4 | potassium channel4: | 3.02 | GRMZM2G093313
| Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712 | | Reference: September 12th, 2017
Gene Product: February 20th, 2008
Variation: February 20th, 2008
Gene Model: April 22nd, 2011
|
| 8 days ago | kch3 | potassium channel3: single copy (Southern blot), function confirmed by expression in Xenopus oocytes (Philippar 2003; Su 2005) | 2.06 | GRMZM2G081666
| Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712 | | Reference: September 12th, 2017
Gene Product: February 20th, 2008
Variation: April 22nd, 2011
Gene Model: April 22nd, 2011
|
| 9 days ago | npf2 | nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein | | GRMZM2G161459
| Wen, ZY et al. 2017. Plant Cell pp.doi: 10.1105/tpc.16.00724 | AT1G12110 (TAIR) | Reference: September 11th, 2017
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
|
| 9 days ago | npf1 | nitrate transporter/peptide transporter family1: encodes a low-affinity nitrate transporter with efflux activity; switches to a high-affinity chloride selective transporter, when supplied chloride. | 10.03 | GRMZM2G086496
| Wen, ZY et al. 2017. Plant Cell pp.doi: 10.1105/tpc.16.00724 | AT1G12110 (TAIR) | Reference: September 11th, 2017
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
|
| 12 days ago | uce3 | ubiquitin conjugating enzyme3: | 1.01 | GRMZM2G070047
| Wills, DM et al. 2017. J Hered pp.doi: 10.1093/jhered/esx073 | | Reference: September 8th, 2017
Gene Product: September 1st, 2003
Variation: February 15th, 2015
Gene Model: February 16th, 2015
|
| 12 days ago | scmv1 | resistance to sugarcane mosaic virus1: resistance requires dominant factors Scm1 and Scm2; resistance in various inbreds is concordant for SCMV and MDMV, yet recombinants of Scm1 occur with the NOR, whereas none were found for Mdm1 by Simcox et al. (1995) | 6.00 - 6.01 | GRMZM2G014055
| Liu, Q et al. 2017. Molecular Plant 10:483-497 | | Reference: September 8th, 2017
Gene Product: September 1st, 2003
Variation: June 29th, 2005
Gene Model: September 7th, 2017
|
| 12 days ago | zag6 | agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis. | | GRMZM2G026223
| Wills, DM et al. 2017. J Hered pp.doi: 10.1093/jhered/esx073 | | Reference: September 8th, 2017
Variation: June 9th, 2014
Gene Model: June 9th, 2014
|
| 12 days ago | bx12 | benzoxazinone synthesis12: | | GRMZM2G023325
| Gaillard, MDP et al. 2017. New Phytol pp.doi: 10.1111/nph.14757 | | Reference: September 8th, 2017
Gene Product: July 8th, 2013
Variation: July 8th, 2013
Gene Model: July 8th, 2013
|
| 12 days ago | fnsi2 | flavone synthase typeI2: Encodes a flavone synthase that is of the soluble Fe2+/2- oxoglutarate-dependent dioxygenase class | | GRMZM2G475380
| Wills, DM et al. 2017. J Hered pp.doi: 10.1093/jhered/esx073 | AT5G24530 (TAIR) | Reference: September 8th, 2017
Gene Product: August 15th, 2015
Gene Model: August 14th, 2015
|
| 13 days ago | abp1 | auxin binding protein1: putative auxin receptor, single band in Southerns, endoplasmic reticulum and plasma membrane locales (aka axr1, aux311) | 3.05 - 3.05 | | Leng, PF, et al. 2017. Molecular Plant. 0:doi: 10.1016/j.molp.2017.07.013 | | Reference: September 7th, 2017
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
|
| 13 days ago | fl3 | floury3: endosperm opaque, soft; dosage effect | 8.03 | GRMZM2G006585
| Li, Q et al. 2017. Plant Cell pp.doi: 10.1105/tpc.17.00576 | | Reference: September 7th, 2017
Gene Product: September 7th, 2017
Variation: September 7th, 2017
Gene Model: September 7th, 2017
|
| 13 days ago | y1 | yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb) | 6.01 | GRMZM2G300348
| Swarts, KL, et al. 2017. Science. 357:512-515 | | Reference: September 7th, 2017
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
|
| 13 days ago | scmv2 | resistance to sugarcane mosaic virus2: dominant Scmv1 and Scmv2 confer resistance | 3.04 | GRMZM2G116204
| Leng, PF, et al. 2017. Molecular Plant. 0:doi: 10.1016/j.molp.2017.07.013 | | Reference: September 7th, 2017
Variation: June 29th, 2005
Gene Model: September 7th, 2017
|
| 13 days ago | omt2 | Caffeoyl CoA O-methyltransferase2: | 9.02 | GRMZM2G099363
| Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919 | | Reference: September 7th, 2017
Gene Product: January 5th, 2014
Variation: May 13th, 2016
Gene Model: September 17th, 2014
|
| 13 days ago | ago18b | argonaute18b: mutant affects length of central tassel branch | 1.08 | GRMZM2G457370
| Sun, W et al. 2017. J Integr Plant Biol pp.doi: 10.1111/jipb.12596 | | Reference: September 7th, 2017
Gene Product: August 12th, 2016
Variation: September 7th, 2017
Gene Model: August 12th, 2016
|
| 13 days ago | fbxl1 | F-box domain and LRR containing protein1: encodes an F-box domain and a leucine-rich-repeat domain protein | | GRMZM2G481291
| Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919 | | Reference: September 7th, 2017
Gene Product: July 25th, 2017
Variation: July 25th, 2017
Gene Model: July 25th, 2017
|
| 13 days ago | rlk1 | receptor-like protein kinase1: encodes an S-locus receptor-like protein kinase; | | GRMZM2G099324
| Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919 | | Reference: September 7th, 2017
Gene Product: July 1st, 2015
Variation: July 25th, 2017
Gene Model: July 25th, 2017
|
| 13 days ago | pipf1 | Ping-Pong family plant transposase1: encodes a PIF/Ping-Pong family plant transposase | | GRMZM2G440198
| Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919 | | Reference: September 7th, 2017
Gene Product: July 25th, 2017
Variation: July 25th, 2017
Gene Model: July 25th, 2017
|
| 14 days ago | mgt10 | magnesium transporter10: encodes CorA/MRS2/MGT-type magnesium transporter | | GRMZM2G018706
| Li, HY et al. 2017. Plant Mol Biol pp.doi: 10.1007/s11103-017-0645-1 | | Reference: September 6th, 2017
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
|
| 14 days ago | bzip127 | bZIP-transcription factor 127: similar to Arabidopsis basic leucine zipper transcription factor-like protein (NCBI)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.06 | GRMZM2G175280
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: September 6th, 2017
Gene Model: September 6th, 2017
|
| 15 days ago | lfy1 | leafy1: dominant Lfy1 plants have increased number of leaves above ear | | | Cui, M et al. 2017. Frontiers Plant Sci 8:1437 | | Reference: September 5th, 2017
Variation: September 24th, 2015
|
| 15 days ago | wox11 | WUSCHEL-related homeobox transcription factor 11: | | | Zhao Y et al. 2009. Plant Cell. 21:736-48 | | Reference: September 5th, 2017
Gene Product: August 25th, 2017
|
| 18 days ago | wrky105 | WRKY-transcription factor 105: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Cai, RH et al. 2017. Planta pp.doi: 10.1007/s00425-017-2766-9 | | Reference: September 2nd, 2017
Variation: September 2nd, 2017
|
| 19 days ago | ras11G1 | ras-related protein11G1: | | AC197246.3_FG001
| Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141 | | Reference: January 12th, 2011
Variation: January 24th, 2011
Gene Model: September 1st, 2017
|
| 23 days ago | hxa102 | histone acetyltransferase complex component102: | | GRMZM5G815323
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: August 28th, 2017
Variation: August 28th, 2017
Gene Model: August 28th, 2017
|
| 26 days ago | ns2 | narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named) | 4.08 | | Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: June 29th, 2005
|
| 26 days ago | wox9c | WUSCHEL related homeobox 9c: late embryo in outer layer of suspensor through leaf 4 stage | | GRMZM2G409881
| Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: September 6th, 2007
Gene Model: December 21st, 2015
|
| 26 days ago | wox9b | WUSCHEL related homeobox 9b: expressed in late embryo stages;in suspensor and also, unlike wox9c, in the shoot apical meristem (SAM) | | GRMZM2G031882
| Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: September 6th, 2007
Gene Model: December 21st, 2015
|
| 26 days ago | bnlg2057 | : | 1.06 | GRMZM2G017629
| | | Variation: September 1st, 2003
Gene Model: August 25th, 2017
|
| 26 days ago | bnl5.59a | : Tests with B-A translocation stocks indicated that the probe does not map to 1L, 1S, 4L, 7L, or 9L and 6L gave false positives. | 1.06 | GRMZM2G113840
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2017
|
| 26 days ago | arr6 | ARR-B-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Pan, QC et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00709 | | Reference: August 25th, 2017
Gene Product: June 30th, 2017
|
| 26 days ago | wox13b | WUSCHEL-related homeobox transcription factor 13b: | | | Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
|
| 26 days ago | wox13a | WUSCHEL-related homeobox-transcription factor 13a: | | | Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
|
| 26 days ago | hb122 | Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Lowe, KS et al. 2016. Plant Cell pp.10.1105/tpc.16.00124 | | Reference: October 1st, 2016
Gene Product: August 25th, 2017
|
| 26 days ago | wox3b | WUSCHEL-related homeobox 3b: embryonic transcription factor of wox3 gene family, which also includes ns1, ns2, and wox3a. Expression of of all is similar, except wox3a, wox3b are expressed in the shoot apical meristem, unlike ns1 or ns2 (Nardmann et al 2007). | | | Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
|
| 26 days ago | wox5a | WUSCHEL-homeobox-transcription factor 5A: embryonic WUSCHEL homeobox transcription factor (Nardmann et al 2007) | | | Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
|
| 26 days ago | wox5b | WUSCHEL-homeobox-transcription factor 5b: embryonic transcription factor (Nardmann et al 2007) | | | Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
|
| 26 days ago | hb67 | Homeobox-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Somssich, M et al. 2016. Development pp.doi: 10.1242/dev.133645 | | Reference: September 15th, 2016
Gene Product: August 25th, 2017
|
| 26 days ago | wox3a | WUSCHEL homeobox 3A: embryonic transcription factor; expression in embryonic leaf similar to wox3b, but distinct from ns1/ns2 also in the wox3 gene family (Nardmann et al 2007) | | | Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: August 24th, 2017
|
| 26 days ago | wox2b | WUSCHEL-related homeobox 2b: | | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: August 25th, 2017
|
| 26 days ago | wox2a | WUSCHEL-related homeobox 2a`: embryonic transcription factor (Nardmann et al 2007) | | | Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
|
| 26 days ago | ns1 | narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed | 2.05 | | Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: February 20th, 2015
|
| 26 days ago | wox9a | WUSCHEL related homeobox 9a: embryonic transcription factor (Nardmann et al 2007) | | GRMZM2G133972
| Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: January 31st, 2011
Gene Model: December 21st, 2015
|
| 26 days ago | wox4 | wuschel-related homeobox4: embryonic WUSCHEL homeobox transcription factor specific to hypocotyl vascular system Nardmann et al 207 | | | Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484 | | Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: May 1st, 2016
|
| 26 days ago | wox12a | wuschel-related homeobox12A: cDNA ortholog of Arabidopsis wuschel-related homeobox gene | | | Nardmann, J; Werr, W. 2006. Molecular biology and evolution. 23:2492-2504 | | Reference: November 6th, 2006
Gene Product: August 25th, 2017
|
| 26 days ago | IDP1951 | : | 1.06 | GRMZM2G113726
| | | Variation: March 31st, 2005
Gene Model: August 25th, 2017
|
| 27 days ago | myb63 | MYB-transcription factor 63: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 4.08 | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: July 25th, 2017
Variation: August 24th, 2017
|
| 27 days ago | myb164 | MYB-transcription factor 164: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: July 25th, 2017
Variation: August 24th, 2017
|
| 27 days ago | cenH3 | centromeric histone H3: | 6.06 | GRMZM2G158526
| Zhao, H et al. 2017. Chromosome Res pp.doi: 10.1007/s10577-017-9564-x | | Reference: August 24th, 2017
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
|
| 28 days ago | uce8 | ubiquitin conjugating enzyme8: | 5.03 | GRMZM2G146374
| | | Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
|
| 28 days ago | uce1 | ubiquitin conjugating enzyme1: endosperm cDNA 2C06C11 (uaz102), similar to plant ubiquitin conjugating enzymes | 1.08 | GRMZM2G053764
| Helentjaris, T et al. 1994. MNL 68:101-104 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: July 7th, 2017
|
| 28 days ago | uce6 | ubiquitin conjugating enzyme6: | | GRMZM2G018447
| | | Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: July 7th, 2017
|
| 28 days ago | uce7 | ubiquitin conjugating enzyme7: | | GRMZM2G053764
| | | Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
|
| 29 days ago | arftf25 | ARF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 8.06 | GRMZM2G116557
| Chen, Q et al. 2017. Frontiers Plant Sci 8:1355 | | Reference: August 22nd, 2017
Variation: August 22nd, 2017
Gene Model: August 22nd, 2017
|
| 29 days ago | gun1 | genomes uncoupled1: ortholog of Arabidopsis GUN1 (At2g31400) pentatricopeptide repeat-containing protein, chloroplastic-like | 1.05 | GRMZM2G432850
| | AT2G31400 (TAIR) | Gene Product: December 27th, 2016
Gene Model: August 22nd, 2017
|
| 32 days ago | wrky111 | WRKY-transcription factor 111: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Hu, SL et al. 2017. Plant Sci 263:132-141 | | Reference: August 19th, 2017
Gene Product: July 24th, 2017
Variation: July 24th, 2017
|
| 32 days ago | tar1 | tryptophan aminotransferase related1: | 6.05 | GRMZM2G127160
| Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791 | | Reference: August 19th, 2017
Gene Product: April 30th, 2011
Gene Model: June 4th, 2012
|
| 32 days ago | vt2 | vanishing tassel2: inflorescence development; TRP-depenedent auxin synthesis | | GRMZM2G127308
| Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791 | AT1G70560 (TAIR) | Reference: August 19th, 2017
Gene Product: April 30th, 2011
Variation: June 24th, 2011
Gene Model: May 2nd, 2012
|
| 32 days ago | yuc2 | Yucca2: | | GRMZM2G159393
| Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791 | | Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: September 12th, 2012
|
| 32 days ago | yuc4 | Yucca4: up-regulated by light irradiation in the 0-1mm tip region | | GRMZM2G141383
| Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791 | | Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: June 17th, 2016
|
| 32 days ago | yuc7 | yucca7: | | GRMZM2G480386
| Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791 | | Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: August 19th, 2017
|
| 32 days ago | yuc8 | yucca8: | | GRMZM2G017193
| Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791 | | Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: August 19th, 2017
|
| 32 days ago | yuc9 | yucca9: | | GRMZM2G333478
| Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791 | | Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: August 19th, 2017
|
| 32 days ago | tar2 | tryptophan aminotransferase related2: | | GRMZM2G066345
| Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791 | | Reference: August 19th, 2017
Gene Product: April 30th, 2011
Gene Model: August 19th, 2017
|
| 32 days ago | tar3 | tryptophan aminotransferase related3: | 6.05 | GRMZM2G141810
| Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791 | | Reference: August 19th, 2017
Gene Product: April 30th, 2011
Gene Model: August 22nd, 2013
|
| 32 days ago | yuc5 | Yucca5: transcribed in the root apex (0-5mm) | 7.02 | GRMZM2G132489
| Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791 | | Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: June 17th, 2016
|
| 33 days ago | zrp2 | Zea root protein2: cDNA expressed in roots and stems | 1.07 | GRMZM2G106980
| Gan, D et al. 2011. Mol Biol Rep 38:4553-4563 | | Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: July 28th, 2016
|
| 33 days ago | burp8 | BURP domain-containing protein-RD22-like8: | 4.05 | GRMZM2G147756
| Gan, D et al. 2011. Mol Biol Rep 38:4553-4563 | | Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
|
| 33 days ago | pop1 | putative organelle permease1 : | | GRMZM2G078154
| | | Variation: August 18th, 2017
Gene Model: August 18th, 2017
|
| 33 days ago | burp1 | BURP domain-containing protein-RD22-like1: Water deficit caused an 18-fold increase in the expression; expression is not influenced by ABA | | GRMZM2G446170
| Phillips, K; Ludidi, N. 2017. Sci. Rep. 7:8821 | | Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
|
| 33 days ago | burp2 | BURP domain-containing protein-RD22-like2: Water deficit caused a 1.6-fold increase in the expression; expression up-regulated by ABA. | | GRMZM5G800586
| Phillips, K; Ludidi, N. 2017. Sci. Rep. 7:8821 | | Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
|
| 33 days ago | burp3 | BURP domain-containing protein-RD22-like3: | | GRMZM2G032145
| Gan, D et al. 2011. Mol Biol Rep 38:4553-4563 | | Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
|
| 33 days ago | burp5 | BURP domain-containing protein-RD22-like5: | | GRMZM2G108422
| Gan, D et al. 2011. Mol Biol Rep 38:4553-4563 | | Reference: August 18th, 2017
Gene Product: August 18th, 2017
Gene Model: August 18th, 2017
|
| 33 days ago | burp6 | BURP domain-containing protein-RD22-like6: | | GRMZM2G113229
| Gan, D et al. 2011. Mol Biol Rep 38:4553-4563 | | Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
|
| 33 days ago | burp7 | BURP domain-containing protein-RD22-like7: | | GRMZM2G146665
| Gan, D et al. 2011. Mol Biol Rep 38:4553-4563 | | Reference: August 18th, 2017
Gene Product: August 18th, 2017
Gene Model: August 18th, 2017
|
| 33 days ago | burp9 | BURP domain-containing protein-RD22-like9: | | GRMZM2G406170
| Gan, D et al. 2011. Mol Biol Rep 38:4553-4563 | | Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
|
| 33 days ago | burp4 | BURP domain-containing protein-RD22-like4: | 7.03 | GRMZM2G078779
| Gan, D et al. 2011. Mol Biol Rep 38:4553-4563 | | Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
|
| 34 days ago | csu323 | : similar to Arabidopsis 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | 1.04 | GRMZM2G036543
| Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST | | Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 17th, 2017
|
| 34 days ago | umc1297 | : similar to Arabidopsis haloacid dehalogenase-like hydrolase domain-containing protein | 1.05 | GRMZM2G086869
| | | Variation: October 12th, 2016
Gene Model: August 17th, 2017
|
| 35 days ago | incw1 | cell wall invertase1: full-length cDNA, similar to tobacco and carrot cell-wall invertase; Northerns specific to cell suspension and developing endosperm 28-32 DAP; expressed protein cross-reacts with antibodies to carrot cell-wall invertase; low copy number | 5.04 | | Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708 | | Reference: August 16th, 2017
Gene Product: January 14th, 2013
Variation: May 27th, 2015
|
| 35 days ago | mn1 | miniature seed1: small, somewhat defective kernel, fully viable; invertase reduced | 2.04 | | Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708 | | Reference: August 16th, 2017
Gene Product: January 14th, 2013
Variation: April 13th, 2015
|
| 35 days ago | csu452 | : | 1.04 | GRMZM2G077897
| | | Variation: September 1st, 2003
Gene Model: August 16th, 2017
|
| 35 days ago | les22 | lesion22: (was Les*-J2552, les29) dominant leaf lesions,early-medium timing, small size, white color; porphyria | 1.04 | GRMZM2G044074
| Mei, Y et al. 2016. Plant Physiol pp.DOI: 10.1104/pp.16.00172 | | Reference: May 3rd, 2016
Gene Product: September 1st, 2003
Variation: April 1st, 2015
Gene Model: August 16th, 2017
|
| 35 days ago | umc1103 | : | 7.04 | GRMZM2G414043
| Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708 | | Reference: August 16th, 2017
Variation: August 16th, 2017
Gene Model: August 16th, 2017
|
| 35 days ago | sbp13 | SBP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708 | | Reference: August 16th, 2017
Gene Product: December 18th, 2014
|
| 35 days ago | hct12 | hydroxycinnamoyltransferase12: | | GRMZM2G179703
| Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708 | | Reference: August 16th, 2017
Gene Product: November 7th, 2015
Gene Model: May 18th, 2016
|
| 35 days ago | dek36 | defective kernel36: mutant kernels have a small and collapsed appearance at maturity, with a drastic size reduction in both embryo and endosperm; encodes an E+ subgroup PPR protein | | GRMZM5G892151
| Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708 | At4g21300 (TAIR) | Reference: August 16th, 2017
Gene Product: December 27th, 2016
Variation: March 13th, 2017
Gene Model: March 13th, 2017
|
| 35 days ago | incw5 | invertase cell wall5: | | GRMZM2G095725
| Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708 | LOC_Os04g33740 (MSU/TIGR) | Reference: August 16th, 2017
Gene Product: January 14th, 2013
Variation: August 16th, 2017
Gene Model: August 16th, 2017
|
| 36 days ago | syd1 | splayed ATPase1: | 6.05 | GRMZM2G467799
| Nelissen, H et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00269 | | Reference: July 2nd, 2015
Variation: September 1st, 2003
Gene Model: August 15th, 2017
|
| 36 days ago | atg13c | autophagy13c: | 2.03 | GRMZM5G825909
| Li, F et al. 2015. Plant Cell 27:1389-1408 | | Reference: August 15th, 2017
Variation: July 29th, 2004
Gene Model: August 15th, 2017
|
| 36 days ago | pik1 | phosphatidylinositol 3-kinase1: | 4.05 | | Li, F et al. 2015. Plant Cell 27:1389-1408 | | Reference: August 15th, 2017
Gene Product: September 1st, 2003
Variation: September 25th, 2007
|
| 36 days ago | atg12 | autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development. | | GRMZM5G842517
| Li, F et al. 2015. Plant Cell 27:1389-1408 | | Reference: August 15th, 2017
Variation: August 15th, 2017
Gene Model: August 15th, 2017
|
| 36 days ago | vps2 | vacuolar protein sorting2: | | GRMZM2G179662
| Li, F et al. 2015. Plant Cell 27:1389-1408 | | Reference: August 15th, 2017
Gene Product: August 15th, 2017
Gene Model: August 15th, 2017
|
| 36 days ago | atg8b | autophagy8b: | 10.06 | GRMZM2G419694
| Li, F et al. 2015. Plant Cell 27:1389-1408 | | Reference: August 15th, 2017
Variation: March 31st, 2005
Gene Model: August 15th, 2017
|
| 36 days ago | atg16L | autophagy16L: | 1.10 | GRMZM2G078252
| Li, F et al. 2015. Plant Cell 27:1389-1408 | | Reference: August 15th, 2017
Variation: August 15th, 2017
Gene Model: August 15th, 2017
|
| 37 days ago | zmm14 | Zea mays MADS14: during spikelet development zmm4 probably works as a selector gene which is involved in distinguishing the upper and lower floret | 1.02 | GRMZM2G099522
| Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Variation: August 28th, 2013
Gene Model: August 14th, 2017
|
| 37 days ago | dhar2 | dehydroascorbate reductase like2: | | GRMZM2G005710
| | | Gene Product: March 28th, 2013
Gene Model: August 14th, 2017
|
| 41 days ago | c2 | colorless2: colorless aleurone, reduced plant and cob color; C2-Idf dominant inhibitor; duplicate factor with whp1 for pollen color and for anthocyanins | 4.08 | | Eloy, NB et al. 2016. Plant Physiol 173:998-1016 | | Reference: August 10th, 2017
Gene Product: September 1st, 2003
Variation: November 14th, 2013
|
| 41 days ago | AY110435 | : | 6.05 | AC204292.4_FG006
| | | Variation: July 29th, 2004
Gene Model: August 10th, 2017
|
| 43 days ago | IDPC175 | : Sequence shows similarity to Arabidopsis HSP18.2 | 1.03 | GRMZM2G481529
| | | Variation: August 8th, 2017
Gene Model: August 8th, 2017
|
| 43 days ago | bnlg1953 | : similar to Arabidopsis C2H2-like zinc finger protein | 1.02 | GRMZM2G171073
| | | Variation: September 1st, 2003
Gene Model: August 8th, 2017
|
| 43 days ago | dng1 | DNA glycosylase superfamily protein1: | 1.02 | GRMZM2G005844
| | | Variation: August 8th, 2017
Gene Model: July 11th, 2017
|
| 43 days ago | mmp66 | : Similar to Arabidopsis and Medicago trunculata Phosphatidylinositol-4-phosphate 5-kinase | 1.03 | GRMZM2G073591
| | | Variation: August 8th, 2017
Gene Model: August 8th, 2017
|
| 43 days ago | rte1 | rotten ear1: mutants show distinct defects in vegetative and reproductive development, eventually causing widespread sterility in its tassel and ear. | 1.05 | GRMZM2G166159
| Chatterjee, M et al. 2017. Genetics 206:2041-2051 | | Reference: August 8th, 2017
Gene Product: June 24th, 2017
Variation: July 21st, 2014
Gene Model: July 19th, 2014
|
| 43 days ago | rte2 | rotten ear2: mutants strongly enhance the phenotype of rte1 mutants in soils with low boron content, producing shorter plants that fail to form all reproductive structures | | GRMZM2G082203
| Chatterjee, M et al. 2017. Genetics 206:2041-2051 | | Reference: August 8th, 2017
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
|
| 43 days ago | rte3 | rotten ear3: phylogenetically related to Class II clade boron transporters | | GRMZM2G051753
| Chatterjee, M et al. 2017. Genetics 206:2041-2051 | | Reference: August 8th, 2017
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
|
| 43 days ago | rte4 | rotten ear4: phylogenetically related to Class II clade boron transporters | | GRMZM2G374989
| Chatterjee, M et al. 2017. Genetics 206:2041-2051 | | Reference: August 8th, 2017
Gene Product: June 24th, 2017
Gene Model: June 24th, 2017
|
| 43 days ago | rte5 | rotten ear5: phylogenetically related to Class II clade boron transporters | | GRMZM2G302559
| Chatterjee, M et al. 2017. Genetics 206:2041-2051 | | Reference: August 8th, 2017
Gene Product: June 24th, 2017
Gene Model: June 24th, 2017
|
| 43 days ago | rte6 | rotten ear6: phylogenetically related to Class II clade boron transporters | | GRMZM2G454327
| Chatterjee, M et al. 2017. Genetics 206:2041-2051 | | Reference: August 8th, 2017
Gene Product: June 24th, 2017
Gene Model: June 24th, 2017
|
| 46 days ago | dhn13 | dehydrin13: | 1.09 | GRMZM2G169372
| Liu, Y et al. 2017. Sci. Rep. 7:7361 | | Reference: August 5th, 2017
Gene Product: August 5th, 2017
Variation: October 13th, 2016
Gene Model: October 14th, 2016
|
| 46 days ago | dhn6 | dehydrin6: | 3.07 | GRMZM2G031308
| Chen, J et al. 2002. Unpublished submission to Genbank Jan 2002 | | Reference: July 15th, 2008
Gene Product: August 5th, 2017
Variation: February 9th, 2014
Gene Model: July 27th, 2016
|
| 46 days ago | rps15 | ribosomal proteinS15: cDNA sequences, SSR umc1564 | 5.02 | GRMZM5G869564
| | | Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 5th, 2017
|
| 46 days ago | dhn3 | dehydrin3: | 4.06 | GRMZM2G373522
| | | Gene Product: August 5th, 2017
Variation: June 18th, 2011
Gene Model: October 16th, 2016
|
| 46 days ago | dhn7 | dehydrin7: | | GRMZM2G002786
| Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194 | | Reference: January 11th, 2009
Gene Product: August 5th, 2017
Variation: February 9th, 2014
Gene Model: July 27th, 2016
|
| 46 days ago | stk4 | serine-threonine kinase4: Expression responds to available phosphate, and its expression up-regulated under phosphate starvation. | | GRMZM2G156013
| Azad, I; Alemzadeh, A. 2017. Molecular Cell Biology Research Communications 6:65-75 | | Reference: August 5th, 2017
Gene Product: May 13th, 2014
Variation: August 5th, 2017
Gene Model: August 5th, 2017
|
| 46 days ago | dhn14 | dehydrin14: | | GRMZM2G448511
| Liu, Y et al. 2017. Sci. Rep. 7:7361 | | Reference: August 5th, 2017
Gene Product: August 5th, 2017
Gene Model: August 5th, 2017
|
| 47 days ago | rpe1 | Ribulose-phosphate 3-epimerase1: | 1.02 | | | | Variation: August 4th, 2017
|
| 47 days ago | mmp135 | : similar to Arabidopsis no pollen germination related 1 | 1.02 | GRMZM2G015219
| | | Variation: August 4th, 2017
Gene Model: August 4th, 2017
|
| 47 days ago | ras11E1 | ras-related protein11E1: | | GRMZM2G164527
| | | Variation: January 24th, 2011
Gene Model: August 4th, 2017
|
| 49 days ago | roa1 | replication origin activator1: cDNA Z29368, homology with yeast and vertebrate DNA licensing activity; orthologs in barley and Arabidopsis, highly conserved | | GRMZM2G100639
| Sabelli, PA et al. 2009. Proc Natl Acad Sci, USA 106:4042??4047 | | Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Variation: January 21st, 2011
Gene Model: June 1st, 2017
|
| 49 days ago | mcm2 | minichromosome maintenance2: a cell cycle gene regulated by tb1 | 3.05 | GRMZM2G112074
| Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | AT4G02060 (TAIR) | Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Variation: July 31st, 2017
Gene Model: July 30th, 2017
|
| 49 days ago | mcm1 | minichromosome maintenance1: | | GRMZM2G065205
| Sabelli, PA et al. 2009. Proc Natl Acad Sci, USA 106:4042??4047 | AT4G02060 (TAIR) | Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Gene Model: July 30th, 2017
|
| 49 days ago | mcm6 | minichromosome maintenance6: Essential for both vegetative as well as reproductive growth and development in plants. | | GRMZM2G021069
| Dresselhaus, T et al. 2006. Plant Physiol 140:512-527 | AT5G44635 (TAIR) | Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Gene Model: July 31st, 2017
|
| 49 days ago | mcm7 | minichromosome maintenance7: | | GRMZM2G139894
| Sabelli, PA et al. 2009. Proc Natl Acad Sci, USA 106:4042??4047 | | Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Gene Model: July 31st, 2017
|
| 49 days ago | mcm4 | minichromosome maintenance4: | | GRMZM2G066101
| Sabelli, PA et al. 2009. Proc Natl Acad Sci, USA 106:4042??4047 | | Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Gene Model: July 31st, 2017
|
| 49 days ago | mcm5 | minichromosome maintenance5: | 5.08 | GRMZM2G075978
| Sabelli, PA et al. 2009. Proc Natl Acad Sci, USA 106:4042??4047 | | Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Gene Model: July 31st, 2017
|
| 50 days ago | bnlg149 | : | 1.00 | GRMZM5G833153
| | | Variation: September 1st, 2003
Gene Model: August 1st, 2017
|
| 50 days ago | krp17 | kinesin heavy chain17: | 1.01 | GRMZM2G092232
| | | Variation: September 1st, 2003
Gene Model: August 1st, 2017
|
| 50 days ago | aic1 | auxin import carrier1: cDNA encoding a protein with a deduced amino acid showing 73% identity to AtAUX1. | 1.05 | GRMZM2G129413
| Huang, C-F et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1709171114 | AT2G21050 (TAIR) | Reference: August 1st, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 21st, 2015
|
| 50 days ago | pin4 | PIN-formed protein4: auxin efflux carriter similar to Arabidopsis PIN1 (Forestan et al 2012), but from PIN clade not found in all flowering plants save for the Brassicacease (O'Connor 2014 et al | 4.08 | GRMZM2G171702
| Huang, C-F et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1709171114 | | Reference: August 1st, 2017
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
|
| 50 days ago | aic2 | auxin import carrier2: | | GRMZM2G045057
| Huang, C-F et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1709171114 | AT2G21050 (TAIR) | Reference: August 1st, 2017
Gene Product: September 1st, 2003
Variation: August 1st, 2017
Gene Model: August 1st, 2017
|
| 50 days ago | pin2 | PIN-formed protein2: see pin1 | 5.06 | GRMZM2G074267
| Huang, C-F et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1709171114 | | Reference: August 1st, 2017
Gene Product: April 21st, 2014
Variation: June 11th, 2007
Gene Model: June 7th, 2012
|
| 50 days ago | pin1 | PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers. | 9.01 | GRMZM2G398650
| Huang, C-F et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1709171114 | | Reference: August 1st, 2017
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: June 7th, 2012
|
| 51 days ago | cg1 | corngrass1: semidominant Cg1 plants have narrow leaves, extreme tilleringCg1 encodes two tandem miR156 genes that are overexpressed in the meristem and lateral organs. George Chuck, 2007 | 3.02 | GRMZM2G022489
| Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: June 17th, 2016
Variation: August 25th, 2011
Gene Model: April 5th, 2013
Recommended by George Chuck:
September 25th, 2007
|
| 51 days ago | pcna2 | proliferating cell nuclear antigen2: a cell cycle gene regulated by tb1 | 4.07 | GRMZM2G108712
| Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: September 1st, 2003
Variation: August 23rd, 2014
Gene Model: August 23rd, 2014
Recommended by Ed Coe:
January 8th, 2008
|
| 51 days ago | gt1 | grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade | 1.04 | GRMZM2G005624
| Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
|
| 51 days ago | tb1 | teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1) | 1.09 | | Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
|
| 51 days ago | tu1 | tunicate1: dominant Tu1 ears develop long glumes enclosing individual kernels; tassels develop large, coarse glumes and sex reversal; both inflorescences become grossly vegetative and sterile in homozygotes | 4.08 - 4.08 | GRMZM2G370777
| Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: June 12th, 2012
Variation: February 3rd, 2011
Gene Model: May 9th, 2012
|
| 51 days ago | not1 | neighbor of tga1: compared to tga1, expressed much higher in maize than teosinte; INDEL probe (Preston et al 2011) | | AC233751.1_FG002
| Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
|
| 51 days ago | tga1 | teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte | 4.05 | GRMZM2G101511
| Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
|
| 51 days ago | phyB1 | phytochromeB1: phyB1 mutants have elongated mesocotyl under red light. Double mutant with phyB2 is pale, narrow with elongated leaf blades, elongated internodes, less anthocyanin in sheath tissues, and earlier flowering time. | 1.03 | | Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: October 24th, 2007
Variation: February 1st, 2015
|
| 51 days ago | zap1 | zea apetala homolog1: | 2.10 | | Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Variation: February 2nd, 2011
|
| 51 days ago | zmm2 | Zea mays MADS2: cDNA similar to zag1 (Schmidt et al., 1993), and to AGAMOUS of Arabidopsis; zmm2 and zag1, like zmm1 and zag2, are possibly duplications phylogenetically; expression preferentially in the tassel | 8.03 | | Kelliher, T et al. 2014. Frontiers Plant Sci 5:347 | | Reference: August 8th, 2014
Gene Product: September 1st, 2003
Variation: July 31st, 2017
|
| 51 days ago | zag1 | Zea AGAMOUS homolog1: amino acid sequence, deduced from cDNA to inflorescence mRNA, 61% identical to Arabidopsis floral homeotic gene protein AG1; expression strong in female inflorescence; possibly pt1; SSR umc1187 | 6.05 | | Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: September 1st, 2003
Variation: January 2nd, 2015
|
| 51 days ago | zag2 | Zea AGAMOUS homolog2: amino acid sequence, deduced from cDNA sequence, has 49% identity to Arabidopsis, floral homeotic gene product; expression restricted to female inflorescence; near ts4 | 3.05 - 3.05 | | Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: April 1st, 2011
Variation: October 22nd, 2014
|
| 51 days ago | yab12 | C2C2-YABBY-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | GRMZM2G167824
| Studer, AJ et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300071 | | Reference: July 31st, 2017
Gene Product: October 16th, 2015
Gene Model: July 3rd, 2012
|
| 51 days ago | fen1 | flap endonuclease1: required for DNA repair | 6.07 | GRMZM2G121262
| Dresselhaus, T et al. 2006. Plant Physiol 140:512-527 | AT5G26680 (TAIR) | Reference: July 31st, 2017
Gene Product: July 31st, 2017
Variation: July 31st, 2017
Gene Model: July 31st, 2017
|
| 55 days ago | wc1 | white cap1: dominant Wc1 kernels have pale yellow endosperm if Y1 (pearly white with y1); whiteness is emphasized in soft-starch crowns | 9.07 | | Tan, BC, et al. 2017. Genetics. 206:135-150 | | Reference: July 27th, 2017
Gene Product: September 20th, 2012
Variation: October 5th, 2012
|
| 55 days ago | hac101b | histone acetyltransferase101b: | 1.05 | GRMZM2G335438
| | | Gene Product: November 6th, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2017
|
| 55 days ago | drl2 | drooping leaf2: mutant enhances the phenotype of ifa1 mutants (a.k.a. drl1) | 9.06 | GRMZM2G102218
| Strable, J, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00477 | AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR) | Reference: July 27th, 2017
Gene Product: October 16th, 2015
Variation: July 12th, 2017
Gene Model: October 16th, 2015
|
| 55 days ago | ifa1 | indeterminate floral apex1: mutants have perturbed floral and inflorescence meristems as well as droopy leaves with increased angle | | GRMZM2G088309
| Strable, J, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00477 | AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR) | Reference: July 27th, 2017
Gene Product: October 16th, 2015
Variation: July 13th, 2017
Gene Model: October 16th, 2015
|
| 55 days ago | hyd6 | hydroxylase6: beta-carotene hydroxylase | | GRMZM5G826824
| Owens, BF, et al. 2014. Genetics. 198:1699-1716 | | Reference: January 1st, 2015
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: July 27th, 2017
|
| 55 days ago | imd4 | isopropylmalate dehydrogenase4: | | GRMZM2G120857
| | | Gene Product: September 1st, 2003
Gene Model: July 27th, 2017
|
| 57 days ago | myb3 | : single copy; encodes WD-repeat protein | 5.04 | GRMZM2G099334
| Carey, C; Strahle, JT; Selinger, D; Chandler, V. 2004. Plant Cell. 16:450-464 | | Reference: June 7th, 2004
Gene Product: July 25th, 2017
Variation: May 28th, 2015
Gene Model: May 28th, 2015
|
| 57 days ago | myb89 | MYB-transcription factor 89: homology to R2R3 Myb genes | | GRMZM2G040924
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: July 25th, 2017
Gene Model: June 24th, 2016
|
| 57 days ago | mybr36 | MYB-related-transcription factor 36: single copy genomic; similar to R2R3 Myb genes | 2.02 | GRMZM2G014534
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: July 25th, 2017
Gene Model: June 23rd, 2016
|
| 57 days ago | myb14 | MYB-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Xiao, QL et al. 2017. FEBS J pp.doi: 10.1111/febs.14179 | | Reference: July 21st, 2017
Gene Product: July 25th, 2017
|
| 57 days ago | fdx3 | ferredoxin3: ubiquitous, cDNA clone, gene specific probe, amino acid sequence; SSR umc1064, pFD3 | 1.11 | GRMZM2G053458
| Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: January 29th, 2015
Gene Model: July 25th, 2017
|
| 57 days ago | myb45 | MYB-transcription factor 45: single copy genomic clone asg8 contains myb motifNCBI: myb domain protein 4r1Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 7.01 | GRMZM2G051793
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Gene Product: July 25th, 2017
Gene Model: April 7th, 2017
|
| 58 days ago | te1 | terminal ear1: stalked ear appendages at tip; varying to infolded ears | 3.05 | | Mendes-Moreira, P et al. 2015. PLoS One 10:e0124543 | | Reference: April 30th, 2015
Gene Product: September 1st, 2003
Variation: July 24th, 2017
|
| 58 days ago | wrky122 | WRKY-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Hong, CY et al. 2016. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2016.12.064 | | Reference: December 14th, 2016
Gene Product: July 24th, 2017
Variation: December 14th, 2016
|
| 58 days ago | wrky29 | WRKY-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: July 24th, 2017
|
| 58 days ago | wrky98 | WRKY-transcription factor 98: NCBI: probable WRKY transcription factor 12 (similarity to Arabidpsis gene)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 4.06 | GRMZM2G377217
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: July 24th, 2017
Variation: March 15th, 2017
Gene Model: March 15th, 2017
|
| 58 days ago | wrky16 | WRKY-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 4.08 | GRMZM2G063216
| Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: July 24th, 2017
Gene Model: December 6th, 2016
|
| 58 days ago | nl3 | narrow leaf3: mutant leaves are ~12% narrower | | | Brewbaker, JL. 2010. MNL 84:in press | | Reference: July 24th, 2017
Variation: January 21st, 2011
|
| 58 days ago | lw5 | lemon white5: Duplicate factor for lemon endosperm/white seedling with lw6 (Stinard, MNL 86). | | | Stinard, PS. 2013. MNL 86:29-31 | | Reference: March 10th, 2014
Variation: July 24th, 2017
|
| 58 days ago | lw6 | lemon white6: Duplicate factor for lemon endosperm/white seedling with lw5 (Stinard, MNL 86). | | | Stinard, PS. 2013. MNL 86:29-31 | | Reference: March 10th, 2014
Variation: July 24th, 2017
|
| 60 days ago | ga20ox1 | gibberellin 20-oxidase1: | 1.12 | AC203966.5_FG005
| Nelissen, H et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12801 | | Reference: July 22nd, 2017
Gene Product: October 28th, 2014
Gene Model: October 27th, 2014
|
| 61 days ago | bt1 | brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5) | 5.04 | | Xiao, QL et al. 2017. FEBS J pp.doi: 10.1111/febs.14179 | | Reference: July 21st, 2017
Gene Product: February 24th, 2015
Variation: January 28th, 2014
|
| 62 days ago | bnlg2238 | : | 1.04 | GRMZM2G016480
| | | Variation: September 1st, 2003
Gene Model: July 20th, 2017
|
| 62 days ago | bnlg2295 | : | 1.04 | GRMZM2G143703
| | | Variation: September 29th, 2010
Gene Model: July 20th, 2017
|
| 62 days ago | ko1 | kaurene oxidase1: | | GRMZM2G059308
| Mao, HJ et al. 2017. Biotechnol Lett pp.doi: 10.1007/s10529-017-2401-7 | | Reference: July 20th, 2017
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
|
| 62 days ago | ko2 | kaurene oxidase2: | | GRMZM2G161472
| Mao, HJ et al. 2017. Biotechnol Lett pp.doi: 10.1007/s10529-017-2401-7 | | Reference: July 20th, 2017
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
|
| 64 days ago | lox3 | lipoxygenase3: | 3.06 | | Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: November 14th, 2014
|
| 64 days ago | ts1 | tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops | 2.04 - 2.05 | | Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
|
| 64 days ago | lox10 | lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles | 4.09 | GRMZM2G018424
| Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 6th, 2014
Gene Model: October 23rd, 2013
|
| 64 days ago | lox6 | lipoxygenase6: | 2.02 | GRMZM2G040095
| Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
Gene Model: June 10th, 2014
|
| 64 days ago | lox1 | lipoxygenase1: Full length cDNA is expressed in E. coli (Kim et al. 2003) | 3.06 | | Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: November 13th, 2014
Variation: July 24th, 2008
|
| 64 days ago | lox2 | lipoxygenase2: | 3.06 | GRMZM2G156861
| Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: July 18th, 2017
Gene Model: June 10th, 2014
|
| 64 days ago | lox4 | lipoxygenase4: | 1.09 | GRMZM2G109056
| Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
Gene Model: June 10th, 2014
|
| 64 days ago | lox5 | lipoxygenase5: | 5.02 | GRMZM2G102760
| Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
Gene Model: June 10th, 2014
|
| 64 days ago | lox7 | lipoxygenase7: | 10.04 | GRMZM2G070092
| Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: April 23rd, 2009
Gene Model: June 10th, 2014
|
| 64 days ago | lox9 | lipoxygenase9: | 1.02 | GRMZM2G017616
| Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 12th, 2014
Gene Model: October 23rd, 2013
|
| 64 days ago | lox11 | lipoxygenase11: | 5.04 | GRMZM2G009479
| Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 10th, 2014
Gene Model: June 10th, 2014
|
| 64 days ago | lox12 | lipoxygenase12: single copy, required for resistance to Fusarium stalk and ear rot | 3.04 | GRMZM2G106748
| Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: November 13th, 2014
Variation: August 15th, 2014
Gene Model: June 10th, 2014
|
| 64 days ago | lox13 | lipoxygenase13: | | GRMZM5G822593
| Ogunola, OF et al. 2017. PLoS One 12:e0181265 | | Reference: July 18th, 2017
Gene Product: June 11th, 2014
Gene Model: July 18th, 2017
|
| 67 days ago | pspb2 | photosystem II oxygen evolving polypeptide2: sequence highly similar to OEC23 oxygen evolving complex protein of photosystem II; located peripheral to lumenal side of thylakoid (Huang et al 2013) | | GRMZM2G047954
| Huang, M et al. 2013. J Proteome Res 12:491-504 | | Reference: August 5th, 2014
Gene Product: September 1st, 2003
Gene Model: July 15th, 2017
|
| 67 days ago | pspb1 | photosystem II oxygen evolving polypeptide1: sequence similar to OEC23 photosystem II polypeptide; located by Huang et al 2013 to thylakoid peripheral on lumen side | | GRMZM2G016677
| Huang, M et al. 2013. J Proteome Res 12:491-504 | | Reference: August 5th, 2014
Gene Product: September 1st, 2003
Gene Model: July 15th, 2017
|
| 68 days ago | bnlg1564 | : | 1.07 | GRMZM5G821828
| | | Variation: September 1st, 2003
Gene Model: July 14th, 2017
|
| 69 days ago | umc1627 | : cDNA sequences; SSR umc1627; see also loci probed by umc171 and npi472 | 8.03 | GRMZM2G156857
| Sheen, J et al. 1987. Plant Mol Biol 9:217-226 | | Reference: September 1st, 2003
Variation: July 13th, 2017
Gene Model: July 14th, 2015
|
| 70 days ago | bnlg1484 | : | 1.03 | GRMZM2G019567
| | | Variation: September 1st, 2003
Gene Model: July 12th, 2017
|
| 70 days ago | bnlg1556 | : | 1.07 | GRMZM2G028726
| | | Variation: September 1st, 2003
Gene Model: July 12th, 2017
|
| 71 days ago | bnlg1014 | : | 1.01 | GRMZM2G020548
| | | Variation: September 1st, 2003
Gene Model: July 11th, 2017
|
| 71 days ago | bnlg1025 | : | 1.07 | GRMZM2G078088
| | | Variation: September 1st, 2003
Gene Model: July 11th, 2017
|
| 71 days ago | bnlg1331 | : | 1.09 | GRMZM2G466385
| | | Variation: September 1st, 2003
Gene Model: July 11th, 2017
|
| 73 days ago | elfg1 | elongation factor gamma1: endosperm cDNA 5C04C04 (uaz161), similar to Trypanosoma translation factor | 6.04 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: July 9th, 2017
|
| 73 days ago | elfa11 | elongation factor alpha11: | | AC233866.1_FG006
| | | Variation: July 9th, 2017
Gene Model: July 8th, 2017
|
| 74 days ago | ms7 | male sterile7: like ms2; tapetal cell dysfunction | 7.02 | GRMZM5G890224
| Zhang, DF et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12786 | AT5G22260 (TAIR)
LOC_Os09g27620 (MSU/TIGR)
Os09g0449000 (Gramene) | Reference: July 6th, 2017
Gene Product: July 8th, 2017
Variation: July 6th, 2017
Gene Model: July 6th, 2017
|
| 74 days ago | iaa28 | Aux/IAA-transcription factor 28: gene product physically interacts with LA1 (Dong et al 2013)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Dong, Z, et al. 2013. Plant Physiol. 163:1306-1322 | | Reference: November 22nd, 2013
Variation: July 8th, 2017
|
| 74 days ago | dof47 | C2C2-Dof-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Chen, Y; Cao, J. 2014. Plant Mol Biol Rep pp.doi: 10.1007/s11105-014-0835-9 | | Reference: November 26th, 2014
Variation: July 8th, 2017
|
| 74 days ago | elfa1 | elongation factor alpha1: (was csu116) multiple copies; leaf cDNA csu116, partial sequence identical to a tomato elongation factor | 8.03 | GRMZM2G151193
| Berberich, T et al. 1995. Plant Mol Biol 29:611-615 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 8th, 2017
Gene Model: July 8th, 2017
|
| 74 days ago | eif2 | elongation initiation factor2: etiolated leaf cDNA 6C02E11(uaz224) similar to eIF-2 gamma chain | 7.04 | GRMZM2G107654
| Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: July 8th, 2017
Gene Model: January 13th, 2015
|
| 74 days ago | cyp13 | cytochrome P450 13: encodes CYP97A | | GRMZM5G837869
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: April 8th, 2013
Variation: July 8th, 2017
Gene Model: April 8th, 2013
|
| 75 days ago | ccamk1 | calcium/calmodulin dependent protein kinase1: involved in ABA signaling (Ma et al 2012) | | GRMZM2G062772
| Ma, F; et al. 2012. J Exp Bot. 63:4835-47 | | Reference: April 23rd, 2013
Gene Product: December 3rd, 2013
Variation: July 7th, 2017
Gene Model: April 23rd, 2013
|
| 75 days ago | arftf11 | ARF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Petsch, KA et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00194 | | Reference: July 27th, 2015
Variation: July 7th, 2017
|
| 75 days ago | arftf23 | ARF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Petsch, KA et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00194 | | Reference: July 27th, 2015
Variation: July 7th, 2017
|
| 75 days ago | arftf26 | ARF-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Petsch, KA et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00194 | | Reference: July 27th, 2015
Variation: July 7th, 2017
|
| 75 days ago | fea4 | fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems. | | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: January 27th, 2015
Variation: July 7th, 2017
|
| 75 days ago | imp1 | importin1: leaf cDNA csu244 similar to importin | 8.03 | | Baysdorfer, C. 1994. cDNA sequence submission to dbEST | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 7th, 2017
|
| 75 days ago | mbd119 | methyl binding domain119: | 1.06 | GRMZM2G301098
| Springer, N; Kaeppler, SM. 2005. Plant Physiol 138:92-104 | | Reference: February 3rd, 2010
Gene Product: December 24th, 2015
Variation: February 6th, 2010
Gene Model: July 7th, 2017
|
| 75 days ago | cax3 | calcium exchanger3: Expression affected by ABP4, auxin, and Ca++. Homolog of Arabidopsis CAX1 involved in auxin transduction pathway. | 3.09 | GRMZM2G011592
| Jurisic-Knezev, D; Bergougnoux, V; Milde, D; Fellner, M. 2014. Botany. 92:332-339 | | Reference: June 5th, 2014
Variation: July 7th, 2017
Gene Model: June 6th, 2014
|
| 75 days ago | ao2 | aldehyde oxidase2: | 5.01 | GRMZM5G899851
| Owens, BF, et al. 2014. Genetics. 198:1699-1716 | | Reference: January 1st, 2015
Gene Product: October 4th, 2014
Gene Model: July 7th, 2017
|
| 75 days ago | abh4 | abscisic acid 8'-hydroxylase4: | 7.02 | GRMZM2G065928
| Vallabhaneni, R; Wurtzel, E. 2010. Arch Biochem Biophys. 504:112-7 | | Reference: February 15th, 2013
Gene Product: February 15th, 2013
Variation: March 31st, 2005
Gene Model: July 7th, 2017
|
| 76 days ago | cpps2 | copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005) | 1.04 | GRMZM2G044481
| Hu, SL et al. 2017. Frontiers Plant Sci 8:1039 | | Reference: July 6th, 2017
Gene Product: August 16th, 2012
Variation: December 28th, 2015
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
|
| 76 days ago | ga2ox1 | gibberellin 2-oxidase1: Bolduc and Hake (Plant Cell 21:1647-58, 2009) identify this ga2ox as ga2ox1 by phylogeny. See Supplemental Figure 6. Comparison of syntenic regions containing ga2ox1 in different
grasses. They also show that it is a direct target of KN1. | | GRMZM2G078798
| Hu, SL et al. 2017. Frontiers Plant Sci 8:1039 | | Reference: July 6th, 2017
Gene Product: October 27th, 2014
Variation: November 20th, 2012
Gene Model: November 20th, 2012
|
| 76 days ago | bnl9.11b(lts) | : | 1.04 | GRMZM2G067371
| | | Gene Product: September 1st, 2003
Gene Model: July 6th, 2017
|
| 76 days ago | bhlh43 | bHLH-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.08 | GRMZM2G165042
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: July 6th, 2017
|
| 76 days ago | pif3 | phytochrome interacting factor3: ortholog of Arabidopsis PIF3; nuclear localized protein; transgenic expression in rice suggest role in stress response (Gao Y et al 2015) | | GRMZM2G387528
| Hu, SL et al. 2017. Frontiers Plant Sci 8:1039 | AT1G09530 (TAIR)
LOC_Os05g04740 (MSU/TIGR) | Reference: July 6th, 2017
Gene Product: September 14th, 2016
Gene Model: May 26th, 2015
|
| 76 days ago | ga20ox5 | gibberellin 20-oxidase5: | | GRMZM2G060940
| Hu, SL et al. 2017. Frontiers Plant Sci 8:1039 | | Reference: July 6th, 2017
Gene Product: October 28th, 2014
Variation: July 6th, 2017
Gene Model: October 27th, 2014
|
| 76 days ago | kao2 | kaurenoic acid oxidase2: | | GRMZM2G089803
| Hu, SL et al. 2017. Frontiers Plant Sci 8:1039 | | Reference: July 6th, 2017
Gene Product: August 15th, 2012
Gene Model: October 29th, 2014
|
| 76 days ago | brc1 | brassinosteroid catabolism1: member of BR catabolic gene family | | GRMZM2G107322
| Hu, SL et al. 2017. Frontiers Plant Sci 8:1039 | AT2G26710 (TAIR)
LOC_Os02g11020 (MSU/TIGR) | Reference: July 6th, 2017
Gene Product: July 6th, 2017
Gene Model: July 6th, 2017
|
| 76 days ago | brc2 | brassinosteroid catabolism2: member of BR catabolic gene family | | GRMZM5G852663
| Hu, SL et al. 2017. Frontiers Plant Sci 8:1039 | AT2G26710 (TAIR)
LOC_Os02g11020 (MSU/TIGR) | Reference: July 6th, 2017
Gene Product: July 6th, 2017
Gene Model: July 6th, 2017
|
| 77 days ago | uaz248a(his3) | : | 1.04 | GRMZM2G176358
| Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 5th, 2017
Gene Model: July 5th, 2017
|
| 77 days ago | uaz248b(his3) | : | 5.05 | GRMZM2G176358
| Shen, B; Carneiro, N; Torres-Jerez, I; Stevenson, B; McCreery, T; Helentjaris, T; Baysdorfer, C; Alm. 1994. Plant Mol Biol 26:1085-1101 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: July 5th, 2017
|
| 82 days ago | sdg110b | : | 2.06 | | Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
|
| 82 days ago | crr8 | cytokinin response regulator8: | 1.02 | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: June 30th, 2017
Variation: April 25th, 2008
|
| 82 days ago | crr2 | cytokinin response regulator2: single copy, cDNA and genomic sequences; SSRs umc1569, umc1344; induced by cytokinin, and inorganic nitrogen | 10.07 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: June 30th, 2017
Variation: October 1st, 2015
|
| 82 days ago | crr1 | cytokinin response regulator1: single copy,cDNA and genomic sequences; induced in leaf by cytokinin, and inorganic nitrogen; SSR umc1622 | 2.01 - 2.01 | GRMZM2G040736
| Deji, A et al. 2002. Biosci Biotechnol Biochem 66: 1853-1858 | | Reference: July 14th, 2007
Gene Product: June 30th, 2017
Gene Model: October 23rd, 2013
|
| 82 days ago | arr1 | ARR-B-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: June 30th, 2017
|
| 82 days ago | arr2 | ARR-B-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: June 30th, 2017
|
| 82 days ago | arr4 | ARR-B-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: June 30th, 2017
|
| 82 days ago | arr5 | ARR-B-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: June 30th, 2017
|
| 82 days ago | arr7 | ARR-B-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: June 30th, 2017
|
| 82 days ago | sdg128 | set domain gene128: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Chen, LQ et al. 2017. Plant Physiol 174:1795-1806 | LOC_Os09g04890 (MSU/TIGR) | Reference: June 29th, 2017
Gene Product: June 30th, 2017
Variation: June 29th, 2017
|
| 82 days ago | mez1 | enhancer of zeste1: | 6.01 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: June 30th, 2017
Variation: July 3rd, 2015
|
| 82 days ago | mez2 | enhancer of zeste2: | 9.04 | GRMZM5G875502
| Springer, N et al. 2002. Plant Physiol 128:1332-1345 | | Reference: January 5th, 2011
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: July 28th, 2016
|
| 82 days ago | mez3 | enhancer of zeste3: | 1.03 | GRMZM2G043484
| Springer, N et al. 2002. Plant Physiol 128:1332-1345 | | Reference: January 5th, 2011
Gene Product: June 30th, 2017
Variation: September 1st, 2014
Gene Model: September 2nd, 2014
|
| 82 days ago | sdg101 | set domain gene101: | 7.02 | AC233961.1_FG001
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
|
| 82 days ago | sdg102 | set domain gene102: | 2.04 | GRMZM2G147619
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
|
| 82 days ago | sdg104 | SET domain-containing protein SET104: | 2.03 | | Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
|
| 82 days ago | sdg105 | set domain gene105: | 8.05 - 8.05 | | Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
|
| 82 days ago | sdg106 | set domain gene106: | 2.07 | GRMZM2G409213
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
|
| 82 days ago | sdg107 | set domain gene107: | 2.03 | GRMZM2G357972
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
|
| 82 days ago | sdg108 | set domain gene108: | 4.04 | GRMZM2G149153
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
|
| 82 days ago | sdg110a | set domain gene110a: | 7.02 | GRMZM2G130910
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
|
| 82 days ago | sdg111 | set domain gene111: | 6.06 | GRMZM2G117458
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
|
| 82 days ago | sdg113 | set domain gene113: | 3.06 | | Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
|
| 82 days ago | sdg115 | set domain gene115: | 3.08 | GRMZM2G033350
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
|
| 82 days ago | sdg116 | set domain gene116: | 2.07 | GRMZM2G105869
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
|
| 82 days ago | sdg118 | set domain gene118: | 8.06 | GRMZM2G054380
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
|
| 82 days ago | sdg119 | set domain gene119: | 2.06 | | Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
|
| 82 days ago | sdg123 | SET domain protein123: histone methylation; one of 3 with disrupted (S-ET) domains among 22 SET domain proteins | 1.08 | GRMZM2G080462
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: February 2nd, 2015
Gene Model: February 2nd, 2015
|
| 82 days ago | sdg129 | set domain gene129: | 5.03 | GRMZM2G305124
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
|
| 82 days ago | sdg122 | set domain gene122: | 1.02 | GRMZM2G091916
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
|
| 82 days ago | crr7 | cytokinin response regulator7: | | GRMZM2G096171
| Asakura, Y, et al. 2003. Plant Mol Biol. 52:331-341 | | Reference: August 9th, 2004
Gene Product: June 30th, 2017
Gene Model: December 19th, 2015
|
| 82 days ago | atx3 | arabidopsis trithorax homolog3: | | GRMZM2G372928
| Chen, LQ et al. 2017. Plant Physiol 174:1795-1806 | AT4G27910 (TAIR)
LOC_Os01g11952 (MSU/TIGR) | Reference: June 29th, 2017
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
|
| 82 days ago | atx4 | arabidopsis trithorax homolog4: | | GRMZM2G085266
| Chen, LQ et al. 2017. Plant Physiol 174:1795-1806 | AT4G27910 (TAIR)
LOC_Os01g11952 (MSU/TIGR) | Reference: June 29th, 2017
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
|
| 82 days ago | atx5 | arabidopsis trithorax homolog5: | | GRMZM2G179814
| Chen, LQ et al. 2017. Plant Physiol 174:1795-1806 | AT4G27910 (TAIR)
LOC_Os01g46700 (MSU/TIGR) | Reference: June 29th, 2017
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
|
| 82 days ago | sdg117 | set domain gene117: | | GRMZM2G172427
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
|
| 82 days ago | sdg127 | set domain gene127: | | GRMZM2G473138
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
|
| 82 days ago | sdg130 | set domain gene130: | | GRMZM2G457881
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
|
| 82 days ago | arr8 | ARR-B-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 5.08 | GRMZM2G479110
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: June 30th, 2017
Variation: June 30th, 2017
Gene Model: June 30th, 2017
|
| 82 days ago | crr5 | cytokinin response regulator5: | 3.05 | | Asakura, Y, et al. 2003. Plant Mol Biol. 52:331-341 | | Reference: August 9th, 2004
Gene Product: June 30th, 2017
Variation: March 31st, 2005
|
| 82 days ago | sdg103 | SET domain group 103: | | GRMZM2G074094
| Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925 | | Reference: October 16th, 2003
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
|
| 82 days ago | crr4 | cytokinin response regulator4: | 8.06 | GRMZM2G319187
| Asakura, Y, et al. 2003. Plant Mol Biol. 52:331-341 | | Reference: August 9th, 2004
Gene Product: June 30th, 2017
Gene Model: December 19th, 2015
|
| 82 days ago | asg75 | : NCBI: similar to Arabidopsis lipase class 3 family protein | 1.04 | GRMZM5G882821
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Variation: September 19th, 2009
Gene Model: June 30th, 2017
|
| 89 days ago | ali1 | aladin1: | | | | | Variation: June 23rd, 2017
|
| 3 months ago | umc2236 | : similar to Arabidopsis glutamate decarboxylase 1 based on LOC100501579 | 1.06 | GRMZM2G017110
| | | Variation: June 16th, 2017
Gene Model: June 16th, 2017
|
| 3 months ago | umc2230 | : NCBI:probable xyloglucan endotransglucosylase/hydrolase protein 27 | 1.05 | GRMZM2G070271
| | | Variation: January 10th, 2017
Gene Model: June 15th, 2017
|
| 3 months ago | umc2231 | : NCBI: vacuolar amino acid transporter 1-like | 1.05 | GRMZM2G017170
| | | Variation: January 10th, 2017
Gene Model: June 15th, 2017
|
| 3 months ago | umc1948 | : | 1.01 | GRMZM2G172758
| | | Variation: May 10th, 2016
Gene Model: June 14th, 2017
|
| 3 months ago | sirk1 | sucrose-induced receptor kinase1: expression is altered in response to drought stress | | GRMZM2G161664
| Aquino, B et al. 2017. Frontiers Plant Sci pp.doi: 10.3389/fpls.2017.00852 | AT5G10020 (TAIR) | Reference: June 14th, 2017
Gene Product: July 1st, 2015
Gene Model: June 13th, 2017
|
| 3 months ago | umc1603 | : | 1.05 | GRMZM2G127739
| | | Variation: November 17th, 2016
Gene Model: June 13th, 2017
|
| 3 months ago | fha2 | FHA-transcription factor 2: | 1.06 | GRMZM2G424241
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: June 9th, 2017
|
| 3 months ago | umc1111 | : Seed specific protein Bn15D14A | 1.11 | GRMZM2G163912
| | | Variation: September 21st, 2016
Gene Model: June 9th, 2017
|
| 3 months ago | umc1123 | : | 1.06 | GRMZM5G854901
| | | Variation: September 1st, 2003
Gene Model: June 9th, 2017
|
| 3 months ago | umc1128 | : CDPK-related kinase 3-like | 1.07 | GRMZM2G031893
| | | Variation: September 1st, 2003
Gene Model: June 9th, 2017
|
| 3 months ago | AY110479 | : | 1.11 | GRMZM2G087612
| | | Variation: July 29th, 2004
Gene Model: June 8th, 2017
|
| 3 months ago | AY110632 | : | 1.03 | GRMZM2G032047
| | | Variation: July 29th, 2004
Gene Model: June 8th, 2017
|
| 3 months ago | AY110640 | : similar to Arabidopsis RNA pseudouridine synthase 5 | 1.03 | GRMZM2G158261
| | | Variation: July 29th, 2004
Gene Model: June 8th, 2017
|
| 3 months ago | BE639426 | : | 1.10 | GRMZM2G301071
| | | Variation: July 29th, 2004
Gene Model: June 8th, 2017
|
| 3 months ago | hagtf3 | GNAT-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: June 7th, 2017
|
| 3 months ago | AY110052 | : | 1.03 | GRMZM2G141799
| | | Variation: September 25th, 2007
Gene Model: June 7th, 2017
|
| 3 months ago | AY110159 | : similar to M. trunculata Chloroplast inner envelope protein | 1.07 - 1.08 | GRMZM5G888696
| | | Variation: July 29th, 2004
Gene Model: June 7th, 2017
|
| 3 months ago | AY110296 | : similar to M. trunculata Ubiquitin and WLM domain-containing protein | 1.06 | GRMZM2G115981
| | | Variation: March 21st, 2006
Gene Model: June 7th, 2017
|
| 3 months ago | AY110396 | : | 1.05 | GRMZM2G110572
| | | Variation: July 29th, 2004
Gene Model: June 7th, 2017
|
| 3 months ago | AI855190 | : | 1.05 | GRMZM2G443525
| | | Variation: July 29th, 2004
Gene Model: June 6th, 2017
|
| 3 months ago | AY109916 | : | 1.12 | GRMZM2G422649
| | | Variation: July 29th, 2004
Gene Model: June 6th, 2017
|
| 3 months ago | cap2 | calcium pump2: paralog of cap1; calcium-transporting ATPase | 1.03 | GRMZM2G428096
| Subbaiah, C et al. 2017. Mol Plant-Microbe Interact pp.doi: 10.1094/MPMI-02-17-0026-R | | Reference: March 7th, 2017
Gene Product: May 20th, 2015
Variation: June 6th, 2017
Gene Model: June 6th, 2017
|
| 3 months ago | cat1 | catalase1: electrophoretic mobility; cytosolic/glyoxysomal; tetrameric; intra/interlocus hybrid bands occur | 5.03 | | Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
|
| 3 months ago | sod4 | superoxide dismutase4: electrophoretic mobility; cytosolic; Cu-Zn dimeric; intralocus hybrid bands occur; two similar sequences X17564 (sod4), X17565(sod4A) | 1.04 | | Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: February 12th, 2007
Variation: April 20th, 2005
|
| 3 months ago | cipk8 | calcineurin B-like-interacting protein kinase8: | | GRMZM2G383240
| Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469 | | Reference: June 5th, 2017
Gene Product: June 2nd, 2017
Variation: June 2nd, 2017
Gene Model: June 2nd, 2017
|
| 3 months ago | gsr1 | glutathione reductase1: single copy leaf cDNA csu111, similar to pea glutathione reductase | 1.01 | | Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: September 1st, 2003
Variation: January 30th, 2015
|
| 3 months ago | uce4 | ubiquitin conjugating enzyme4: | 2.01 | | Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: September 1st, 2003
Variation: July 29th, 2004
|
| 3 months ago | cbl1 | calcineurin B-like1: | | GRMZM2G107575
| Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469 | | Reference: June 5th, 2017
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 3 months ago | cbl9 | calcineurin B-like9: | | GRMZM2G015324
| Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469 | | Reference: June 5th, 2017
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 3 months ago | apx4 | ascorbate peroxidase4: | | GRMZM2G316256
| Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: September 1st, 2003
Variation: June 5th, 2017
Gene Model: June 5th, 2017
|
| 3 months ago | ucp1 | uncoupling protein1: | | GRMZM5G852877
| Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: June 5th, 2017
Variation: June 5th, 2017
Gene Model: June 5th, 2017
|
| 3 months ago | ucp2 | uncoupling protein2: | | GRMZM2G165629
| Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: June 5th, 2017
Gene Model: June 5th, 2017
|
| 3 months ago | znf3 | zinc finger protein3: | | | Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: April 4th, 2017
|
| 3 months ago | znf4 | zinc finger protein4: | | GRMZM2G048154
| Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: April 4th, 2017
Gene Model: June 5th, 2017
|
| 3 months ago | znf5 | zinc finger protein5: | | GRMZM2G001205
| Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: April 4th, 2017
Gene Model: June 5th, 2017
|
| 3 months ago | znf6 | zinc finger protein6: | | GRMZM5G804618
| Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: April 4th, 2017
Gene Model: June 5th, 2017
|
| 3 months ago | cbl4 | calcineurin B-like2: | 6.06 | GRMZM2G001221
| Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469 | | Reference: June 5th, 2017
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 3 months ago | mpk3 | MAP kinase3: transcript and protein activity upregulated by ABA and H2O2 | 1.03 | GRMZM2G017792
| Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013
|
| 3 months ago | ucp3 | uncoupling protein homolog3: | | GRMZM2G000510
| Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60 | | Reference: June 5th, 2017
Gene Product: June 5th, 2017
Variation: June 5th, 2017
Gene Model: June 5th, 2017
|
| 3 months ago | orc2 | origin recognition complex2: member of a complex having a role in recognition and binding to origins of DNA replication; evidence from yeast two-hybrid assays and expression profiles | | GRMZM2G117238
| Witmer, X et al. 2003. Putative subunits of the maize origin of replication recognition complex ZmORC1-ZmORC5. Nucl Acid Res 31:619-628 | | Reference: September 1st, 2003
Gene Model: June 3rd, 2017
Recommended by Marty Sachs:
March 7th, 2007
|
| 3 months ago | orc4 | origin recognition complex4: member of a complex having a role in recognition and binding to origins of DNA replication; evidence from yeast two-hybrid assays and expression profiles | | GRMZM5G876520
| Witmer, X et al. 2003. Putative subunits of the maize origin of replication recognition complex ZmORC1-ZmORC5. Nucl Acid Res 31:619-628 | | Reference: September 1st, 2003
Gene Model: June 3rd, 2017
Recommended by Marty Sachs:
March 7th, 2007
|
| 3 months ago | cda1 | cytidine deaminase1: | 7.02 | GRMZM2G082924
| Xu, JH; Messing, J. 2006. BMC Genetics. 7:52 | | Reference: August 26th, 2008
Gene Product: August 26th, 2008
Variation: February 7th, 2009
Gene Model: June 3rd, 2017
|
| 3 months ago | cda2 | cytidine deaminase2: | 2.06 | GRMZM2G008216
| Xu, JH; Messing, J. 2006. BMC Genetics. 7:52 | | Reference: August 26th, 2008
Gene Product: August 26th, 2008
Variation: February 7th, 2009
Gene Model: June 3rd, 2017
|
| 3 months ago | hat1 | histone acetyltransferase1: cDNA, genomic and peptide sequence; antibody cross-reactivity | 7.02 | GRMZM5G851405
| Lusser, A et al. 1999. Nucl Acid Res 27:4427-4435 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: January 28th, 2009
Gene Model: June 3rd, 2017
|
| 3 months ago | maf1 | MFP1 attachment factor1: cDNA | | GRMZM2G479245
| Gindullis, F et al. 1999. Plant Cell 115:1755-1767 | | Reference: October 11th, 2010
Gene Product: September 1st, 2003
Gene Model: June 3rd, 2017
|
| 3 months ago | fcr1 | ferric-chelate reductase (NADH)1: member of a multi-gene family | 3.06 | GRMZM2G133213
| Bagnaresi, P et al. 1999. Biochem J 338:499-505 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 9th, 2008
Gene Model: June 3rd, 2017
|
| 3 months ago | hmt1 | homocysteine S-methyltransferase 1: | | | Ranocha, P et al. 2001. Plant J 25:575-584 | | Reference: September 1st, 2003
Gene Product: July 19th, 2004
Variation: June 3rd, 2017
|
| 3 months ago | ork1 | outward rectifying potassium channel1: | 4.05 | GRMZM2G156255
| Philippar, K, et al. 2003. J Biol Chem. 278:16973-81 | | Reference: July 14th, 2006
Gene Product: February 19th, 2008
Variation: February 19th, 2008
Gene Model: June 3rd, 2017
|
| 3 months ago | orc3 | origin recognition complex3: member of a complex having a role in recognition and binding to origins of DNA replication; evidence from yeast two-hybrid assays and expression profiles | | GRMZM2G381822
| Witmer, X et al. 2003. Putative subunits of the maize origin of replication recognition complex ZmORC1-ZmORC5. Nucl Acid Res 31:619-628 | | Reference: September 1st, 2003
Variation: November 6th, 2010
Gene Model: June 2nd, 2017
Recommended by Marty Sachs:
March 7th, 2007
|
| 3 months ago | tel2 | telomere maintenance2: | | GRMZM2G144166
| Garcia, NS et al. 2017. Proc Natl Acad Sci, USA 114:5165-5170 | | Reference: June 1st, 2017
Gene Product: June 2nd, 2017
Gene Model: June 1st, 2017
|
| 3 months ago | dek38 | defective kernel38: mutants are embryonic lethal, has a defective basal endosperm transfer (BETL) layer, and results in a smaller seed with highly underdeveloped endosperm. | | GRMZM2G048851
| Garcia, NS et al. 2017. Proc Natl Acad Sci, USA 114:5165-5170 | At2g39910 (TAIR) | Reference: June 1st, 2017
Gene Product: June 2nd, 2017
Variation: May 2nd, 2017
Gene Model: May 2nd, 2017
|
| 3 months ago | tti1 | tel2-interacting protein1: | | GRMZM2G056403
| Garcia, NS et al. 2017. Proc Natl Acad Sci, USA 114:5165-5170 | | Reference: June 1st, 2017
Gene Product: June 2nd, 2017
Variation: June 1st, 2017
Gene Model: June 1st, 2017
|
| 3 months ago | eng1 | endo-1,3-1,4-beta-D-glucanase1: coleoptile enzyme, orthologous to rice enzyme; located in cell wall, IAA- stimulated coleoptile growth inhibited by antibody | 4.05 | GRMZM2G073079
| Thomas, B et al. 1998. Plant Physiol 117: 1525 | | Reference: March 16th, 2006
Variation: May 20th, 2009
Gene Model: June 1st, 2017
Recommended by Ed Coe:
January 8th, 2008
|
| 3 months ago | rab30 | responsive to abscisic acid30: cDNA and protein elicited by ABA | 1.01 | GRMZM2G472236
| Burr, B et al. 1991. MNL 65:105-110 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: May 2nd, 2011
Gene Model: June 1st, 2017
|
| 3 months ago | mtl3 | metallothionein3: cDNA highly expressed during microsporogenesis, one (or two) copies, high sequence homology with type 2 metallothionein. | 4.05 | GRMZM2G099340
| Charbonnel-Campaa, L et al. 2000. Gene 254:199-208 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 1st, 2017
|
| 3 months ago | hvp1 | human viral protein homolog1: endosperm cDNA 5C02B04, similar to a virus transcription activator | 9.02 | GRMZM5G852396
| Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 1st, 2017
|
| 3 months ago | sin1 | sin homolog1: endosperm cDNA 5C01E06, similar to yeast SIN3 | | GRMZM2G319104
| Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 1st, 2017
|
| 3 months ago | smk2 | small kernel2: mutants are recessive embryo-lethal small kernel | 4.10 | GRMZM2G023528
| Yang, Y-Z, et al. 2017. Plant Physiol. 0:doi: 10.1104/pp.16.01295 | | Reference: June 1st, 2017
Gene Product: April 14th, 2017
Variation: April 14th, 2017
Gene Model: April 14th, 2017
|
| 3 months ago | ric1 | ras-related protein RIC1: | | GRMZM2G106960
| Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141 | | Reference: January 12th, 2011
Variation: January 12th, 2011
Gene Model: June 1st, 2017
|
| 3 months ago | ara3 | ras-related protein ARA-3: | | GRMZM2G061900
| Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141 | | Reference: January 12th, 2011
Variation: January 17th, 2011
Gene Model: June 1st, 2017
|
| 3 months ago | rgp2 | ras-related protein RGP2: | | GRMZM2G093186
| Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141 | | Reference: January 12th, 2011
Variation: January 17th, 2011
Gene Model: June 1st, 2017
|
| 3 months ago | sqsh1 | squalene synthase homolog1: Designation as sqsh1 based on high homology to sqs1 sequence; existence of several cDNAs indicates a functional gene (EHC Jan 2011) | | GRMZM2G029396
| | | Variation: January 27th, 2011
Gene Model: June 1st, 2017
|
| 3 months ago | cnh1 | carbon-nitrogen hydrolase homolog1: | 9.07 | GRMZM2G169365
| Guo, M; Rupe, M; Danilevskaya, O; Yang, X; Hut, ZH. 2003. Plant J. 36:30-44 | | Reference: November 12th, 2010
Variation: March 24th, 2011
Gene Model: June 1st, 2017
|
| 3 months ago | psei5 | cystatin5: | 6.05 | GRMZM2G024264
| Massonneau, A; Condamine, P; Wisniewski, J; Zivy, M; Rogowsky, P. 2005. Biochim Biophys Acta. 1729:186-199 | | Reference: February 20th, 2009
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: June 1st, 2017
|
| 3 months ago | psei10 | cystatin10: | 8.06 | GRMZM2G030717
| Massonneau, A; Condamine, P; Wisniewski, J; Zivy, M; Rogowsky, P. 2005. Biochim Biophys Acta. 1729:186-199 | | Reference: February 20th, 2009
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: June 1st, 2017
|
| 3 months ago | rpl44 | ribosomal protein L44: vegetative meristem cDNA 7C02A07 | 7.03 | GRMZM2G009412
| Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: January 24th, 2009
Gene Model: June 1st, 2017
|
| 3 months ago | bk2 | brittle stalk2: brittle plant parts after 4-leaf stage | 9.04 - 9.05 | GRMZM2G109326
| Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763 | | Reference: May 31st, 2017
Gene Product: March 6th, 2012
Variation: March 6th, 2012
Gene Model: March 5th, 2012
|
| 3 months ago | bt2 | brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC | 4.05 | | Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763 | | Reference: May 31st, 2017
Gene Product: November 4th, 2014
Variation: November 12th, 2013
|
| 3 months ago | sh2 | shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period | 3.09 | | Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763 | | Reference: May 31st, 2017
Gene Product: November 4th, 2014
Variation: October 10th, 2014
|
| 3 months ago | wx1 | waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic | 9.03 | | Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763 | | Reference: May 31st, 2017
Gene Product: June 4th, 2008
Variation: March 4th, 2017
|
| 3 months ago | mrp1 | Myb related protein1: transforms aleurone cells into endosperm transfer cells and required to maintain transfer cell phenotype | 8.05 | | Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763 | | Reference: May 31st, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
|
| 3 months ago | sweet4c | sugars will eventually be exported transporter4c: Mutants are defective in seed filling | 5.04 | GRMZM2G137954
| Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763 | LOC_Os02g19820 (MSU/TIGR) | Reference: May 31st, 2017
Gene Product: November 4th, 2015
Variation: November 3rd, 2015
Gene Model: November 3rd, 2015
|
| 3 months ago | ubr1 | ubiquitin receptor1: Orthologous to Arabidopsis DA1 | | GRMZM2G017845
| Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763 | | Reference: May 31st, 2017
Gene Product: October 11th, 2012
Variation: October 11th, 2012
Gene Model: October 10th, 2012
|
| 3 months ago | limtf4 | LIM-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.05 | GRMZM2G099328
| Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763 | AT4G36860 (TAIR) | Reference: May 31st, 2017
Gene Product: May 31st, 2017
Variation: May 31st, 2017
Gene Model: May 31st, 2017
|
| 3 months ago | AY103944 | : similar to Arabidopsis poly(A) binding protein 8 | 2.04 | GRMZM2G352129
| | | Variation: September 25th, 2007
Gene Model: May 30th, 2017
|
| 3 months ago | AI714808 | : similar to Arabidopsis protein phosphatase methylesterase 1 | 2.04 | GRMZM2G005346
| | | Variation: July 29th, 2004
Gene Model: May 30th, 2017
|
| 3 months ago | AW036917 | : | 6.05 | GRMZM2G106218
| | | Variation: July 29th, 2004
Gene Model: May 30th, 2017
|
| 3 months ago | ereb94 | AP2-EREBP-transcription factor 94: strongly expressed in the maize endosperm; might act as a key regulator of starch synthesis in maize (Li et al., 2017) | | | Li, H et al. 2017. J Plant Physiol 216:11-16 | | Reference: May 29th, 2017
Variation: May 9th, 2017
|
| 3 months ago | mab27 | math-btb27: | | GRMZM2G161569
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 28th, 2017
Gene Model: February 14th, 2017
|
| 3 months ago | rap2 | rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007) | 8.06 | GRMZM2G700665
| Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480 | | Reference: May 27th, 2017
Gene Product: February 27th, 2017
Gene Model: November 20th, 2012
|
| 3 months ago | pebp8 | phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011) | | GRMZM2G179264
| Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480 | | Reference: May 27th, 2017
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
|
| 3 months ago | d8 | dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins. | 1.09 | GRMZM2G144744
| Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480 | | Reference: May 27th, 2017
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
|
| 3 months ago | zfl1 | zea floricaula/leafy1: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition. | 10.06 | | Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480 | | Reference: May 27th, 2017
Variation: February 20th, 2007
|
| 3 months ago | zfl2 | Zea floricaula leafy2: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition. | 2.02 | | Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480 | | Reference: May 27th, 2017
Variation: October 9th, 2014
|
| 3 months ago | dlf1 | delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length | | | Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480 | | Reference: May 27th, 2017
Variation: February 6th, 2011
|
| 3 months ago | mads1 | MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages | 9.07 | | Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480 | | Reference: May 27th, 2017
Gene Product: September 1st, 2003
Variation: April 15th, 2008
|
| 3 months ago | cca1 | circadian clock associated1: myb transcription factor - clock gene | | GRMZM2G014902
| Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480 | | Reference: May 27th, 2017
Gene Product: July 31st, 2016
Variation: March 18th, 2011
Gene Model: July 30th, 2016
|
| 3 months ago | mab20 | math-btb20: | | GRMZM2G009724
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 26th, 2017
Gene Model: February 14th, 2017
|
| 3 months ago | cki4 | cyclin-dependent kinase inhibitor4: | | GRMZM2G358931
| Xiao, QL et al. 2017. Sci. Rep. 7:43818 | | Reference: March 7th, 2017
Gene Product: March 8th, 2017
Variation: May 26th, 2017
Gene Model: March 7th, 2017
|
| 3 months ago | mab1 | math-btb1: | | AC195147.3_FG001
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 24th, 2017
Gene Model: February 13th, 2017
|
| 3 months ago | mab15 | math-btb15: | | GRMZM2G148213
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 24th, 2017
Gene Model: February 13th, 2017
|
| 4 months ago | sca1 | short chain alcohol dehydrogenase1: single copy leaf cDNA, csu149, similar to ts2 | 5.00 | GRMZM2G332976
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: September 1st, 2003
Variation: July 27th, 2013
Gene Model: June 23rd, 2015
|
| 4 months ago | ao3 | aldehyde oxidase3: associated with ABA levels in silks of water-stressed plants (Setter et al 2011) | 1.11 | GRMZM2G019799
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: February 5th, 2013
Gene Model: February 5th, 2013
|
| 4 months ago | zep1 | zeaxanthin epoxidase1: | 2.04 | GRMZM2G127139
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
|
| 4 months ago | lyce1 | lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids | 8.05 | GRMZM2G012966
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Variation: October 3rd, 2011
Gene Model: October 3rd, 2011
|
| 4 months ago | lw1 | lemon white1: white seedling, pale yellow endosperm; some alleles have zebra or luteus phenotypes | 1.10 | GRMZM2G027059
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: June 20th, 2012
Variation: March 10th, 2016
Gene Model: January 8th, 2014
|
| 4 months ago | ps1 | pink scutellum1: (aka vp7, lyc1, lycB) some alleles viviparous; endosperm and scutellum pink, seedling white with pink flush | 5.04 - 5.04 | | Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Variation: March 30th, 2011
|
| 4 months ago | vp5 | viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070 | 1.02 - 1.02 | | Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 13th, 2011
Variation: March 4th, 2014
|
| 4 months ago | vp9 | viviparous9: (was y7, z1, zds1) like vp2; vp9-4889 dormant, pale aleurone, pale green seedling | 7.02 | GRMZM2G454952
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 13th, 2011
Variation: March 25th, 2017
Gene Model: March 8th, 2013
|
| 4 months ago | aox1 | alternative oxidase1: primers give PCR product closely similar to alternative oxidase in other species | 2.02 | AC233960.1_FG002
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: February 22nd, 2012
Variation: February 22nd, 2012
Gene Model: February 17th, 2012
|
| 4 months ago | cmk1 | cytidine methyl kinase1: encodes 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [a.k.a. 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase] | 3.06 | GRMZM5G859195
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: October 9th, 2014
Gene Model: October 4th, 2014
|
| 4 months ago | nced3 | nine-cis-epoxycarotenoid dioxygenase3: | | GRMZM5G858784
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Gene Model: September 20th, 2012
|
| 4 months ago | nced5 | nine-cis-epoxycarotenoid dioxygenase5: | | GRMZM2G417954
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Variation: September 1st, 2011
Gene Model: September 20th, 2012
|
| 4 months ago | dxs3 | deoxy xylulose synthase3: | | GRMZM2G173641
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: August 17th, 2004
Variation: February 15th, 2012
Gene Model: December 9th, 2011
|
| 4 months ago | hds1 | hydroxymethylbutenyl diphosphate synthase1: | | GRMZM2G137409
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: December 10th, 2011
|
| 4 months ago | aox2 | alternative oxidase2: primers give PCR product closely similar to alternative oxidase in other species | | GRMZM2G125669
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: February 22nd, 2012
Variation: March 1st, 2012
Gene Model: February 17th, 2012
|
| 4 months ago | ccd8 | carotenoid cleavage dioxygenase8: Mutants have mild branching, short stature, small ear size, and narrow-stalk | | GRMZM2G446858
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Variation: September 21st, 2012
Gene Model: September 20th, 2012
|
| 4 months ago | crti1 | carotene isomerase1: enclodes carotene isomerase1 | | GRMZM2G108457
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
|
| 4 months ago | crti2 | carotene isomerase2: encodes carotene isomerase2 | | GRMZM2G106531
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
|
| 4 months ago | ggps1 | geranylgeranyl pyrophosphate synthase1: part of multigene family encoding geranylgeranyl diphosphate synthase | | AC194970.5_FG001
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
|
| 4 months ago | ggps2 | geranylgeranyl pyrophosphate synthase2: part of multigene family encoding geranylgeranyl diphosphate synthase | | GRMZM2G102550
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
|
| 4 months ago | ggps3 | geranylgeranyl pyrophosphate synthase3: part of multigene family encoding geranylgeranyl diphosphate synthase | | GRMZM2G102550
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
|
| 4 months ago | ippi1 | isopentenyl pyrophosphate isomerase1: part of multigene family encoding isopentenyl pyrophosphate isomerase | | GRMZM2G108285
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
|
| 4 months ago | ippi2 | isopentenyl pyrophosphate isomerase2: part of multigene family encoding isopentenyl pyrophosphate isomerase | | GRMZM2G145029
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
|
| 4 months ago | ggps4 | geranylgeranyl pyrophosphate synthase4: part of multigene family encoding geranylgeranyl diphosphate synthase | | GRMZM2G005909
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
|
| 4 months ago | cyp14 | cytochrome P450 14: encodes CYP97C | | GRMZM5G837869
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: June 3rd, 2015
Variation: June 3rd, 2015
Gene Model: April 8th, 2013
|
| 4 months ago | vde1 | violaxanthin de-epoxidase1: Encodes violaxanthin de-epoxidase. Based on sequence similarity to Arabiodopsis gene. | | GRMZM2G027219
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 13th, 2011
Gene Model: April 9th, 2013
|
| 4 months ago | crti3 | carotene isomerase3: enclodes carotene isomerase | | GRMZM2G144273
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: September 29th, 2014
|
| 4 months ago | nced2 | nine-cis-epoxycarotenoid dioxygenase2: | | GRMZM2G407181
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
|
| 4 months ago | nced6 | nine-cis-epoxycarotenoid dioxygenase6: | | GRMZM2G110192
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
|
| 4 months ago | nced8 | nine-cis-epoxycarotenoid dioxygenase8: | | GRMZM2G150363
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
|
| 4 months ago | nced9 | nine-cis-epoxycarotenoid dioxygenase9: | | GRMZM5G838285
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
|
| 4 months ago | ccd7 | carotenoid cleavage dioxygenase7: | | GRMZM2G158657
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | AT2G44990 (TAIR) | Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
|
| 4 months ago | mecs1 | methyl erythritol cyclodiphosphate synthase1: | | GRMZM5G835542
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
|
| 4 months ago | mecs2 | methyl erythritol cyclodiphosphate synthase2: | | AC209374.4_FG002
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
|
| 4 months ago | mab24 | math-btb24: | | GRMZM2G103251
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 23rd, 2017
Gene Model: February 14th, 2017
|
| 4 months ago | mab25 | math-btb25: | | GRMZM2G088086
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 23rd, 2017
Gene Model: February 14th, 2017
|
| 4 months ago | mab26 | math-btb26: | | GRMZM2G161610
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 23rd, 2017
Gene Model: February 14th, 2017
|
| 4 months ago | dxs1 | deoxy xylulose synthase 1: leaf specific; function inferred from Medicago trunculata gene sequence and expression pattern (Walter 2002) | 6.05 | GRMZM2G137151
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: August 17th, 2004
Variation: June 20th, 2012
Gene Model: December 9th, 2011
|
| 4 months ago | dxs2 | deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes | 9.03 | GRMZM2G493395
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: August 17th, 2004
Variation: February 15th, 2012
Gene Model: December 9th, 2011
|
| 4 months ago | dxr1 | deoxy xylulose reductoisomerase1: enzyme catalyzes the first committed step of the plastidial pathway to apocarotenoids during mycorrhizal establishment | 3.04 | GRMZM2G056975
| Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851 | | Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Variation: May 11th, 2005
Gene Model: December 9th, 2011
|
| 4 months ago | ptac14 | plastid transcriptionally active14: Ortholog of Arabidopsis PTAC14. Associates with Plastid Encoded RNA polymerase (PEP). Required for PEP-mediated transcription. (A. Barkan, 2015)ortholog of Arabidopsis PTAC14, a PEP-associated protein, required for PEP-mediated transcription; cpRNA defects in maize similar to other PEP-deficient mutants | | GRMZM5G807767
| Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016 | | Reference: December 1st, 2015
Variation: May 21st, 2017
Gene Model: February 17th, 2015
|
| 4 months ago | ppr102 | pentatricopeptide repeat102: | | GRMZM2G012174
| | At5g50280 (TAIR)
LOC_Os05g22870 (MSU/TIGR) | Gene Product: December 27th, 2016
Gene Model: May 21st, 2017
|
| 4 months ago | znfn1 | zinc finger protein1: | | GRMZM2G086277
| | At5g52010 (TAIR)
LOC_Os06g07020 (MSU/TIGR) | Gene Product: April 4th, 2017
Gene Model: May 21st, 2017
|
| 4 months ago | ppr36 | pentatricopeptide repeat36: | | GRMZM2G333678
| | AT4G19191 (TAIR)
LOC_Os11g14980 (MSU/TIGR) | Gene Product: December 27th, 2016
Gene Model: May 21st, 2017
|
| 4 months ago | ppr61 | pentatricopeptide repeat61: | | GRMZM2G341479
| | AT1G09220 (TAIR)
LOC_Os02g49830 (MSU/TIGR) | Gene Product: December 27th, 2016
Gene Model: May 21st, 2017
|
| 4 months ago | psa2 | photosystemI2: thylakoid lumen protein with protein disulfided isomerase activity; mutants lack photosystem I core complex polypeptidesDnaJ-type zinc finger domain protein found in thylakoid lumen. Required for Photosystem I assembly. (A. Barkan, 2015) | | GRMZM2G021687
| Shen, J et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.00524 | | Reference: May 20th, 2017
Gene Product: September 1st, 2003
Variation: September 18th, 2014
Gene Model: September 18th, 2014
|
| 4 months ago | psa3 | photosystemI3: Mutants have a pale green seedling phenotype; lacks photosystem I core complex polypeptides | | GRMZM2G051403
| Shen, J et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.00524 | AT3G55250 (TAIR) | Reference: May 20th, 2017
Gene Product: May 20th, 2017
Variation: May 20th, 2017
Gene Model: May 20th, 2017
|
| 4 months ago | hcf148 | high chlorophyll fluorescence148: Ortholog of Arabidopsis Y3IP1. PSI assembly factor, cooperates with Ycf3. (A. Barkan, 2015)mutants lack photosystem I, pale green seedling lethal; the Arabidopsis ortholog, Y3IP1, is a PSI assembly factor and cooperates with Ycf3 | 3.06 | GRMZM2G002165
| Shen, J et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.00524 | | Reference: May 20th, 2017
Variation: December 30th, 2015
Gene Model: February 17th, 2015
|
| 4 months ago | pyg7 | pale yellowgreen7: mutants are pale yellow green; encodes an assembly factor that interacts with PSA3 | | GRMZM5G809292
| Shen, J et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.00524 | AT1G22700 (TAIR) | Reference: May 20th, 2017
Gene Product: May 20th, 2017
Variation: May 20th, 2017
Gene Model: May 20th, 2017
|
| 4 months ago | ppr6 | pentatricopeptide repeat6: | | GRMZM2G093291
| | At5g27270 (TAIR)
LOC_Os06g02120 (MSU/TIGR) | Gene Product: December 27th, 2016
Gene Model: May 20th, 2017
|
| 4 months ago | ppr13 | pentatricopeptide repeat13: | | GRMZM2G099604
| | At2g02980 (TAIR)
LOC_Os03g58100 (MSU/TIGR) | Gene Product: December 27th, 2016
Gene Model: May 20th, 2017
|
| 4 months ago | ppr100 | pentatricopeptide repeat100: | | GRMZM2G428579
| | At2g01860 (TAIR)
LOC_Os02g02590 (MSU/TIGR) | Gene Product: December 27th, 2016
Gene Model: May 20th, 2017
|
| 4 months ago | ak2 | ankyrin repeat protein2: | 4.10 | GRMZM2G019838
| | At5g40160 (TAIR)
LOC_Os06g13000 (MSU/TIGR) | Variation: September 25th, 2007
Gene Model: May 20th, 2017
|
| 4 months ago | mab17 | math-btb17: | | GRMZM2G166049
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 17th, 2017
Gene Model: February 14th, 2017
|
| 4 months ago | cki2 | cyclin-dependent kinase inhibitor2: | | GRMZM2G037926
| Xiao, QL et al. 2017. Sci. Rep. 7:43818 | | Reference: March 7th, 2017
Gene Product: March 8th, 2017
Variation: May 17th, 2017
Gene Model: March 7th, 2017
|
| 4 months ago | umc1509 | : NCBI: similar to Arabidopsis PATATIN-like protein 5 | 4.02 | GRMZM2G154523
| | | Variation: May 16th, 2017
Gene Model: May 16th, 2017
|
| 4 months ago | stk3 | serine-threonine kinase3: pollen-specific expression | | GRMZM2G301647
| Wang, H et al. 2017. Genome pp.doi: 10.1139/gen-2016-0089 | | Reference: January 9th, 2017
Gene Product: May 13th, 2014
Variation: May 16th, 2017
Gene Model: January 9th, 2017
|
| 4 months ago | chlh1 | Mg chelatase subunit H 1: | | GRMZM2G323024
| Zoschke, R; Chotewutmontri, P; Barkan, A. 2017. Adv Frontiers Plant Sci. 8:385 | AT5G13630 (TAIR)
LOC_Os03g20700 (MSU/TIGR) | Reference: May 15th, 2017
Gene Product: June 11th, 2007
Gene Model: May 15th, 2017
|
| 4 months ago | rpl16 (cp) | 50S ribosomal protein L16 gene: | | | Hammani, K et al. 2016. Nucl Acid Res 44:4278-4288 | | Reference: May 15th, 2017
Gene Product: September 1st, 2003
|
| 4 months ago | ppr103 | pentatricopeptide repeat-containing protein103: required for the accumulation of plastid ribosomes | | GRMZM2G170896
| Hammani, K et al. 2016. Nucl Acid Res 44:4278-4288 | AT5G03800 (TAIR) | Reference: May 15th, 2017
Gene Product: December 27th, 2016
Variation: April 21st, 2016
Gene Model: April 21st, 2016
|
| 4 months ago | pin15 | PIN-formed protein15: similar to rice OsPIN1b and OsPIN1d | | GRMZM2G403601
| Li, ZX et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12751 | LOC_Os11g04190 (MSU/TIGR) | Reference: May 13th, 2017
Gene Product: April 21st, 2014
Gene Model: May 13th, 2017
|
| 4 months ago | dmc1 | disrupted meiotic cDNA homolog1: | | GRMZM2G109618
| Sidhu, GK et al. 2017. BMC Genomics 18:106 | | Reference: January 27th, 2017
Variation: May 12th, 2017
Gene Model: January 27th, 2017
|
| 4 months ago | mab4 | math-btb4: | | GRMZM2G081441
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 12th, 2017
Gene Model: February 13th, 2017
|
| 4 months ago | pza03527 | : | 3.03 | | | | Variation: May 11th, 2017
|
| 4 months ago | dbb1 | double B-box zinc finger protein1: | 2.04 | GRMZM2G018876
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | mre11a | meiotic recombination protein 11 homolog A: | | GRMZM2G106056
| Sidhu, GK et al. 2017. BMC Genomics 18:106 | | Reference: January 27th, 2017
Variation: May 10th, 2017
Gene Model: January 27th, 2017
|
| 4 months ago | mab10 | math-btb10: | | GRMZM2G154437
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 10th, 2017
Gene Model: February 13th, 2017
|
| 4 months ago | mab14 | math-btb14: | | GRMZM2G052985
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 10th, 2017
Gene Model: February 13th, 2017
|
| 4 months ago | mab16 | math-btb16: | | GRMZM2G172210
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 10th, 2017
Gene Model: February 14th, 2017
|
| 4 months ago | dbb2 | double B-box zinc finger protein2: | | GRMZM2G131982
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | dbb3 | double B-box zinc finger protein3: similar to Arabidopsis light-regulated zinc finger protein 1 | | GRMZM5G834596
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | dbb5 | double B-box zinc finger protein5: | | GRMZM2G118884
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | dbb7 | double B-box zinc finger protein7: | | GRMZM2G110541
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | dbb8 | double B-box zinc finger protein8: | | GRMZM2G070446
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | dbb9 | double B-box zinc finger protein9: | | GRMZM2G116475
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | dbb10 | double B-box zinc finger protein10: | | GRMZM2G143718
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | dbb11 | double B-box zinc finger protein11: | | GRMZM2G028594
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | dbb12 | double B-box zinc finger protein12: | | GRMZM2G098442
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | dbb6 | double B-box zinc finger protein6: | 5.05 | GRMZM2G095299
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | dbb4 | double B-box zinc finger protein4: | 4.05 | GRMZM2G019335
| Li, W-L et al. 2017. Funct Integr Genomics pp.doi: 10.1007/s10142-017-0562-z | | Reference: May 10th, 2017
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
|
| 4 months ago | gcs1 | generative cell specific1: | | GRMZM2G412911
| Moiseeva, YM et al. 2017. Russian Journal of Developmental Biology. 48:117-121 | AT4G11720 (TAIR)
LOC_Os05g18730 (MSU/TIGR) | Reference: April 10th, 2017
Variation: May 9th, 2017
Gene Model: April 10th, 2017
|
| 4 months ago | dof21 | C2C2-Dof-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.02 | GRMZM2G162749
| Peng, J et al. 2017. Frontiers Plant Sci 8:685 | | Reference: May 6th, 2017
Variation: January 6th, 2017
Gene Model: January 6th, 2017
|
| 4 months ago | cncr1 | cinnamoyl CoA reductase1: Mutant results in plants with improved cell wall digestibility | 1.07 | GRMZM2G131205
| Smith, RA et al. 2017. Biotechnol Biofuels. 10:109 | | Reference: May 5th, 2017
Gene Product: September 1st, 2003
Variation: May 5th, 2017
Gene Model: June 23rd, 2016
|
| 4 months ago | mab7 | math-btb7: | | GRMZM2G110531
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 4th, 2017
Gene Model: February 13th, 2017
|
| 4 months ago | mab18 | math-btb18: | | GRMZM2G060765
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 4th, 2017
Gene Model: February 14th, 2017
|
| 4 months ago | mab30 | math-btb30: | | GRMZM2G319215
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 4th, 2017
Gene Model: February 14th, 2017
|
| 4 months ago | cki3 | cyclin-dependent kinase inhibitor3: | | GRMZM2G157510
| Xiao, QL et al. 2017. Sci. Rep. 7:43818 | | Reference: March 7th, 2017
Gene Product: March 8th, 2017
Variation: May 4th, 2017
Gene Model: March 7th, 2017
|
| 4 months ago | mac1 | multiple archesporial cells1: (was lar*-487) several archesporial cells undergo normal meiosis; plants partially female sterile but completely male sterileBeware: this locus could accidentally be confused with the act1 (actin 1) locus, which also was called MAc1 in past publications! | 10.03 | GRMZM2G027522
| Wang, C-J, et al. 2012. Development. 139:2594-2603 | | Reference: May 2nd, 2017
Gene Product: August 2nd, 2012
Variation: August 10th, 2012
Gene Model: July 26th, 2012
Recommended by Chung-Ju Rachel Wang:
December 19th, 2013
|
| 4 months ago | sm1 | salmon silks1: silks salmon color with P1-rr and P1-wr, brown with P1-ww | 6.05 - 6.05 | GRMZM2G031311
| Casas, MI et al. 2016. Plant Cell 28:1297-1309 | | Reference: May 1st, 2017
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
|
| 4 months ago | sm2 | salmon silk2: like sm1; silks salmon color with P1-rr and P1-wr, brown with P1-ww | 2.07 | GRMZM2G180283
| Casas, MI et al. 2016. Plant Cell 28:1297-1309 | | Reference: May 1st, 2017
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
|
| 4 months ago | prh17 | protein phosphatase homolog17: responds to Pi starvation | | GRMZM2G164352
| Wang, J et al. 2017. PLoS One 12:e0176538 | | Reference: April 28th, 2017
Gene Product: September 1st, 2003
Variation: April 28th, 2017
Gene Model: April 28th, 2017
|
| 4 months ago | rca1 | RUBISCO activase1: single copy leaf cDNA csu901 smilar to RUBISCO activaseencodes the beta form of RUBISCO activase | 4.00 | GRMZM2G162282
| Bouchet, S et al. 2017. Heredity 118:249-259 | | Reference: April 27th, 2017
Gene Product: October 28th, 2014
Variation: September 1st, 2003
Gene Model: February 11th, 2014
|
| 4 months ago | kn1 | knotted1: dominant Kn1 plants have localized proliferation of tissue at vascular bundles on leaf | 1.10 | | Bouchet, S et al. 2017. Heredity 118:249-259 | | Reference: April 27th, 2017
Variation: December 6th, 2013
|
| 4 months ago | nip1a | NOD26-like membrane intrinsic protein1: leaf cDNA csu177 similar to rice nodulin | 5.04 | GRMZM2G041980
| Bouchet, S et al. 2017. Heredity 118:249-259 | | Reference: April 27th, 2017
Gene Product: September 1st, 2003
Variation: June 2nd, 2015
Gene Model: June 2nd, 2015
|
| 4 months ago | nod1 | narrow odd dwarf1: mutants are small plants with narrow leaves | | GRMZM2G027821
| Rosa, M et al. 2017. Plant Cell 29:474-490 | AT4G35920 (TAIR)
LOC_Os03g06120 (MSU/TIGR) | Reference: April 27th, 2017
Gene Product: March 4th, 2017
Variation: March 4th, 2017
Gene Model: March 4th, 2017
|
| 4 months ago | bz1 | bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase | 9.02 | | Pan, QC et al. 2017. Sci. Rep. 7:1205 | | Reference: April 26th, 2017
Gene Product: September 1st, 2003
Variation: June 25th, 2015
|
| 4 months ago | sh1 | shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033 | 9.01 | | Pan, QC et al. 2017. Sci. Rep. 7:1205 | | Reference: April 26th, 2017
Gene Product: October 25th, 2006
Variation: October 13th, 2014
|
| 4 months ago | bnl10.13a | : NCBI: probable serine/threonine-protein kinase PIX13 | 10.05 | GRMZM2G142832
| Matz, EC et al. 1992. MNL 66:107 | | Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 25th, 2017
|
| 4 months ago | hb91 | Homeobox-transcription factor 91: Tests with B-A translocations indicated that this probe did not map to chromosomes 4L or 6L.NCBI: Homeodomain leucine zipper family IV proteinLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 10.07 | GRMZM2G122897
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: September 1st, 2003
Variation: April 25th, 2017
Gene Model: April 25th, 2017
|
| 4 months ago | npi285a(cac) | : | 10.02 | GRMZM2G350841
| Hulbert, SH and Bennetzen, JL. 1991. Mol Gen Genet 226:377-382 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 25th, 2017
|
| 4 months ago | umc130 | : | 10.03 | GRMZM2G125931
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Variation: April 25th, 2017
Gene Model: April 25th, 2017
|
| 4 months ago | umc259a | : | 10.05 | AC233888.1_FG001
| | | Variation: April 25th, 2017
Gene Model: April 25th, 2017
|
| 5 months ago | tps23 | terpene synthase23: part of defense response to herbivory by western maize rootworm and Spodoptera littoralis but not expressed highly in most North American maize | 10.03 | GRMZM2G127336
| Tamiru, A et al. 2017. Ecology and Evolution. 7:2835-2845 | | Reference: April 22nd, 2017
Gene Product: July 21st, 2008
Variation: March 21st, 2017
Gene Model: August 22nd, 2012
|
| 5 months ago | umc95 | : NCBI: Putative calmodulin-binding family protein | 9.05 | GRMZM5G880028
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Variation: April 21st, 2017
Gene Model: April 21st, 2017
|
| 5 months ago | nta1 | N-terminal amidase1: NCBI: CemA-like proton extrusion protein-related | 9.08 | GRMZM2G110258
| Anderson, L, et al. 2004. Genetics. 166:1923-1933 | At4g34090 (TAIR)
LOC_Os03g01920 (MSU/TIGR) | Reference: February 12th, 2011
Variation: April 21st, 2017
Gene Model: April 21st, 2017
|
| 5 months ago | asg12a | : genomic clone, single copyNCBI: putative glycosyl hydrolase family 10 protein | 9.07 | GRMZM2G048375
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Variation: April 21st, 2017
Gene Model: April 21st, 2017
|
| 5 months ago | csu634 | : protein phosphatase 2C-like (Alexandrov et al.) | 9.05 | GRMZM2G006429
| | | Variation: April 20th, 2017
Gene Model: April 20th, 2017
|
| 5 months ago | npi414a | : similar to Arabidopsis NADH dehydrogenase | 8.08 | GRMZM2G069260
| Grant, D and Helentjaris, T. 1995. RFLP probe sequence submission to dbSTS | | Reference: September 1st, 2003
Variation: April 19th, 2017
Gene Model: April 19th, 2017
|
| 5 months ago | csu31a | : partially sequenced cDNA to leaf mRNANCBI: Tat pathway signal sequence | 8.06 | GRMZM2G154508
| Heredia-Diaz, O et al. 1994. MNL 68:30-34 | | Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 19th, 2017
|
| 5 months ago | agrr21 | : NCBI: protein CURVATURE THYLAKOID 1C, chloroplastic | 8.09 | GRMZM2G302639
| Armstrong, CL et al. 1992. Theor Appl Genet 84:755-762 | | Reference: September 1st, 2003
Variation: September 25th, 2007
Gene Model: April 19th, 2017
|
| 5 months ago | si606065d12 | : | 1.03 | GRMZM2G149481
| | | Gene Product: April 19th, 2017
Gene Model: April 19th, 2017
|
| 5 months ago | atl1 | auxin transporter-like1: mutant tassels have reduced branch numbers; bald tip on ears with fewer spikelets per row, and agravitropic root growth | | GRMZM2G128918
| Huang, P et al. 2017. Nature Plants 3:17054 | AT2G38120 (TAIR)
LOC_Os01g63770 (MSU/TIGR) | Reference: April 19th, 2017
Gene Product: April 19th, 2017
Variation: April 19th, 2017
Gene Model: March 12th, 2015
|
| 5 months ago | rip1 | ribosome-inactivating protein1: electrophoretic mobility, seed-specific, abundant 32kD endosperm protein (b32 protein), cytosolic, inactivates rabbit (not maize or wheat) ribosomes; cDNA ZmRIP3, SSR phi014, phi060, umc1202 | 8.03 | GRMZM2G063536
| Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: April 19th, 2005
Gene Model: April 18th, 2017
|
| 5 months ago | csu454(gst) | : | 1.01 | GRMZM2G096247
| | | Gene Product: September 1st, 2003
Variation: August 9th, 2010
Gene Model: April 18th, 2017
|
| 5 months ago | umc1149 | : NCBI: Glutathione S-transferase family | 8.06 | GRMZM2G105005
| | | Gene Product: September 1st, 2003
Variation: April 18th, 2017
Gene Model: April 18th, 2017
|
| 5 months ago | rop7 | Rho-related protein from plants 7: cDNA, plasma membrane targeting, SSR umc1950In Maize Genetics Conference Abstracts rop7 was called rop1. These abstracts are indeed discussing rop7. | 8.05 | AC209819.3_FG012
| Christensen, T, et al. 2003. Plant Physiol. 133:1791-1808 | | Reference: March 26th, 2004
Gene Product: April 1st, 2004
Variation: April 18th, 2017
Gene Model: January 1st, 2015
|
| 5 months ago | gst9 | glutathione transferase9: | 9.07 | GRMZM2G126763
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: April 18th, 2017
|
| 5 months ago | gst15 | glutathione transferase15: | 8.05 | GRMZM2G150474
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 17th, 2010
Gene Model: April 18th, 2017
|
| 5 months ago | gst17 | glutathione transferase17: | 5.05 | GRMZM2G064255
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 17th, 2010
Gene Model: April 18th, 2017
|
| 5 months ago | gst21 | glutathione transferase21: | 3.05 | GRMZM2G428168
| McGonigle, B et al. 2000. Plant Physiol 124:1105-1120 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 18th, 2010
Gene Model: April 18th, 2017
|
| 5 months ago | gst22 | glutathione transferase22: | 10.04 | GRMZM2G330635
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 18th, 2010
Gene Model: April 18th, 2017
|
| 5 months ago | gst26 | glutathione transferase26: | 4.05 | GRMZM2G363540
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: April 18th, 2017
|
| 5 months ago | gst34 | glutathione transferase34: | | GRMZM2G149182
| McGonigle, B et al. 2000. Plant Physiol 124:1105-1120 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: April 18th, 2017
|
| 5 months ago | umc1457 | : NCBI: universal stress protein family | 8.03 | GRMZM5G887068
| | | Variation: April 14th, 2017
Gene Model: April 14th, 2017
|
| 5 months ago | sut1 | sucrose transporter1: mutant plants are deficient in leaf sucrose unloading to pholem; mature leaves hyperaccumulate carbohydrates and display leaf chlorosis with premature senescence | 1.02 | GRMZM2G034302
| Braun, DM; Slewinski, TL. 2009. Plant Physiol 149:71-81 | | Reference: April 14th, 2017
Gene Product: September 14th, 2013
Variation: April 16th, 2013
Gene Model: April 16th, 2013
|
| 5 months ago | umc124a(chk) | : "NCBI: choline/ethanolamine kinase; putative choline kinase 2" | 8.03 | GRMZM2G087146
| Senior, ML et al. 1996. MNL 70:50-54 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: April 14th, 2017
Gene Model: April 14th, 2017
|
| 5 months ago | sxd1 | sucrose export defective1: vitamin E synthesis; anthocyanin accumulates in a non-clonal pattern at tip and margins of leaves soon after emergence from whorl; reduced plant height | 5.04 | | Braun, DM; Slewinski, TL. 2009. Plant Physiol 149:71-81 | | Reference: April 14th, 2017
Gene Product: December 1st, 2012
Variation: August 7th, 2012
|
| 5 months ago | kch6 | potassium channel6: | 8.03 | AC234152.1_FG002
| Philippar, K et al. 1999. Proc Natl Acad Sci, USA 96:12186-12191 | | Reference: October 20th, 2008
Gene Product: February 20th, 2008
Variation: April 14th, 2017
Gene Model: April 14th, 2017
|
| 5 months ago | sut3 | sucrose transporter3: | 1.08 | GRMZM2G083248
| Braun, DM; Slewinski, TL. 2009. Plant Physiol 149:71-81 | | Reference: April 14th, 2017
Gene Product: September 14th, 2013
Variation: April 13th, 2017
Gene Model: November 3rd, 2015
|
| 5 months ago | tdy1 | tie-dyed1: Leaf blades develop variegated chlorotic and green regions; chlorotic regions hyperaccumulate carbohydrates.(Braun 2008) | 6.07 | GRMZM2G321778
| Braun, DM; Slewinski, TL. 2009. Plant Physiol 149:71-81 | | Reference: April 14th, 2017
Variation: September 14th, 2011
Gene Model: July 14th, 2011
|
| 5 months ago | tdy2 | tie-dyed2: leaves yellow in patches simulating tie-dyed or zebra patterns | | GRMZM5G840560
| Braun, DM; Slewinski, TL. 2009. Plant Physiol 149:71-81 | | Reference: April 14th, 2017
Gene Product: September 5th, 2012
Variation: September 4th, 2012
Gene Model: September 4th, 2012
|
| 5 months ago | sut4 | sucrose transporter4: | 5.09 | GRMZM2G145107
| Braun, DM; Slewinski, TL. 2009. Plant Physiol 149:71-81 | | Reference: April 14th, 2017
Gene Product: September 14th, 2013
Variation: February 17th, 2017
Gene Model: April 17th, 2013
|
| 5 months ago | sut2 | sucrose transporter2: mutants grow slower and have increased sugar content in leaves | 3.04 | GRMZM2G307561
| Braun, DM; Slewinski, TL. 2009. Plant Physiol 149:71-81 | | Reference: April 14th, 2017
Gene Product: September 14th, 2013
Variation: February 20th, 2017
Gene Model: April 17th, 2013
|
| 5 months ago | sut5 | sucrose transporter5: | | GRMZM2G081589
| Braun, DM; Slewinski, TL. 2009. Plant Physiol 149:71-81 | | Reference: April 14th, 2017
Gene Product: September 14th, 2013
Variation: April 13th, 2017
Gene Model: November 3rd, 2015
|
| 5 months ago | sut6 | sucrose transporter6: | | GRMZM2G106741
| Braun, DM; Slewinski, TL. 2009. Plant Physiol 149:71-81 | | Reference: April 14th, 2017
Gene Product: September 14th, 2013
Variation: April 13th, 2017
Gene Model: November 3rd, 2015
|
| 5 months ago | sut7 | sucrose transporter7: single copy cDNA; transcripts observed in mature leaf blades of young plants, and at reproductive stage in various tissues including leaf sheaths, culms, husks, pedicels, with little transcript detected in silks and developing kernels. | 9.07 | GRMZM2G087901
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: September 14th, 2013
Variation: April 13th, 2017
Gene Model: April 17th, 2013
|
| 5 months ago | cps5 | chloroplast protein synthesis5: NCBI: putative leucine--tRNA ligase, mitochondrialChloroplast protein synthesis 5: chloroplast leucyl-tRNA synthetase (A. Barkan, 2015) | 8.02 | GRMZM5G858471
| Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016 | | Reference: December 1st, 2015
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 12th, 2017
|
| 5 months ago | rpl40 | 50S ribosomal protein L40: npi220b was called npi553 but is listed in the database as npi220b | 8.01 | GRMZM2G157007
| Sisco, PH. 1991. Crop Sci 31:1263-1266 | | Reference: September 1st, 2003
Variation: April 12th, 2017
Gene Model: April 12th, 2017
|
| 5 months ago | myb23 | MYB-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: April 11th, 2017
|
| 5 months ago | umc168 | : NCBI: similar to Arabidopsis aldehyde dehydrogenase 22A1 | 7.06 | GRMZM2G135341
| Senior, ML et al. 1996. MNL 70:50-54 | | Reference: September 1st, 2003
Variation: April 11th, 2017
Gene Model: April 11th, 2017
|
| 5 months ago | afd1 | absence of first division1: male and female sterility; early meiosis | 6.07 | GRMZM2G059037
| Ren, J et al. 2017. Theor Appl Genet pp.doi: 10.1007/s00122-017-2892-6 | AT5G05490 (TAIR)
LOC_Os05g50410 (MSU/TIGR)
LOC_Os05g50410 (Gramene) | Reference: April 10th, 2017
Gene Product: July 30th, 2009
Variation: August 11th, 2011
Gene Model: July 14th, 2011
|
| 5 months ago | fdr1 | first division restitution1: confers high anther fertility in haploids | | | Ren, J et al. 2017. Theor Appl Genet pp.doi: 10.1007/s00122-017-2892-6 | | Reference: April 10th, 2017
Variation: September 6th, 2013
|
| 5 months ago | hb48 | Homeobox-transcription factor 48: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Tsuda, K et al. 2017. Plant Cell pp.doi: 10.1105/tpc.16.00967 | | Reference: April 7th, 2017
Variation: April 7th, 2017
|
| 5 months ago | hb76 | Homeobox-transcription factor 76: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Tsuda, K et al. 2017. Plant Cell pp.doi: 10.1105/tpc.16.00967 | | Reference: April 7th, 2017
Variation: April 7th, 2017
|
| 5 months ago | umc1710 | : NCBI: similar to Arabidopsis PLAC8 family protein | 7.04 | GRMZM2G008687
| | | Variation: April 7th, 2017
Gene Model: April 7th, 2017
|
| 5 months ago | asg34a(msd) | : | 7.02 | GRMZM2G054267
| Grant, D and Helentjaris, T. 1995. RFLP probe sequence submission to dbSTS | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 7th, 2017
|
| 5 months ago | asg49 | : NCBI: Pentatricopeptide repeat-containing protein | 7.03 | GRMZM2G003869
| Grant, D and Helentjaris, T. 1995. RFLP probe sequence submission to dbSTS | | Reference: September 1st, 2003
Variation: April 7th, 2017
Gene Model: April 7th, 2017
|
| 5 months ago | lg1 | liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright | 2.01 | | Li, CX et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12739 | | Reference: April 6th, 2017
Gene Product: December 18th, 2014
Variation: November 8th, 2007
|
| 5 months ago | npi393 | : | 6.03 | GRMZM2G158668
| Stuber, CW et al. 1992. Genetics 132:823-839 | | Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 6th, 2017
|
| 5 months ago | umc132a(chk) | : NCBI: putative choline kinase 2 | 6.07 | GRMZM2G014303
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: April 6th, 2017
Gene Model: April 6th, 2017
|
| 5 months ago | umc21 | : NCBI: Protein-tyrosine-phosphatase IBR5 | 6.05 | GRMZM2G174170
| Rocheford, TR. 1994. Proc Annu Corn Sorghum Ind Res Conf 49:239-249 | | Reference: September 1st, 2003
Variation: April 6th, 2017
Gene Model: April 6th, 2017
|
| 5 months ago | umc59a | : NPI linkage catalog of 1/25/91 places this probe on chromosome 7.NCBI: WAT1-related protein | 6.02 | GRMZM2G134930
| Beavis, WD et al. 1991. Theor Appl Genet 83:141-145 | | Reference: September 1st, 2003
Variation: April 5th, 2017
Gene Model: April 5th, 2017
|
| 5 months ago | ln1 | linoleic acid1: lower ratio of oleate to linoleate in kernelembryo oil content and composition,cloned by chromosome walk to high oil QTL; maybe allele of ln1 (Zheng 2008) | 6.04 - 6.04 | GRMZM2G169089
| Karn, A et al. 2017. G3 7:1157-1164 | | Reference: April 4th, 2017
Gene Product: July 22nd, 2008
Variation: August 16th, 2014
Gene Model: August 15th, 2014
|
| 5 months ago | psa1 | photosystemI1: Required for PSI accumulation. Harbors NifU domain implicated in Fe-S cluster assembly. Ortholog of Arabidopsis Nfu-IVa. (A. Barkan, 2015)lacks photosystem I core complex polypeptides; harbors NifU domain implicated in Fe-S cluster assemblyNCBI: NFU3 NifU-like protein 3 | 6.02 | GRMZM2G100976
| Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016 | | Reference: December 1st, 2015
Variation: April 4th, 2017
Gene Model: April 4th, 2017
|
| 5 months ago | zfp30 | putative zinc finger protein30: | 4.09 | GRMZM2G116079
| | | Gene Product: April 4th, 2017
Variation: May 19th, 2015
Gene Model: May 19th, 2015
|
| 5 months ago | znf2 | Zinc finger nuclease2: located between sh1 and bz1 (Hawkins et al., 2014) | 9.01 | GRMZM2G478553
| Hawkins, JS et al. 2014. Plant J 79:375-384 | | Reference: September 25th, 2015
Gene Product: April 4th, 2017
Variation: September 25th, 2015
Gene Model: September 25th, 2015
|
| 5 months ago | rzfl1 | RING zinc finger protein-like1: | 9.06 | | Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194 | | Reference: January 11th, 2009
Gene Product: April 4th, 2017
Variation: September 25th, 2007
|
| 5 months ago | tsh1 | tassel sheath1: leaves develop at base of tassel branches and spikelet pairstsh1 was positionally cloned by Whipple et al, 2010. It was initially mapped between umc2059 and bnlg1740. The position was narrowed using a larger population, synteny with rice provided two candidate genes, one was selected based on sequencing differences from progenitors for three independent EMS alleles. | 6.07 | | Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400 | | Reference: February 3rd, 2017
Gene Product: April 4th, 2017
Variation: October 6th, 2011
|
| 5 months ago | rhcp1 | ring hc protein1: expressed during brace root initiation and regulated by abiotic stresses. | | GRMZM2G024690
| Li, W-L et al. 2017. J Integrative Agric 16: 60345-60347 | | Reference: April 3rd, 2017
Gene Product: April 4th, 2017
Variation: April 3rd, 2017
Gene Model: April 3rd, 2017
|
| 5 months ago | tan1 | tangled1: (was py1) leaves short, pointed, fine white streaks; displays abnormally oriented cell divisions and altered growth and development throughout the plant | 6.05 | | Martinez, P; Luo, A; Sylvester, AW; Rasmussen, CG. 2017. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.1619252114 | | Reference: April 2nd, 2017
Variation: June 29th, 2005
|
| 5 months ago | rgh3 | rough endosperm3: Mature rgh3 seeds show a rough, etched, or pitted endosperm surface as well as a reduced seed size | | GRMZM5G849788
| Gault, CM, et al. 2017. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.1616173114 | | Reference: April 2nd, 2017
Gene Product: December 29th, 2011
Variation: December 29th, 2011
Gene Model: April 29th, 2013
|
| 5 months ago | hct5 | hydroxycinnamoyltransferase5: up-regulated in the Rp1-D21 mutant lines | 2.04 | GRMZM2G158083
| Xiao, WH et al. 2017. Plant Sci pp.doi: 10.1016/j.plantsci.2017.03.012 | | Reference: April 1st, 2017
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
|
| 5 months ago | cesa9 | cellulose synthase9: cDNA | 2.06 | | Xiao, WH et al. 2017. Plant Sci pp.doi: 10.1016/j.plantsci.2017.03.012 | | Reference: April 1st, 2017
Gene Product: October 7th, 2016
Variation: January 3rd, 2014
|
| 5 months ago | cesa13 | cellulose synthase13: NCBI: cellulose synthase A catalytic subunit 4 [UDP-forming]-like | | GRMZM2G037413
| Xiao, WH et al. 2017. Plant Sci pp.doi: 10.1016/j.plantsci.2017.03.012 | | Reference: April 1st, 2017
Gene Product: October 7th, 2016
Gene Model: April 1st, 2017
|
| 5 months ago | cml1 | coumarate ligase1: | 5.04 | GRMZM2G075333
| Xiao, WH et al. 2017. Plant Sci pp.doi: 10.1016/j.plantsci.2017.03.012 | | Reference: April 1st, 2017
Gene Product: April 1st, 2017
Gene Model: June 23rd, 2016
|
| 5 months ago | dek10 | defective kernel10: collapsed endosperm; lethal; cultured embryos green, curled, stubby; encodes a E-subgroup PPR protein | 4.06 - 4.11 | GRMZM2G087226
| Qi, WW et al. 2017. Genetics 205:1489-1501 | | Reference: March 31st, 2017
Gene Product: December 27th, 2016
Variation: February 20th, 2017
Gene Model: February 20th, 2017
|
| 5 months ago | mybr51 | MYB-related-transcription factor 51: | 5.09 | GRMZM2G379167
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: March 31st, 2017
|
| 5 months ago | col12 | 2C2-CO-like-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: zinc finger protein CONSTANS-LIKE 16 | 5.07 | GRMZM2G041991
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: September 1st, 2003
Variation: March 31st, 2017
Gene Model: March 31st, 2017
|
| 5 months ago | grf9 | growth-regulating factor9: NCBI: growth-regulating factor 9-like | 5.08 - 5.08 | GRMZM5G893117
| Zhang, D et al. 2008. Plant Sci 175:809-817 | | Reference: July 6th, 2015
Variation: March 30th, 2017
Gene Model: March 30th, 2017
|
| 5 months ago | umc126a | : NCBI: probable WRKY transcription factor 51 | 5.06 | | Sachs, MM pp.87-102 in Basra, AS. 1994.Harwood Academic Publishers | | Reference: September 1st, 2003
Variation: March 30th, 2017
|
| 5 months ago | d11 | dwarf11: dominant mutant that appears to inhibit GA biosynthesis. | | | Wang, YJ et al. 2017. Plant Mol Biol Rep pp.DOI: 10.1007/s11105-017-1028-0 | | Reference: March 30th, 2017
Variation: June 18th, 2013
|
| 5 months ago | umc1482 | : NCBI: NF-180 | 5.04 | GRMZM2G037865
| | | Variation: September 1st, 2003
Gene Model: March 29th, 2017
|
| 5 months ago | emp17 | empty pericarp17: mutants abolish the C-to-U editing of ccmB-43 and rps4-335 sites in mitochondria | | AC212684.3_FG012
| Yang, Y-Z et al. 2017. New Phytol pp.doi: 10.1111/nph.14424 | | Reference: January 26th, 2017
Gene Product: December 27th, 2016
Variation: March 28th, 2017
Gene Model: January 26th, 2017
|
| 5 months ago | emp10 | empty pericarp10: mutant effects the cis-splicing of nad2 intron 1 and seed development | | GRMZM2G078416
| Cai, MJ et al. 2017. Plant J pp.doi: 10.1111/tpj.13551 | | Reference: March 28th, 2017
Gene Product: December 27th, 2016
Variation: March 28th, 2017
Gene Model: March 28th, 2017
|
| 6 months ago | rz474a(dnaj) | : NCBI: putative dnaJ chaperone family protein | 5.03 | GRMZM2G134980
| | | Variation: March 24th, 2017
Gene Model: March 24th, 2017
|
| 6 months ago | ipt5 | isopentenyl transferase5: encodes an isopentenyl transferase | 5.01 | AC210013.4_FG005
| Vyroubalova, S, et al. 2009. Plant Physiol. 151:433-447 | | Reference: March 25th, 2014
Gene Product: March 19th, 2014
Variation: September 1st, 2003
Gene Model: March 23rd, 2017
|
| 6 months ago | vps1 | vesicular transport protein1: NCBI: similar to Aabidopsis Vps51/Vps67 family (components of vesicular transport) protein | 5.02 | GRMZM2G023858
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: March 23rd, 2017
Gene Model: March 23rd, 2017
|
| 6 months ago | asg73 | : | 5.02 | GRMZM2G122863
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Variation: March 23rd, 2017
Gene Model: March 23rd, 2017
|
| 6 months ago | wee1 | wee1: cDNA single copy, deduced protein 50% identity to protein kinase domain of human Wee1; SSR umc1255 | 4.11 | GRMZM5G878541
| Sun, YM, et al. 1999. Proc Natl Acad Sci, USA. 96:4180-4185 | | Reference: May 24th, 2010
Variation: March 21st, 2017
Gene Model: March 17th, 2017
|
| 6 months ago | pco131924a | : NCBI: similar to Arabdopsis L-ascorbate peroxidase | 5.05 | | | | Variation: March 21st, 2017
|
| 6 months ago | ms2 | male sterile2: like ms1; affected between vacuolation and pore formation | 9.03 | | Kang, D et al. 2017. Plant Breed pp.DOI: 10.1111/pbr.12468 | | Reference: March 17th, 2017
Variation: August 23rd, 2013
|
| 6 months ago | tcptf2 | TCP-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 4.09 | GRMZM2G003944
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: March 17th, 2017
Gene Model: March 17th, 2017
|
| 6 months ago | php20608a | : | 4.10 | GRMZM2G101818
| Beavis, WD et al. 1991. Theor Appl Genet 83:141-145 | | Reference: September 1st, 2003
Variation: March 17th, 2017
Gene Model: March 17th, 2017
|
| 6 months ago | cyp8 | cytochrome P-450 8: developing inflorescence, cDNA clone, assayed in transgenic yeast microsomes | 1.08 | | Sun, XC et al. 2017. doi: 10.1038/ncomms14752 | LOC_Os10g26340 (MSU/TIGR) | Reference: March 16th, 2017
Gene Product: September 1st, 2003
Variation: October 24th, 2012
|
| 6 months ago | cyp21 | cytochrome P-450 21: | | GRMZM2G054603
| | | Gene Product: August 18th, 2015
Gene Model: March 16th, 2017
|
| 6 months ago | cyc13 | cyclin13: | 4.07 | GRMZM2G075117
| | | Gene Product: June 26th, 2009
Variation: March 15th, 2017
Gene Model: March 15th, 2017
|
| 6 months ago | lg2 | liguleless2: like lg1, less extreme | 3.06 | | Kong, FY et al. 2017. Molecular Plant 10:516-519 | | Reference: March 14th, 2017
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
|
| 6 months ago | matl1 | matrilineal1: encodes a pollen-specific phospholipase; novel edits lead to a 6.7% haploid induction rate | | GRMZM2G471240
| Kelliher, T, et al. 2017. Nature. 542:105-109 | | Reference: March 14th, 2017
Gene Product: March 14th, 2017
Variation: February 10th, 2017
Gene Model: January 25th, 2017
|
| 6 months ago | umc1511 | : | 4.05 | GRMZM2G004878
| | | Variation: March 10th, 2017
Gene Model: March 11th, 2017
|
| 6 months ago | gras28 | GRAS-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: DELLA protein GAI-like | 4.04 | GRMZM2G342217
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 11th, 2017
|
| 6 months ago | glk22 | G2-like-transcription factor 22: NCBI: Putative MYB DNA-binding domain superfamily proteinLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 4.04 | GRMZM2G315506
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: March 10th, 2017
|
| 6 months ago | php20725a | : NCBI: plant viral-response family protein | 4.02 | GRMZM2G076435
| Llaca, V et al. 1997. Maize Genetics Conference Abstracts 39 | | Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 10th, 2017
|
| 6 months ago | cki1 | cyclin-dependent kinase inhibitor1: | 1.08 | GRMZM2G116885
| Xiao, QL et al. 2017. Sci. Rep. 7:43818 | | Reference: March 7th, 2017
Gene Product: March 8th, 2017
Variation: December 6th, 2016
Gene Model: December 6th, 2016
|
| 6 months ago | kri1 | ketol-acid reductoisomerase1: endosperm cDNA 5C05H04 similar to plant branched chain amino acid synthesis enzyme (aka uaz269)cdo Probe is an oat leaf cDNA. Minor band maps to this site. | 1.04 | GRMZM2G161868
| Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: March 8th, 2017
Gene Model: March 8th, 2017
|
| 6 months ago | cki6 | cyclin-dependent kinase inhibitor6: | 4.07 | GRMZM2G084570
| Xiao, QL et al. 2017. Sci. Rep. 7:43818 | | Reference: March 7th, 2017
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
|
| 6 months ago | cki7 | cyclin-dependent kinase inhibitor7: | | GRMZM2G343769
| Xiao, QL et al. 2017. Sci. Rep. 7:43818 | | Reference: March 7th, 2017
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
|
| 6 months ago | cki8 | cyclin-dependent kinase inhibitor8: | | GRMZM2G154414
| Xiao, QL et al. 2017. Sci. Rep. 7:43818 | | Reference: March 7th, 2017
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
|
| 6 months ago | cki5 | cyclin-dependent kinase inhibitor5: | 5.07 | GRMZM2G101613
| Xiao, QL et al. 2017. Sci. Rep. 7:43818 | | Reference: March 7th, 2017
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
|
| 6 months ago | cap1 | calcium pump1: anoxic root cDNA, low or single copy, complements yeast mutants defective in Ca++-pumps | 8.05 | | Subbaiah, C et al. 2017. Mol Plant-Microbe Interact pp.doi: 10.1094/MPMI-02-17-0026-R | | Reference: March 7th, 2017
Gene Product: May 20th, 2015
Variation: September 1st, 2003
|
| 6 months ago | crp1 | chloroplast RNA processing1: Chloroplast PPR protein. Activates translation of petA and psaC genes. Stabilizes petB-petD intergenic RNA termini. Binds petA, psaC, petD 5'UTRs. (A. Barkan, 2015)pale green seedling lethal, high chlorophyll leaf fluorescence;cytochromeb6/f and PSI deficient; protein translation | 7.03 - 7.06 | | Ferrari, R et al. 2017. Frontiers in Plant Science 8:163 | AT5G42310 (TAIR)
LOC_Os07g36390 (MSU/TIGR)
LOC_Os07g36390 (Gramene) | Reference: March 7th, 2017
Gene Product: December 27th, 2016
Variation: July 23rd, 2009
|
| 6 months ago | umc1641 | : NCBI: chaperone protein dnaJ 49-like | 3.09 | GRMZM2G064031
| | | Variation: March 7th, 2017
Gene Model: March 7th, 2017
|
| 6 months ago | umc17a | : NCBI plasma membrane associated protein | 3.08 | GRMZM2G057283
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Variation: March 7th, 2017
Gene Model: March 7th, 2017
|
| 6 months ago | cap3 | calcium pump3: paralog of cap1; calcium-transporting ATPase | | GRMZM2G162426
| Subbaiah, C et al. 2017. Mol Plant-Microbe Interact pp.doi: 10.1094/MPMI-02-17-0026-R | | Reference: March 7th, 2017
Gene Product: May 20th, 2015
Variation: May 20th, 2015
Gene Model: May 20th, 2015
|
| 6 months ago | cap4 | calcium pump4: paralog of cap1; calcium-transporting ATPase | | AC233878.1_FG004
| Subbaiah, C et al. 2017. Mol Plant-Microbe Interact pp.doi: 10.1094/MPMI-02-17-0026-R | | Reference: March 7th, 2017
Gene Product: May 20th, 2015
Gene Model: May 26th, 2015
|
| 6 months ago | prh16 | putative protein phosphatase 2C 16: | 2.01 | GRMZM2G056572
| | | Variation: February 17th, 2017
Gene Model: March 6th, 2017
|
| 6 months ago | umc1539 | : NCBI: selenoprotein family protein | 3.05 - 3.06 | GRMZM2G109429
| | | Variation: March 3rd, 2017
Gene Model: March 3rd, 2017
|
| 6 months ago | nactf132 | NAC-transcription factor 132: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Estermann, MA et al. 2017. Mol Breed 37:12 | | Reference: March 3rd, 2017
Gene Product: September 22nd, 2015
Variation: March 3rd, 2017
|
| 6 months ago | nactf49 | NAC-transcription factor 49: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Estermann, MA et al. 2017. Mol Breed 37:12 | | Reference: March 3rd, 2017
Gene Product: September 22nd, 2015
Variation: March 3rd, 2017
|
| 6 months ago | zar3 | Zea mays ARGOS homolog3: putative auxin response gene regulating organ size | | GRMZM2G137546
| Bruce, W et al. 2017. Patent Application 20170037424 | | Reference: March 2nd, 2017
Gene Product: August 3rd, 2015
Gene Model: April 14th, 2014
|
| 6 months ago | zar1 | Zea mays ARGOS1: affects yield, and response to drought | | GRMZM2G446201
| Bruce, W et al. 2017. Patent Application 20170037424 | | Reference: March 2nd, 2017
Gene Product: August 3rd, 2015
Gene Model: April 14th, 2014
|
| 6 months ago | zar8 | Zea mays ARGOS8: Over-expression can lead to improved drought tolerance | | GRMZM2G354338
| Bruce, W et al. 2017. Patent Application 20170037424 | | Reference: March 2nd, 2017
Gene Product: August 3rd, 2015
Gene Model: August 1st, 2015
|
| 6 months ago | zar6 | Zea mays ARGOS6: | | GRMZM2G162250
| Bruce, W et al. 2017. Patent Application 20170037424 | | Reference: March 2nd, 2017
Gene Product: August 3rd, 2015
Gene Model: August 1st, 2015
|
| 6 months ago | zar7 | Zea mays ARGOS7: | | GRMZM2G113583
| Bruce, W et al. 2017. Patent Application 20170037424 | | Reference: March 2nd, 2017
Gene Product: August 3rd, 2015
Gene Model: August 1st, 2015
|
| 6 months ago | zar9 | Zea mays ARGOS9: | | GRMZM2G082943
| Bruce, W et al. 2017. Patent Application 20170037424 | | Reference: March 2nd, 2017
Gene Product: August 3rd, 2015
Gene Model: August 1st, 2015
|
| 6 months ago | zar5 | Zea mays ARGOS5: | | GRMZM2G175995
| Bruce, W et al. 2017. Patent Application 20170037424 | | Reference: March 2nd, 2017
Gene Product: August 3rd, 2015
Gene Model: August 1st, 2015
|
| 6 months ago | zar4 | Zea mays ARGOS4: | | GRMZM2G066029
| Bruce, W et al. 2017. Patent Application 20170037424 | | Reference: March 2nd, 2017
Gene Product: August 3rd, 2015
Gene Model: August 1st, 2015
|
| 6 months ago | gts1 | Glutamine--tRNA ligase cytoplasmic1: | 3.03 | GRMZM2G048012
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: March 2nd, 2017
Gene Model: March 2nd, 2017
|
| 6 months ago | bnl8.15 | : NCBI: putative E3 ubiquitin-protein ligase LIN | 3.01 | GRMZM2G153127
| Armstrong, CL et al. 1992. Theor Appl Genet 84:755-762 | | Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 1st, 2017
|
| 6 months ago | umc32a | : NCBI: putative ubiquitin-conjugating enzyme E2 25 | 3.01 | GRMZM2G123519
| Grant, D and Helentjaris, T. 1995. RFLP probe sequence submission to dbSTS | | Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 1st, 2017
|
| 6 months ago | csu32a | : NCBI: heme-binding protein 2 alex heme-binding protein 2 precursor | 3.02 | GRMZM2G093405
| Savidan, YH et al. 1995. pp.86-92 in Taba, S. 1995.CIMMYT Maize Program | | Reference: September 1st, 2003
Variation: March 1st, 2017
Gene Model: March 1st, 2017
|
| 6 months ago | tcptf43 | TCP-transcription factor 43: Mapped upper band to this site.Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.simiiar to Arabidosis transcription factor TCP2 | 2.10 | GRMZM2G020805
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: February 28th, 2017
Gene Model: February 28th, 2017
|
| 6 months ago | sid1 | sister of indeterminate spikelet1: inflorescence architecture, apparent target of tasselseed4 microRNA (Chuck et al 2008), | | GRMZM2G176175
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: February 27th, 2017
Variation: October 17th, 2014
Gene Model: October 16th, 2014
Recommended by Lisa Harper:
September 2nd, 2008
|
| 6 months ago | ts6 | tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement. | 1.11 | GRMZM5G862109
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: February 27th, 2017
Variation: December 4th, 2013
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
|
| 6 months ago | ereb53 | AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Lowe, KS et al. 2016. Plant Cell pp.10.1105/tpc.16.00124 | LOC_Os1g67410 (MSU/TIGR) | Reference: October 1st, 2016
Gene Product: February 27th, 2017
|
| 6 months ago | dwil1 | dwarf & irregular leaf1: mutant plants have shorter internodes, shorter, wider and wrinkled leaves, as well as smaller leaf angle | | GRMZM2G013657
| Jiang, F et al. 2012. PLoS One 7:e37040 | | Reference: March 12th, 2013
Gene Product: February 27th, 2017
Variation: March 18th, 2013
Gene Model: March 12th, 2013
|
| 6 months ago | emp6 | empty pericarp6: mutant causes early arrest in grain development leading to an empty pericarp phenotype.similar to Arabidopsis ubiquitin thiolesterase | 2.07 | GRMZM2G048392
| Chettoor, AM et al. 2014. J Integr Plant Biol pp.DOI: 10.1111/jipb.12234 | | Reference: July 4th, 2014
Gene Product: July 4th, 2014
Variation: February 24th, 2017
Gene Model: February 24th, 2017
|
| 6 months ago | tms5 | thermosensitive male-sterile5: mutants were fertile at 24C, but male sterile at 32C; exhibit fertility transition at 28C | 4.01 | GRMZM2G147727
| Li, J et al. 2017. Journal of Genetics and Genomics pp.doi: 10.1016/j.jgg.2017.02.002 | LOC_Os02g12290 (MSU/TIGR)
Os02g0214300 (Gramene) | Reference: February 24th, 2017
Variation: February 24th, 2017
Gene Model: February 24th, 2017
|
| 6 months ago | ask2 | aspartate kinase2: lysine-threonine resistance | 2.06 | GRMZM2G052935
| Wang, X et al. 2007. J Exp Bot 58:2653-2660 | | Reference: September 9th, 2010
Gene Product: September 1st, 2003
Variation: September 9th, 2010
Gene Model: February 23rd, 2017
|
| 6 months ago | csu337 | : | 2.05 | GRMZM2G164440
| Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST | | Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 23rd, 2017
|
| 7 months ago | umc131 | : similar to predicted 2,3-dimethylmalate lyase-like isoform 2 of B. distachyon / phosphoenolpyruvate carboxylase-like protein of Arabidopsis | 2.05 | GRMZM2G024933
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Variation: February 22nd, 2017
Gene Model: February 22nd, 2017
|
| 7 months ago | pal2 | phenylalanine ammonia lyase2: | 2.04 - 2.04 | GRMZM2G441347
| Rius, SP et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2016.00523 | | Reference: May 6th, 2016
Gene Product: September 1st, 2003
Variation: February 21st, 2017
Gene Model: February 21st, 2017
|
| 7 months ago | mads68 | MADS-transcription factor 68: Ortholog of rice MADS47; regulates zein gene transcription by interacting with o2 (Qiao et al., 2016) | 1.02 | GRMZM2G059102
| Qi, WW et al. 2016. BMC Biotechnology 16:58 | LOC_Os03g08754 (MSU/TIGR) | Reference: February 20th, 2017
Variation: April 15th, 2016
Gene Model: April 15th, 2016
|
| 7 months ago | rtcs1 | rootless concerning crown and seminal roots1: root system reduced solely to a primary root yet plants can be carried to seed; cyclin cDNAs absent; naphthalene acetic acid induces adventitious roots | 1.02 | GRMZM2G092542
| Tai, H et al. 2017. J Exp Bot 68:403-414 | | Reference: February 17th, 2017
Gene Product: October 5th, 2009
Variation: October 5th, 2009
Gene Model: July 23rd, 2013
|
| 7 months ago | sweet1a | sugars will eventually be exported transporter1a: | 3.06 | GRMZM2G039365
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sps1 | sucrose phosphate synthase1: cDNA encodes a 1068 amino acid leaf protein; transgenic (E. coli) directs sucrose phosphate synthesis | 8.06 | | Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: September 1st, 2003
Variation: January 15th, 2015
|
| 7 months ago | sweet15a | sugars will eventually be exported transporter15a: | 4.05 | GRMZM2G168365
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Variation: September 1st, 2003
Gene Model: November 3rd, 2015
|
| 7 months ago | spp1 | sucrose-phosphatase1: | 8.04 | | Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: September 1st, 2003
Variation: August 2nd, 2013
|
| 7 months ago | sus1 | sucrose synthase1: (was sus2, css1) sucrose synthase-1 (SUS1) of embryo and other tissues, compare sh1; SSRs phi016, 032, 042 | 9.04 | GRMZM2G152908
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: October 25th, 2006
Variation: October 27th, 2014
Gene Model: August 12th, 2014
|
| 7 months ago | sweet4b | sugars will eventually be exported transporter4b: | 5.04 | GRMZM2G144581
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet11 | sugars will eventually be exported transporter11: | 1.06 | GRMZM2G368827
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | mstr1 | monosaccharide transporter1: | 7.00 | GRMZM2G135739
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Variation: July 14th, 2008
Gene Model: September 17th, 2015
|
| 7 months ago | mstr2 | monosaccharide transporter2: | 4.04 | GRMZM2G141034
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Variation: October 19th, 2010
Gene Model: September 17th, 2015
|
| 7 months ago | mstr4 | monosaccharide transporter4: | 9.04 | GRMZM2G034061
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Variation: July 14th, 2008
Gene Model: September 17th, 2015
|
| 7 months ago | sweet1b | sugars will eventually be exported transporter1b: | | GRMZM2G153358
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet2 | sugars will eventually be exported transporter2: | | GRMZM2G324903
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet3a | sugars will eventually be exported transporter3a: | | GRMZM2G179679
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet3b | sugars will eventually be exported transporter3b: | | GRMZM2G060974
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet4a | sugars will eventually be exported transporter4a: | | GRMZM2G000812
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet6b | sugars will eventually be exported transporter6b: | | GRMZM2G416965
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet12a | sugars will eventually be exported transporter12a: | | GRMZM2G133322
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet12b | sugars will eventually be exported transporter12b: | | GRMZM2G099609
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet13a | sugars will eventually be exported transporter13a: | | GRMZM2G173669
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet13b | sugars will eventually be exported transporter13b: | | GRMZM2G021706
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet13c | sugars will eventually be exported transporter13c: | | GRMZM2G179349
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet14a | sugars will eventually be exported transporter14a: | | GRMZM2G094955
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet14b | sugars will eventually be exported transporter14b: | | GRMZM2G015976
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet15b | sugars will eventually be exported transporter15b: | | GRMZM5G872392
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet17a | sugars will eventually be exported transporter17a: | | GRMZM2G106462
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet17b | sugars will eventually be exported transporter17b: | | GRMZM2G111926
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet16 | sugars will eventually be exported transporter16: | | GRMZM2G107597
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
|
| 7 months ago | sweet6a | sugars will eventually be exported transporter6a: | 3.09 | GRMZM2G157675
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: November 4th, 2015
Variation: March 31st, 2005
Gene Model: November 3rd, 2015
|
| 7 months ago | sps2 | sucrose phosphate synthase2: leaf cDNA csu328, sequence similar to sps1 | 3.05 | GRMZM2G140107
| Sosso, D et al. 2015. Nature Genetics 47:1489-1493 | | Reference: February 17th, 2017
Gene Product: September 1st, 2003
Variation: March 19th, 2015
Gene Model: March 18th, 2015
|
| 7 months ago | gst38 | glutathione transferase38: | 1.05 | GRMZM2G066369
| McGonigle, B et al. 2000. Plant Physiol 124:1105-1120 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: February 16th, 2017
|
| 7 months ago | mab23 | math-btb23: | 6.02 | GRMZM2G143782
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 14th, 2017
|
| 7 months ago | mab2 | math-btb2: | | GRMZM2G404188
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 13th, 2017
|
| 7 months ago | mab3 | math-btb3: | | GRMZM2G337139
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 13th, 2017
|
| 7 months ago | mab5 | math-btb5: | | GRMZM2G372171
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 13th, 2017
|
| 7 months ago | mab6 | math-btb6: | | GRMZM2G125162
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 13th, 2017
|
| 7 months ago | mab8 | math-btb8: | | GRMZM2G418031
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 13th, 2017
|
| 7 months ago | mab9 | math-btb9: | | GRMZM2G574887
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 13th, 2017
|
| 7 months ago | mab11 | math-btb11: | | GRMZM2G077428
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 13th, 2017
|
| 7 months ago | mab12 | math-btb12: | | GRMZM2G181276
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 13th, 2017
|
| 7 months ago | mab13 | math-btb13: | | GRMZM2G027688
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 13th, 2017
|
| 7 months ago | mab21 | math-btb21: | | GRMZM2G109738
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 14th, 2017
|
| 7 months ago | mab22 | math-btb22: | | GRMZM2G046238
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 14th, 2017
|
| 7 months ago | mab28 | math-btb28: | | GRMZM2G041963
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 14th, 2017
|
| 7 months ago | mab29 | math-btb29: | | GRMZM2G077951
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 14th, 2017
|
| 7 months ago | mab31 | math-btb31: | | | Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
|
| 7 months ago | mab19 | math-btb19: | 7.01 | GRMZM2G074323
| Juranic, M et al. 2012. Plant Cell 24:4974-4991 | | Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: February 14th, 2017
|
| 7 months ago | ts4 | tasselseed4: encodes miRNA that targets ts6 and sid1; tassel compact silky mass, upright, with pistillate and staminate florets; ear silky and proliferated | 3.05 - 3.05 | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: June 17th, 2016
Variation: October 17th, 2014
Recommended by George Chuck:
September 25th, 2007
|
| 7 months ago | ms45 | male sterile45: abnormal microspore wall formation, tassel specific, cDNA clone | 9.06 | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: June 27th, 2014
Variation: June 27th, 2014
|
| 7 months ago | pex1 | pollen extensin-like1: clone specifies repeat motif ser-pro4 | 2.09 | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
|
| 7 months ago | am1 | ameiotic1: male and female sterility - anaphase I equatorial; alleles am1-pra1(was pra1), am1-2 (was am2)affects switch to meiotic cell cycle | 5.02 | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Variation: August 11th, 2011
|
| 7 months ago | an1 | anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+ | 1.08 | GRMZM2G081554
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: August 16th, 2012
Variation: September 18th, 2015
Gene Model: November 7th, 2011
|
| 7 months ago | d1 | dwarf plant1: andromonoecious, short, compact plants; responds to gibberellins; d1-t intermediate in height | 3.03 | GRMZM2G036340
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: October 25th, 2014
Variation: October 30th, 2014
Gene Model: October 2nd, 2012
|
| 7 months ago | d3 | dwarf plant3: like d1, plant short and compact; "d2" mutation(s) are allelic (d2 is lapsed) | 9.03 | GRMZM2G093195
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: August 15th, 2012
Variation: May 19th, 2006
Gene Model: November 8th, 2012
|
| 7 months ago | d5 | dwarf plant5: like d1 | 2.02 | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: September 1st, 2003
Variation: December 3rd, 2015
|
| 7 months ago | ig1 | indeterminate gametophyte1: low male fertility, polyembryony, heterofertilization, polyploidy, androgenesis (male and female affected) | 3.06 - 3.07 | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: October 2nd, 2007
Variation: October 19th, 2010
|
| 7 months ago | ms22 | male sterile22: pollen mother cells degenerate | 7.02 | GRMZM2G442791
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: August 12th, 2012
Variation: February 12th, 2013
Gene Model: August 11th, 2012
|
| 7 months ago | ms23 | male sterile23: pollen mother cells degenerate | 8.01 - 8.02 | GRMZM2G021276
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: September 14th, 2016
Variation: December 4th, 2016
Gene Model: December 4th, 2016
|
| 7 months ago | ms8 | male sterile8: pollen mother cells degenerate | 8.06 | GRMZM2G119265
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: July 29th, 2013
Variation: July 29th, 2013
Gene Model: July 29th, 2013
|
| 7 months ago | ts2 | tassel seed2: like ts1, but tassel branches variably pistillate and staminate; sequence homologous to short chain alcohol dehydrogenases; SSR phi001 | 1.03 | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
|
| 7 months ago | ts5 | tassel seed5: dominant Ts5 tassels are upright with scattered, short silks; branches mostly pistillate toward the base | 4.03 - 4.05 | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Variation: September 1st, 2003
|
| 7 months ago | pme1 | pectin methylesterase1: pollen; cDNA and genomic sequences | 10.04 | GRMZM2G125356
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: September 1st, 2003
Variation: October 8th, 2015
Gene Model: October 8th, 2015
|
| 7 months ago | es4 | embryo sac4: one of 4-5 copy gene family; pre-zygotic, embryo sac specific; required for pollen tube growth arrest and burst | | GRMZM2G128301
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
|
| 7 months ago | ms32 | male sterile32: like ms1 | 2.00 - 2.10 | GRMZM2G163233
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: September 2nd, 2013
Variation: December 4th, 2016
Gene Model: September 2nd, 2013
|
| 7 months ago | ocl4 | outer cell layer4: | 1.05 - 1.06 | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: September 1st, 2003
Variation: February 23rd, 2013
|
| 7 months ago | expb1 | beta expansin1: belongs to a multigene family; most likely exists as two or more copies. | 9.04 | GRMZM2G146551
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: April 24th, 2008
Variation: December 1st, 2012
Gene Model: February 10th, 2015
|
| 7 months ago | ts3 | tassel seed3: dominant Ts3 tassel has large sections of either pistillate or staminate flowers in tandem; some pollen | 1.09 | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Variation: September 1st, 2003
|
| 7 months ago | tcl1 | tapetal cell layer1: Mutant fails to form coherent middle and tapetal layers, and there are extra cells between the endothecial and inner sporogenous (AR) cells. | | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Variation: February 12th, 2013
|
| 7 months ago | hrl1 | heirless1: maternal-effect dek | | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Variation: July 29th, 2016
|
| 7 months ago | nol1 | no legacy1: maternal-effect dek | | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Variation: July 29th, 2016
|
| 7 months ago | bsl2 | baseless2: maternal-effect dek | | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Variation: July 29th, 2016
|
| 7 months ago | sba1 | superbase1: maternal-effect dek | | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Variation: July 29th, 2016
|
| 7 months ago | mrn1 | maternally reduced endosperm1: maternal-effect dek | | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Variation: July 29th, 2016
|
| 7 months ago | bsl1 | baseless1: maternal-effect dek | | | Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Variation: July 29th, 2016
|
| 7 months ago | dcl101 | dicer-like 101: mutant plants have 'fuzzy tassel' and reduced stature. | 1.01 | GRMZM2G040762
| Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012 | | Reference: February 13th, 2017
Gene Product: September 5th, 2006
Variation: December 4th, 2014
Gene Model: November 12th, 2014
|
| 7 months ago | bhlh175 | bHLH-transcription factor 175: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Lu, X et al. 2017. Plant Physiol Biochem 113:78-88 | AT3G26744 (TAIR) | Reference: February 11th, 2017
Gene Product: September 14th, 2016
|
| 7 months ago | ms26 | male sterile26: tapetal cells abnormal, die early; microspores vacuolate early and abort after the tetrad stage | 1.02 - 1.02 | | Svitashev, SK et al. 2015. Plant Physiol 169:931-945 | | Reference: February 10th, 2017
Gene Product: September 30th, 2013
Variation: September 27th, 2013
|
| 7 months ago | als2 | acetolactate synthase2: sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide inhibition kineticsSecond band mapped to this site. Acetolactate pyruvate-lyase from tobacco used as the dup(als2) probe | 5.04 | GRMZM2G143008
| Svitashev, SK et al. 2015. Plant Physiol 169:931-945 | | Reference: February 10th, 2017
Gene Product: September 1st, 2003
Variation: September 18th, 2013
Gene Model: July 27th, 2016
|
| 7 months ago | als1 | acetolactate synthase1: sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide inhibition kinetics | 4.05 | | Svitashev, SK et al. 2015. Plant Physiol 169:931-945 | | Reference: February 10th, 2017
Gene Product: September 1st, 2003
Variation: September 18th, 2013
|
| 7 months ago | AY110393 | : | 1.04 | GRMZM2G084783
| | | Variation: September 25th, 2007
Gene Model: February 10th, 2017
|
| 7 months ago | cipk3 | calcineurin B-like-interacting protein kinase3: single copy genomic clone similar to plant protein kinase | 1.04 | GRMZM2G174896
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: February 10th, 2017
Gene Model: February 10th, 2017
|
| 7 months ago | rgd1 | ragged seedling1: (aka lbl1) seedling leaves narrow, thread-like, have difficulty in emerging; low temperature enhances expression | 6.01 - 6.01 | | Xu, J et al. 2017. Nucl Acid Res pp.doi: 10.1093/nar/gkx085 | | Reference: February 9th, 2017
Gene Product: December 18th, 2014
Variation: June 8th, 2015
|
| 7 months ago | baf1 | barren stalk fastigiate1: ear shoots often absent, or distorted and fused to culm at base; tassel branches erect, bundled, fused to culm at base | 9.02 | GRMZM2G072274
| Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400 | | Reference: February 3rd, 2017
Variation: August 15th, 2011
Gene Model: December 8th, 2014
|
| 7 months ago | bd1 | branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy | 7.05 | GRMZM2G307119
| Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400 | At5g18560 (TAIR)
LOC_Os07g47330 (MSU/TIGR)
LOC_Os01g21820 (Gramene) | Reference: February 3rd, 2017
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
|
| 7 months ago | id1 | indeterminate growth1: requires extended growth for flowering; vegetatively totipotent with gt1 and factors for perennialism | 1.08 | | Jamann, TM; Sood, S; Wisser, RJ; Holland, JB. 2017. PLoS One. 12:e0168910 | | Reference: February 3rd, 2017
Gene Product: January 3rd, 2015
Variation: August 3rd, 2015
|
| 7 months ago | na1 | nana plant1: short, erect dwarf; no response to gibberellins | 3.06 - 3.08 | GRMZM2G449033
| Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400 | | Reference: February 3rd, 2017
Gene Product: July 24th, 2012
Variation: December 22nd, 2016
Gene Model: December 20th, 2011
|
| 7 months ago | ra1 | ramosa1: ear and tassel many-branched; tassel branches taper to tip | 7.02 | | Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400 | | Reference: February 3rd, 2017
Gene Product: April 11th, 2007
Variation: August 20th, 2010
|
| 7 months ago | ra3 | ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis | 7.06 | | Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400 | | Reference: February 3rd, 2017
Gene Product: September 15th, 2013
Variation: December 3rd, 2010
|
| 7 months ago | wab1 | Wavy auricles in blades1: dominant confers auricle tissue in blade portion of leafrecessive mutants showed extremely acute tassel branch angles accompanied by a significant reduction in the size of the pulvinus compared with normal plants | 2.06 - 2.07 | GRMZM2G110242
| Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400 | | Reference: February 3rd, 2017
Gene Product: September 14th, 2016
Variation: November 2nd, 2014
Gene Model: November 2nd, 2014
|
| 7 months ago | ub2 | unbranched2: double mutant shows decrease in tassel branch number | | | Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400 | | Reference: February 3rd, 2017
Gene Product: December 18th, 2014
Variation: December 17th, 2014
|
| 7 months ago | phyB2 | phytochromeB2: phyB2 mutant is early flowering. Double mutant with phyB1 is pale, narrow with elongated leaf blades and elongated internodes, and contains less anthocyanin in sheath tissues. | 9.05 | | Jamann, TM; Sood, S; Wisser, RJ; Holland, JB. 2017. PLoS One. 12:e0168910 | | Reference: February 3rd, 2017
Gene Product: October 24th, 2007
Variation: January 11th, 2013
|
| 7 months ago | bif2 | barren inflorescence2: recessive few-branched tassel, normally no pollen shed; variable expression on ear with 0-2 spikelets produced at each floral node | 1.05 | | Xu, GH, et al. 2017. New Phytol. 0:doi: 10.1111/nph.14400 | AT2G34650 (TAIR) | Reference: February 3rd, 2017
Gene Product: July 19th, 2012
Variation: October 23rd, 2013
|
| 7 months ago | ga2ox13 | gibberellin 2-oxidase13: | | GRMZM2G031432
| Jamann, TM; Sood, S; Wisser, RJ; Holland, JB. 2017. PLoS One. 12:e0168910 | | Reference: February 3rd, 2017
Gene Product: October 27th, 2014
Gene Model: October 30th, 2014
|
| 7 months ago | conz1 | constans1: homologous to photoperiod genes constans (co) from Arabiodopsis and heading date 1 (hd1) in rice. (Miller 2008) | 9.03 | | Jamann, TM; Sood, S; Wisser, RJ; Holland, JB. 2017. PLoS One. 12:e0168910 | | Reference: February 3rd, 2017
Variation: July 28th, 2008
|
| 7 months ago | umc1811 | : | 1.06 | AC187262.4_FG007
| | | Variation: February 1st, 2017
Gene Model: February 1st, 2017
|
| 7 months ago | umc2224 | : | 1.01 | GRMZM2G076062
| | | Variation: February 1st, 2017
Gene Model: February 1st, 2017
|
| 7 months ago | csu3 | : cDNA partially sequenced, weak homology to yeast heat shock protein 26, SwissProt P15992 and to leghemoglobin, GenBank accession M91075 | 1.05 | GRMZM2G162292
| Baysdorfer, C. 1993. Personal communication to MaizeDB | | Reference: September 1st, 2003
Variation: February 15th, 2007
Gene Model: February 1st, 2017
|
| 7 months ago | yab11 | C2C2-YABBY-transcription factor 11: UMC 1989 map places umc67a on chromosome 5, but all other reports show chromosome 1Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.06 | GRMZM2G141955
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: October 16th, 2015
Variation: January 31st, 2017
Gene Model: January 31st, 2017
|
| 7 months ago | bhlh3 | bHLH-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.03 | GRMZM2G180452
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: January 31st, 2017
Gene Model: January 31st, 2017
|
| 7 months ago | ckx6 | cytokinin oxidase6: | 1.08 | GRMZM2G404443
| Gu, R et al. 2010. J Plant Growth Reg 29:428-440 | | Reference: March 28th, 2014
Gene Product: April 4th, 2014
Gene Model: January 27th, 2017
|
| 7 months ago | nactf48 | NAC-transcription factor 48: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.06 | GRMZM2G054252
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: January 27th, 2017
Gene Model: January 27th, 2017
|
| 7 months ago | spo1 | topoisomerase-like enzyme1: Homolog of SPO11, which generates double-stranded breaks along meiotic chromosomes | | GRMZM2G129913
| Sidhu, GK et al. 2017. BMC Genomics 18:106 | | Reference: January 27th, 2017
Gene Product: June 19th, 2014
Variation: June 20th, 2014
Gene Model: June 19th, 2014
|
| 7 months ago | spo2 | topoisomerase-like enzyme2: Homolog of SPO11, which generates double-stranded breaks along meiotic chromosomes | | GRMZM5G890820
| Sidhu, GK et al. 2017. BMC Genomics 18:106 | | Reference: January 27th, 2017
Gene Product: June 19th, 2014
Gene Model: June 19th, 2014
|
| 7 months ago | spo3 | topoisomerase-like enzyme3: Homolog of SPO11, which generates double-stranded breaks along meiotic chromosomes | 1.03 | GRMZM2G052581
| Sidhu, GK et al. 2017. BMC Genomics 18:106 | | Reference: January 27th, 2017
Gene Product: June 19th, 2014
Variation: January 27th, 2017
Gene Model: June 19th, 2014
|
| 7 months ago | rad51b | recombination protein51 gene b: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination | 3.05 | GRMZM2G084762
| Sidhu, GK et al. 2017. BMC Genomics 18:106 | | Reference: January 27th, 2017
Gene Product: August 12th, 2016
Variation: May 13th, 2012
Gene Model: June 19th, 2014
|
| 7 months ago | rad51a | recombination protein51 gene a: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination | 7.04 | GRMZM2G121543
| Sidhu, GK et al. 2017. BMC Genomics 18:106 | | Reference: January 27th, 2017
Gene Product: August 12th, 2016
Variation: April 19th, 2012
Gene Model: June 19th, 2014
|
| 7 months ago | glk6 | G2-like-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.07 | GRMZM2G117193
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: January 26th, 2017
Gene Model: January 26th, 2017
|
| 7 months ago | l15 | luteus15: like l4; lethal yellow seedling; chloroplast mRNA processing.Chloroplast PPR protein. Activates atpH translation. Stabilizes atpH and psaJ RNA termini. Binds atpI-atpH and psaJ-rpl33 intergenic regions. (A. Barkan, 2015) | 6.02 - 6.03 | GRMZM2G177169
| Miranda, RG et al. 2017. RNA-Publ RNA Soc pp.doi: 10.1261/rna.059568.116 | AT2G18940 (TAIR)
LOC_Os05g19380 (MSU/TIGR)
LOC_Os05g19380 (Gramene) | Reference: January 25th, 2017
Gene Product: December 30th, 2015
Variation: November 7th, 2012
Gene Model: November 6th, 2012
|
| 7 months ago | umc2243 | : NCBI: putative actin family protein | 1.11 | GRMZM2G053299
| | | Variation: January 25th, 2017
Gene Model: January 25th, 2017
|
| 7 months ago | umc2244 | : like Arabidopsis pantoate--beta-alanine ligase | 1.12 | GRMZM5G876146
| | | Variation: January 25th, 2017
Gene Model: January 25th, 2017
|
| 8 months ago | ms10 | male sterile10: like ms5; affected at microspore vacuolation | 10.04 - 10.05 | GRMZM5G830329
| Somaratne, Y et al. 2017. Plant J pp.doi: 10.1111/tpj.13476 | AT1G01280 (TAIR)
LOC_Os08g03682 (MSU/TIGR) | Reference: January 14th, 2017
Gene Product: January 20th, 2017
Variation: January 19th, 2017
Gene Model: January 19th, 2017
|
| 8 months ago | umc2237 | : NCBI: cyclin-D4-2-like | 1.07 | GRMZM2G133413
| | | Variation: January 19th, 2017
Gene Model: January 19th, 2017
|
| 8 months ago | umc2234 | : | 1.06 | GRMZM2G441903
| | | Variation: January 18th, 2017
Gene Model: January 18th, 2017
|
| 8 months ago | umc2235 | : | 1.06 | GRMZM2G074270
| | | Variation: January 18th, 2017
Gene Model: January 18th, 2017
|
| 8 months ago | bub1 | budding unhibited by benzimidazoles homolog1: | | GRMZM2G105750
| Su, H et al. 2017. New Phytol pp.doi: 10.1111/nph.14415 | | Reference: January 16th, 2017
Gene Product: May 13th, 2014
Variation: January 16th, 2017
Gene Model: January 15th, 2017
|
| 8 months ago | bub3 | budding unhibited by benzimidazoles homolog3: encodes WD40 repeat-like superfamily protein that is a mitotic checkpoint | 9.02 | GRMZM5G899300
| Su, H et al. 2017. New Phytol pp.doi: 10.1111/nph.14415 | | Reference: January 16th, 2017
Variation: January 16th, 2017
Gene Model: January 15th, 2017
|
| 8 months ago | umc2228 | : NCBI: glucan endo-1,3-beta-glucosidase 4 | 1.04 | GRMZM2G125241
| | | Variation: January 10th, 2017
Gene Model: January 10th, 2017
|
| 8 months ago | umc2229 | : similar to Arabidopsis rhomboid -like 2 | 1.04 | GRMZM2G093962
| | | Variation: January 10th, 2017
Gene Model: January 10th, 2017
|
| 8 months ago | stk2 | serine-threonine kinase2: Sequence orthologous to rice stk2, in maize BAC contig overlapping b0178I03 and b0004G18 (Alleman 2006) | 2.04 | GRMZM2G179268
| Alleman, M, et al. 2006. Nature. 442:295-298 | | Reference: August 7th, 2006
Gene Product: May 13th, 2014
Gene Model: January 9th, 2017
Recommended by Ed Coe:
May 1st, 2007
|
| 8 months ago | plt3 | phospholipid transfer protein homolog3: | 3.06 | GRMZM2G126397
| Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281 | | Reference: January 6th, 2017
Gene Product: September 1st, 2003
Variation: January 8th, 2017
Gene Model: January 6th, 2017
|
| 8 months ago | ms44 | male sterile44: dominant Ms44 plants male sterile | 4.08 | AC225127.3_FG003
| Fox, TW et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12689 | | Reference: January 6th, 2017
Gene Product: September 1st, 2003
Variation: January 6th, 2017
Gene Model: January 6th, 2017
|
| 8 months ago | umc1664 | : NCBI: putative bifunctional inhibitor/LTP/seed storage protein family | 1.06 | GRMZM2G083725
| Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281 | | Reference: January 6th, 2017
Gene Product: September 1st, 2003
Variation: December 2nd, 2016
Gene Model: December 2nd, 2016
|
| 8 months ago | umc2226 | : | 1.02 | GRMZM2G114055
| | | Variation: January 6th, 2017
Gene Model: January 6th, 2017
|
| 8 months ago | umc2227 | : NCBI: similar to B. distachyon putative HLH DNA-binding domain superfamily protein (EHC Jun 2017) | 1.04 | GRMZM2G412430
| | | Variation: January 6th, 2017
Gene Model: January 6th, 2017
|
| 8 months ago | mfs18 | male flower specific18: cDNA sequence, associated with tassel glume vascular bundles | 3.04 | EF517601.1_FG016
| Basse, C. 2005. Plant Physiol. 138:1774-1784 | | Reference: November 23rd, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 6th, 2017
|
| 8 months ago | AY110426 | : similar to Arabidopsis bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein | 1.11 | GRMZM2G006047
| Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281 | | Reference: January 6th, 2017
Gene Product: September 1st, 2003
Variation: July 29th, 2004
Gene Model: January 6th, 2017
|
| 8 months ago | nkd1 | naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm | | GRMZM2G129261
| Gontarek, BC; Neelakandan, AK; Wu, H; Becraft, P. 2016. Plant Cell. 0:doi: 10.1105/tpc.16.00609 | | Reference: January 6th, 2017
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
|
| 8 months ago | nkd2 | naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm | | GRMZM5G884137
| Gontarek, BC; Neelakandan, AK; Wu, H; Becraft, P. 2016. Plant Cell. 0:doi: 10.1105/tpc.16.00609 | | Reference: January 6th, 2017
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
|
| 8 months ago | ltp1 | lipid transfer protein1: | | GRMZM2G320373
| Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281 | | Reference: January 6th, 2017
Gene Product: September 1st, 2003
Gene Model: August 1st, 2016
|
| 8 months ago | plt4 | phospholipid transfer protein homolog4: | | GRMZM2G174680
| Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281 | | Reference: January 6th, 2017
Gene Product: September 1st, 2003
Gene Model: January 6th, 2017
|
| 8 months ago | plt5 | phospholipid transfer protein homolog5: | | GRMZM2G005991
| Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281 | | Reference: January 6th, 2017
Gene Product: September 1st, 2003
Gene Model: January 6th, 2017
|
| 8 months ago | plt6 | phospholipid transfer protein homolog6: | | GRMZM2G116167
| Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281 | | Reference: January 6th, 2017
Gene Product: September 1st, 2003
Gene Model: January 6th, 2017
|
| 8 months ago | nthr3 | anther-specific protein 3: | 7.03 | GRMZM2G073377
| Fox, TW et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12689 | | Reference: January 6th, 2017
Gene Product: September 1st, 2003
Variation: May 9th, 2009
Gene Model: July 28th, 2016
|
| 8 months ago | betl9 | basal endosperm transfer layer9: endosperm transfer cell specific protein regulated by mrp1 myb related protein1; RFLP gpm92 | 3.05 | GRMZM2G087413
| Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281 | | Reference: January 6th, 2017
Gene Product: September 1st, 2003
Variation: October 8th, 2009
Gene Model: July 4th, 2014
|
| 8 months ago | ipe1 | irregular pollen exine1: mutants are male sterile and exhibit a glossy outer anther surface, abnormal Ubish bodies, and defective pollen exine | 1.00 - 1.05 | GRMZM2G434500
| Chen, X et al. 2017. Plant Physiol 173:307-325 | AT1G12570 (TAIR) | Reference: January 5th, 2017
Gene Product: November 16th, 2016
Variation: November 16th, 2016
Gene Model: November 16th, 2016
|
| 8 months ago | dek2 | defective kernel2: discolored, scarred endosperm; lethal; cultured embryos green | 1.06 - 1.12 | GRMZM2G110851
| Qi, WW et al. 2017. Genetics 205:239-249 | | Reference: January 4th, 2017
Gene Product: December 27th, 2016
Variation: November 7th, 2016
Gene Model: November 7th, 2016
|
| 8 months ago | ub3 | unbranched3: double mutant shows decrease in tassel branch number | | | Du, YF et al. 2017. New Phytol pp.doi: 10.1111/nph.14391 | | Reference: January 4th, 2017
Gene Product: December 18th, 2014
Variation: December 17th, 2014
|
| 8 months ago | umc2181 | : similar to Arabidopsis heavy metal transport/detoxification domain-containing protein | 1.08 | GRMZM2G008290
| Stuber, CW et al. 1992. Genetics 132:823-839 | | Reference: September 1st, 2003
Variation: January 4th, 2017
Gene Model: January 4th, 2017
|
| 8 months ago | hb36 | Homeobox-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: homeodomain protein JUBEL1 | 1.10 | GRMZM2G396114
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: January 3rd, 2017
Gene Model: January 3rd, 2017
|
| 8 months ago | hb84 | Homeobox-transcription factor 84: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI:putative POX domain/homeobox DNA-binding domain family protein | 1.06 | GRMZM2G099319
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: December 30th, 2016
Gene Model: December 30th, 2016
|
| 8 months ago | c3h45 | C3H-transcription factor 345: NCBI: putative RNA-binding zinc finger family proteinLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to Zinc finger CCCH domain-containing protein of M. trunculata | 1.04 - 1.04 | GRMZM2G003424
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: December 30th, 2016
Gene Model: December 30th, 2016
|
| 8 months ago | polm2 | polymerase II transcription-mediator2: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II | 9.08 | GRMZM5G844080
| Nunez-Rios, T et al. 2017. bioRxiv doi: 10.1101/097204 | | Reference: December 29th, 2016
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
|
| 8 months ago | polm3 | polymerase II transcription-mediator3: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II | 9.03 | GRMZM2G053588
| Nunez-Rios, T et al. 2017. bioRxiv doi: 10.1101/097204 | | Reference: December 29th, 2016
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
|
| 8 months ago | cdc2 | cell division control protein2 homolog: cDNA sequence homologous to cdc2/cdc28 subfamily of serine/threonine protein kinases, complements yeast cdc28 | 1.01 | GRMZM2G008327
| Sabelli, PA et al. 2005. Maydica 50:485-496 | | Reference: June 24th, 2009
Gene Product: December 29th, 2016
Variation: April 23rd, 2010
Gene Model: March 30th, 2015
|
| 8 months ago | polm1 | polymerase II transcription-mediator1: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II | | GRMZM2G114459
| Nunez-Rios, T et al. 2017. bioRxiv doi: 10.1101/097204 | | Reference: December 29th, 2016
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
|
| 8 months ago | cdk8 | cyclin dependent kinase8: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II | 5.03 | GRMZM2G166771
| Nunez-Rios, T et al. 2017. bioRxiv doi: 10.1101/097204 | | Reference: December 29th, 2016
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
|
| 8 months ago | cyc12 | cyclin12: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II | 7.03 | GRMZM2G408242
| Nunez-Rios, T et al. 2017. bioRxiv doi: 10.1101/097204 | | Reference: December 29th, 2016
Gene Product: June 26th, 2009
Variation: December 29th, 2016
Gene Model: December 29th, 2016
|
| 8 months ago | ers14 | ethylene receptor1-14: | 5.01 | GRMZM2G102601
| Gallie, DR; Young, T. 2004. Mol Genet Genomics. 271:267-281 | | Reference: August 3rd, 2008
Variation: May 16th, 2014
Gene Model: December 28th, 2016
Recommended by Ed Coe:
January 8th, 2008
|
| 8 months ago | pex2 | pollen extensin-like2: clone like pex1 | 4.01 | GRMZM2G478929
| Stratford, S et al. 2001. Plant Mol Biol 46:43-56 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: December 28th, 2016
|
| 8 months ago | rxo1 | reaction to X. oryzae1: necrotic or hypersensitive reaction to inoculant | 6.00 | GRMZM2G334584
| Zhao, BY, et al. 2005. Proc Natl Acad Sci, USA. 102:15383-15388 | | Reference: May 22nd, 2009
Variation: May 13th, 2012
Gene Model: December 28th, 2016
|
| 8 months ago | expb2 | beta expansin2: expressed specifically in the elongating region of maize primary root | 1.05 | GRMZM2G021621
| Wu, YJ et al. 2001. Plant Physiol 126:1471-1479 | | Reference: May 21st, 2010
Gene Product: March 12th, 2008
Variation: December 28th, 2016
Gene Model: December 28th, 2016
|
| 8 months ago | rpl5a | 60S ribosomal protein L5-1 homolog a: endosperm cDNA 5C05D11 (uaz189), similar to ribosomal protein | 3.05 | GRMZM5G815894
| Helentjaris, T et al. 1994. MNL 68:101-104 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: April 9th, 2011
Gene Model: December 28th, 2016
|
| 8 months ago | ploc1 | plastocyanin homolog1: leaf cDNA csu257, similar to plastocyanin | 6.04 | GRMZM2G071450
| Baysdorfer, C. 1994. cDNA sequence submission to dbEST | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: March 27th, 2013
Gene Model: December 28th, 2016
|
| 8 months ago | cas1 | cycloartenol synthase1: leaf cDNA csu265 | 4.10 | GRMZM2G065494
| Davis, G et al. 1996. Maize Genetics Conference Abstracts 38 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: December 28th, 2016
|
| 8 months ago | prl1 | protease PrlC candidate1: endosperm cDNA 2C01C07, similar to bacterial oligopeptidase A | 5.08 | GRMZM2G133919
| Shen, B; Carneiro, N; Torres-Jerez, I; Stevenson, B; McCreery, T; Helentjaris, T; Baysdorfer, C; Alm. 1994. Plant Mol Biol 26:1085-1101 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: December 28th, 2016
|
| 8 months ago | aaa1 | adenosylmethionine aminotransferase1: endosperm cDNA 5C01E09 (uaz113) similar to bacterial biotin synthesis enzyme | 2.02 | GRMZM5G817886
| Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: December 28th, 2016
|
| 8 months ago | ras2 | Ras-related protein2: Homolog of mammalian binding GTP rab2 proteins | 10.04 | GRMZM2G173878
| Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141 | | Reference: January 12th, 2011
Variation: January 14th, 2011
Gene Model: December 28th, 2016
|
| 8 months ago | lhy1 | late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010) | 10.03 | GRMZM2G474769
| Ko, DK, et al. 2016. PLoS Genetics. 12:e1006197 | | Reference: October 3rd, 2016
Gene Product: July 31st, 2016
Variation: December 28th, 2016
Gene Model: December 28th, 2016
|
| 8 months ago | rhn1 | ras-related protein RHN1: | | GRMZM2G131254
| Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141 | | Reference: January 12th, 2011
Variation: January 14th, 2011
Gene Model: December 28th, 2016
|
| 8 months ago | ubi3 | ubiquitin3: candidate gene for major plant and ear height QTL | | GRMZM2G014119
| Ding, XY et al. 2017. Euphytica 213:21 | AT1G31340 (TAIR) | Reference: December 28th, 2016
Gene Product: September 1st, 2003
Gene Model: December 28th, 2016
|
| 8 months ago | ost1 | oligosaccharide transferase1: vegetative meristem cDNA 7C02F04 similar to an integral endoplasmic reticulum protein | 7.02 | GRMZM2G462325
| Helentjaris, T. 1995. Nucleotide sequence submission to dbEST | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: December 28th, 2016
|
| 8 months ago | phm5822 | : | 2.02 | | Liu, S et al. 2013. RNA Biology 10: 1501-1510 | AT1G79490 (TAIR) | Reference: December 9th, 2015
Gene Product: December 27th, 2016
|
| 8 months ago | cbl3 | calcineurin B-like3: | 1.09 | GRMZM2G112672
| Zhang, F et al. 2016. Plant Sci 253:118-129 | | Reference: December 27th, 2016
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 8 months ago | crs4 | chloroplast RNA splicing4: pale yellow green seedling lethal; splicing of ndhA and ndhB transcprits | | GRMZM2G481231
| Barkan, A. 2009. maize gene review DOI-crs4:unassigned | | Reference: November 17th, 2009
Gene Product: September 15th, 2012
Variation: December 27th, 2016
Gene Model: July 15th, 2011
|
| 8 months ago | umc1991 | : Similar to Arabidopsis MATE efflux family protein (multidrug and toxic compound extrusion (MATE) family)NCBI: transparent testa 12 protein | 1.08 | GRMZM5G842695
| | | Variation: December 27th, 2016
Gene Model: December 27th, 2016
|
| 8 months ago | gst20 | glutathione transferase20: | 3.08 | GRMZM2G447632
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: December 27th, 2016
|
| 8 months ago | gst40 | glutathione transferase40: | 1.09 | GRMZM2G054653
| McGonigle, B et al. 2000. Plant Physiol 124:1105-1120 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: June 13th, 2014
Gene Model: December 27th, 2016
|
| 8 months ago | ltk2 | leucine-rich transmembrane protein kinase2: belongs to a small gene family; ltk2 shares 98.6% nucleotide sequence homology with ltk3, and these genes could be products of a recent gene duplication located on chromosome 9L. | 9.07 | GRMZM2G330907
| Li, ZH and Wurtzel, E. 1998. Plant Mol Biol 37:749-761 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: January 10th, 2013
Gene Model: December 27th, 2016
|
| 8 months ago | fdx1 | ferredoxin1: chloroplast, light induced, N-terminal amino acid sequence of mature protein, cDNA sequence, SSR phi075 | 6.00 | GRMZM2G122337
| Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: December 27th, 2016
|
| 8 months ago | ppr*-59040 | pentatricopeptide repeat*-59040: pentatricopeptide repeat-containing protein orthologous to At3g59040 | | GRMZM2G005938
| | At3g59040 (TAIR)
LOC_Os08g09270 (MSU/TIGR)
LOC_Os08g09270 (Gramene) | Gene Product: December 27th, 2016
Variation: January 22nd, 2015
Gene Model: January 21st, 2015
|
| 8 months ago | ppr53 | pentatricopeptide repeat53: mutants exhibit a range of chlorotic phenotypes; specifically reduce transcript levels of ndhA (cp) and rrn23 (cp) | | GRMZM2G438524
| Zoschke, R et al. 2016. Plant J 85:594-606 | AT5G46580 (TAIR) | Reference: April 28th, 2016
Gene Product: December 27th, 2016
Variation: December 9th, 2015
Gene Model: December 9th, 2015
|
| 8 months ago | pprsmr4 | pentatricopeptide repeat smr4: | | GRMZM2G164202
| Liu, S et al. 2013. RNA Biology 10: 1501-1510 | AT2G17033 (TAIR) | Reference: December 9th, 2015
Gene Product: December 27th, 2016
Gene Model: December 9th, 2015
|
| 8 months ago | ppr*-GRMZM2G475897 | pentatricopeptide repeat*-GRMZM2G475897: | | GRMZM2G475897
| Liu, S et al. 2013. RNA Biology 10: 1501-1510 | AT1G18900 (TAIR) | Reference: December 9th, 2015
Gene Product: December 27th, 2016
Gene Model: December 9th, 2015
|
| 8 months ago | emp16 | empty pericarp16: mutant homozyous kernels have empty pericarp and are non-viable. | | GRMZM2G060516
| Xiu, Z-H et al. 2016. Plant J pp.DOI: 10.1111/tpj.13122 | | Reference: January 16th, 2016
Gene Product: December 27th, 2016
Variation: January 16th, 2016
Gene Model: January 16th, 2016
|
| 8 months ago | dek35 | defective kernel35: mutants have defective kernels | | GRMZM2G066749
| Chen, XZ et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.08.008 | | Reference: September 7th, 2016
Gene Product: December 27th, 2016
Variation: September 7th, 2016
Gene Model: September 7th, 2016
|
| 8 months ago | cbl11 | calcineurin B-like11: | | GRMZM2G007555
| Zhang, F et al. 2016. Plant Sci 253:118-129 | | Reference: December 27th, 2016
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 8 months ago | cbl2 | calcineurin B-like2: | | GRMZM2G173424
| Zhang, F et al. 2016. Plant Sci 253:118-129 | | Reference: December 27th, 2016
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 8 months ago | cbl5 | calcineurin B-like5: | | GRMZM2G041729
| Zhang, F et al. 2016. Plant Sci 253:118-129 | | Reference: December 27th, 2016
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 8 months ago | cbl7 | calcineurin B-like7: | | GRMZM2G033680
| Zhang, F et al. 2016. Plant Sci 253:118-129 | | Reference: December 27th, 2016
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 8 months ago | cbl8 | calcineurin B-like8: | | GRMZM2G110080
| Zhang, F et al. 2016. Plant Sci 253:118-129 | | Reference: December 27th, 2016
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 8 months ago | cbl12 | calcineurin B-like12: | | GRMZM2G137751
| Zhang, F et al. 2016. Plant Sci 253:118-129 | | Reference: December 27th, 2016
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 8 months ago | cbl10 | calcineurin B-like10: | | GRMZM2G116584
| Zhang, F et al. 2016. Plant Sci 253:118-129 | | Reference: December 27th, 2016
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
|
| 8 months ago | ppr521 | pentatricopeptide repeat521: | | GRMZM2G337701
| Wei, KF; Han, P. 2016. Mol Breed 36:170 | | Reference: December 26th, 2016
Gene Product: December 27th, 2016
Gene Model: December 26th, 2016
|
| 8 months ago | crs3 | chloroplast RNA splicing3: pale yellow green seedling lethal; splicing of ndhA and ndhB transcprits | | GRMZM2G053196
| Barkan, A. 2009. maize gene review DOI-crs4:unassigned | | Reference: November 17th, 2009
Gene Product: September 15th, 2012
Gene Model: December 27th, 2016
|
| 8 months ago | cbl6 | calcineurin B-like6: | 10.02 | GRMZM2G010093
| Zhang, F et al. 2016. Plant Sci 253:118-129 | | Reference: December 27th, 2016
Gene Product: October 19th, 2016
Variation: March 31st, 2005
Gene Model: October 19th, 2016
|
| 8 months ago | bm3 | brown midrib3: like bm1; has lowered activity of caffeic acid O-methyl transferase; application: modified lignin has improved digestibility in ruminants; silage corn with bm3 is in production. However, bm3 results in weaker stalks, reduced stover and grain yield, and in some cases reduced maturity; these effects appear genotype-specific | 4.04 | | Fornale, S et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw198 | | Reference: December 26th, 2016
Gene Product: February 16th, 2011
Variation: October 27th, 2015
|
| 8 months ago | rps8 (cp) | 30S ribosomal protein S8 gene: | | GRMZM5G845244
| Wei, KF; Han, P. 2016. Mol Breed 36:170 | | Reference: December 26th, 2016
Gene Product: September 1st, 2003
Gene Model: December 26th, 2016
|
| 8 months ago | psbJ (cp) | : | | GRMZM5G834496
| Wei, KF; Han, P. 2016. Mol Breed 36:170 | | Reference: December 26th, 2016
Gene Product: September 1st, 2003
Gene Model: December 26th, 2016
|
| 8 months ago | omt1 | Caffeoyl-CoA O-methyltransferase1: | 6.02 | GRMZM2G127948
| Fornale, S et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw198 | | Reference: December 26th, 2016
Gene Product: January 5th, 2014
Variation: December 26th, 2016
Gene Model: September 17th, 2014
|
| 9 months ago | umc1976 | : | 1.02 | GRMZM2G162535
| | | Variation: December 22nd, 2016
Gene Model: December 23rd, 2016
|
| 9 months ago | umc1955 | : NCBI: glycine-rich cell wall structural protein 2 | 1.08 | GRMZM2G067315
| | | Variation: December 22nd, 2016
Gene Model: December 22nd, 2016
|
| 9 months ago | cyc10 | cyclin10: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity. | | GRMZM2G107377
| Garza-Aguilar, SM et al. 2016. Physiol Plant pp.doi: 10.1111/ppl.12537 | | Reference: December 21st, 2016
Gene Product: June 26th, 2009
Variation: December 21st, 2016
Gene Model: December 21st, 2016
|
| 9 months ago | cyc11 | cyclin11: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity. | | GRMZM2G161382
| Garza-Aguilar, SM et al. 2016. Physiol Plant pp.doi: 10.1111/ppl.12537 | | Reference: December 21st, 2016
Gene Product: June 26th, 2009
Gene Model: December 21st, 2016
|
| 9 months ago | bz2 | bronze2: like bz1; anthers not fluorescent; an1-6923 mutation includes deletion for Bz2; encodes a glutathione S-transferase conjugating anthocyanins into the vacuole | 1.08 | | Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: March 31st, 2008
|
| 9 months ago | gst5 | glutathione transferase5: cDNA, safener-induced; high activity with fluorodifen herbicide | 1.11 | GRMZM2G308687
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
|
| 9 months ago | gst6 | glutathione transferase6: cDNA, functionally expressed in E. coli | 7.01 | GRMZM2G129357
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
|
| 9 months ago | gst7 | glutathione transferase7: cDNA, functionally expressed in E. coli | 3.05 | GRMZM2G028556
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 9th, 2010
Gene Model: July 27th, 2016
|
| 9 months ago | umc1917 | : | 1.04 | AC213099.3_FG001
| | | Variation: December 20th, 2016
Gene Model: December 20th, 2016
|
| 9 months ago | gst8 | glutathione transferase8: | | GRMZM2G156877
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
|
| 9 months ago | gst10 | glutathione transferase10: | 1.01 | GRMZM2G096153
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
|
| 9 months ago | gst11 | glutathione transferase11: | 1.01 | GRMZM2G119499
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
|
| 9 months ago | gst12 | glutathione S-transferase12: One of 12 Type I GSTs typed by sequence similarity | 1.01 | GRMZM2G096269
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: March 17th, 2006
Gene Model: July 27th, 2016
|
| 9 months ago | gst13 | glutathione transferase13: cDNA; SSR umc2099 | 9.07 | GRMZM2G126781
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 6th, 2010
Gene Model: July 27th, 2016
|
| 9 months ago | gst14 | glutathione transferase14: | 1.05 | GRMZM2G175134
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
|
| 9 months ago | gst16 | glutathione transferase16: | 7.03 | GRMZM5G895383
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 17th, 2010
Gene Model: April 18th, 2015
|
| 9 months ago | gst18 | glutathione transferase18: | 3.05 | GRMZM2G019090
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 17th, 2010
Gene Model: October 22nd, 2014
|
| 9 months ago | gst24 | glutathione transferase24: | 5.07 | GRMZM2G032856
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 20th, 2010
Gene Model: July 27th, 2016
|
| 9 months ago | gst25 | glutathione transferase25: | 9.08 | GRMZM2G161905
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
|
| 9 months ago | gst28 | glutathione transferase28: | 3.05 | GRMZM2G146475
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 20th, 2010
Gene Model: July 27th, 2016
|
| 9 months ago | gst30 | glutathione transferase30: | 1.04 | GRMZM2G044383
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 21st, 2010
Gene Model: July 27th, 2016
|
| 9 months ago | gst31 | glutathione transferase31: glutathione S-transferase subunit 31; matches PCO132874 (in silico from AF244696) placed by overgo on chromosome 1 | 1.01 | GRMZM2G475059
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 21st, 2010
Gene Model: April 27th, 2016
|
| 9 months ago | gst32 | glutathione transferase32: | 1.04 | GRMZM2G041685
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
|
| 9 months ago | gst33 | glutathione transferase33: | | | Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
|
| 9 months ago | gst35 | glutathione transferase35: | 9.08 | GRMZM2G161891
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
|
| 9 months ago | gst23 | glutathione transferase23: cDNA, SSR umc2098 | 7.02 | GRMZM2G416632
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 20th, 2010
Gene Model: July 27th, 2016
|
| 9 months ago | gst37 | glutathione transferase37: | 7.04 | GRMZM2G178079
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
|
| 9 months ago | gst39 | glutathione transferase39: | 1.05 | GRMZM2G028821
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
|
| 9 months ago | gst41 | glutathione transferase41: | 6.05 | GRMZM2G097989
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: September 1st, 2010
Gene Model: July 27th, 2016
|
| 9 months ago | gst42 | glutathione transferase42: | 1.04 | GRMZM2G025190
| Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
|
| 9 months ago | gst1 | glutathione-S-transferase1: presence-absence of isozyme bands between inbred lines, members of a family of polymorphic bands; transcripts correlate with dimer isoforms; single copy in Southerns; SSRs phi080, phi015, umc1069 | 8.08 - 8.09 | | Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: September 1st, 2003
|
| 9 months ago | gst3 | glutathione transferase3: cDNA sequence, correspondence to amino terminal of maize GSTIII, low or single copy, transgenic expression in E. coli results in enzyme activity similar to maize GSTIII enzyme | 3.05 | | Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 17th, 2010
|
| 9 months ago | gst4 | glutathione S-transferase4: constitutive and major subunit;amino acid sequence, cDNA sequence, transgenic expression, single or low copy gene, SSR phi073. | 3.05 | | Li, DZ et al. 2016. J Agric Food Chem pp.DOI: 10.1021/acs.jafc.6b04129 | | Reference: December 20th, 2016
Gene Product: September 1st, 2003
Variation: August 17th, 2010
|
| 9 months ago | ca2p6 | CCAAT-HAP2-transcription factor 26: | 1.08 | GRMZM5G829103
| Zhang, Z et al. 2016. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2016.08.020 | | Reference: August 8th, 2016
Gene Product: August 9th, 2016
Variation: December 17th, 2016
Gene Model: December 17th, 2016
|
| 9 months ago | bhlh132 | bHLH-transcription factor 132: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 3.05 | GRMZM2G114873
| Rabissi, A et al. 2016. Plant Sci 253:1-12 | | Reference: December 15th, 2016
Gene Product: September 14th, 2016
Gene Model: September 12th, 2016
|
| 9 months ago | nyc1 | non-yellow coloring1: plays an important role in chlorophyll content and other related traits, and different sites act on chlorophyll metabolism under different light intensities in maize seedlings | 3.01 | GRMZM2G170013
| Chan, AN et al. 2017. Euphytica 213:12 | AT4g13250 (TAIR)
LOC_Os01g12710 (MSU/TIGR)
Os01g0227100 (Gramene) | Reference: December 15th, 2016
Gene Product: December 15th, 2016
Variation: December 15th, 2016
Gene Model: December 15th, 2016
|
| 9 months ago | apx2 | ascorbate peroxidase2: leaf cDNA, similar to plant cytosolic ascorbate peroxidase; sequence distinct from apx1 | 2.08 | GRMZM2G140667
| Hong, CY et al. 2016. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2016.12.064 | | Reference: December 14th, 2016
Gene Product: September 1st, 2003
Variation: February 16th, 2015
Gene Model: February 16th, 2015
Recommended by Ed Coe:
January 8th, 2008
|
| 9 months ago | umc1849 | : similar to TPR ( tetratricopeptide) domain containing protein | 1.04 | GRMZM2G069618
| | | Variation: December 14th, 2016
Gene Model: December 14th, 2016
|
| 9 months ago | rel2 | ramosa1 enhancer locus2: rel2 mutants dramatically increase the formation of long branches in ears of both ra1 and ra2 mutants | 10.03 | | Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Variation: January 13th, 2012
|
| 9 months ago | umc1812 | : similar to Arabidopsis yippee-like protein | 1.06 | GRMZM2G169451
| | | Variation: September 1st, 2003
Gene Model: December 13th, 2016
|
| 9 months ago | lug3 | leunig-related3: | 1.12 | GRMZM2G036169
| Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Gene Model: December 12th, 2016
|
| 9 months ago | lug5 | leunig-related5: | 3.04 | | Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Variation: September 25th, 2007
|
| 9 months ago | tpl1 | topless-related1: | | GRMZM2G316967
| Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Gene Model: December 12th, 2016
|
| 9 months ago | tpl2 | topless-related2: | | GRMZM2G030422
| Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Gene Model: December 12th, 2016
|
| 9 months ago | lug1 | leunig-related1: | | GRMZM2G361398
| Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Gene Model: December 12th, 2016
|
| 9 months ago | lug4 | leunig-related4: | | GRMZM2G097640
| Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Gene Model: December 12th, 2016
|
| 9 months ago | lug6 | leunig-related6: | | GRMZM2G149708
| Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Gene Model: December 12th, 2016
|
| 9 months ago | lug7 | leunig-related7: | | GRMZM2G111247
| Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Gene Model: December 12th, 2016
|
| 9 months ago | lug8 | leunig-related8: | | GRMZM2G061186
| Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Gene Model: December 12th, 2016
|
| 9 months ago | lug2 | leunig-related2: | 5.08 | GRMZM2G079013
| Li, HY et al. 2016. J Plant Biol 59:603-615 | | Reference: December 12th, 2016
Gene Product: December 13th, 2016
Gene Model: December 12th, 2016
|
| 9 months ago | umc1715 | : | 1.09 | GRMZM2G171559
| | | Variation: December 8th, 2016
Gene Model: December 8th, 2016
|
| 9 months ago | umc1734 | : | 1.05 | GRMZM2G114667
| | | Variation: September 1st, 2003
Gene Model: December 8th, 2016
|
| 9 months ago | umc1737 | : | 1.11 | GRMZM2G082312
| | | Variation: December 8th, 2016
Gene Model: December 8th, 2016
|
| 9 months ago | umc1748 | : similar to M. trunculata auxin-induced protein | 1.06 | GRMZM2G386209
| | | Variation: December 8th, 2016
Gene Model: December 8th, 2016
|
| 9 months ago | umc1709 | : | 1.06 | GRMZM2G159996
| | | Variation: December 7th, 2016
Gene Model: December 7th, 2016
|
| 9 months ago | umc1711 | : | 1.02 | GRMZM2G107815
| | | Variation: December 7th, 2016
Gene Model: December 7th, 2016
|
| 9 months ago | opr5 | 12-oxo-phytodienoic acid reductase5: Predicted to have cytoplasmic localization (Zhang et al. 2005) | 2.04 | GRMZM2G087192
| Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: September 3rd, 2010
Variation: July 21st, 2008
Gene Model: November 27th, 2013
Recommended by Ed Coe:
May 1st, 2007
|
| 9 months ago | mir1 | maize insect resistance1: single copy cDNA | 6.02 | | Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: August 9th, 2015
Variation: July 29th, 2016
|
| 9 months ago | zim28 | ZIM-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 7.02 | GRMZM2G116614
| Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Variation: September 1st, 2003
Gene Model: December 6th, 2016
|
| 9 months ago | myb100 | MYB-transcription factor 100: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.05 | GRMZM2G143046
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: December 6th, 2016
Gene Model: December 6th, 2016
|
| 9 months ago | sci1 | subtilisin-chymotrypsin inhibitor homolog1: cDNA from germinating embryo infected with Fusarium moniliforme; similar to subtilisin-chymotrypsin inhibitor | 8.05 | | Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: September 1st, 2003
Variation: August 25th, 2015
|
| 9 months ago | fht1 | flavanone 3-hydroxylase1: (aka f3h) single copy cDNA similar to Antirrhinum homolog | 2.01 - 2.02 | | Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: June 8th, 2012
Variation: September 1st, 2003
|
| 9 months ago | mybr88 | MYB-related-transcription factor 88: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 4.09 | GRMZM2G064328
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: December 6th, 2016
|
| 9 months ago | aos1 | allene oxide synthase1: expression induction by herbivory and methyl jasmonate | 9.06 | GRMZM2G067225
| Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: October 29th, 2015
|
| 9 months ago | opr3 | 12-oxo-phytodienoic acid reductase3: | | GRMZM2G156712
| Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: September 3rd, 2010
Variation: June 29th, 2012
Gene Model: November 27th, 2013
|
| 9 months ago | opr4 | 12-oxo-phytodienoic acid reductase4: Cytoplasmic | 8.05 | | Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: September 3rd, 2010
Variation: November 5th, 2010
|
| 9 months ago | aos2 | allene oxide synthesis2: | | GRMZM2G072653
| Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
|
| 9 months ago | acs2 | 1-aminocyclopropane-1-carboxylate synthase2: | 2.02 | GRMZM2G164405
| Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041 | | Reference: December 6th, 2016
Gene Product: May 16th, 2016
Variation: May 3rd, 2007
Gene Model: January 21st, 2016
|
| 9 months ago | expa4 | alpha-expansin4: | 1.11 | GRMZM2G368886
| Wu, YJ et al. 2001. Plant Physiol 126:222-232 | | Reference: May 21st, 2010
Variation: December 1st, 2016
Gene Model: December 1st, 2016
|
| 9 months ago | umc1626 | : similar to Arabidopsis purple acid phosphatase 24 | 1.05 | GRMZM5G801886
| | | Variation: September 25th, 2007
Gene Model: November 30th, 2016
|
| 10 months ago | rf4 | restorer of fertility4: dominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6 | 8.01 - 8.01 | | Liu, YM et al. 2016. PeerJ 4:e2719 | | Reference: November 23rd, 2016
Variation: September 1st, 2003
|
| 10 months ago | emp4 | empty pericarp4: mitochondrion pentatricopeptide repeat (PPR) protein involved in specific expression of mitochondrial transcripts; impaired differentiation of basal endosperm transfer cells | 1.10 | GRMZM2G092198
| Sangiorgio, S et al. 2016. Plant Reproduction pp.doi: 10.1007/s00497-016-0294-6 | LOC_Os03g51840 (MSU/TIGR)
LOC_Os03g51840 (Gramene) | Reference: November 21st, 2016
Gene Product: September 15th, 2012
Variation: November 21st, 2016
Gene Model: November 29th, 2011
|
| 10 months ago | emp9 | empty pericarp9: | | | Sangiorgio, S et al. 2016. Plant Reproduction pp.doi: 10.1007/s00497-016-0294-6 | | Reference: November 21st, 2016
Variation: November 21st, 2016
|
| 10 months ago | emp8 | empty pericarp8: | | | Sangiorgio, S et al. 2016. Plant Reproduction pp.doi: 10.1007/s00497-016-0294-6 | | Reference: November 21st, 2016
Variation: November 21st, 2016
|
| 10 months ago | umc1605 | : NCBI: ankyrin repeat domain-containing protein 2 | 1.12 | GRMZM5G821637
| | | Variation: November 18th, 2016
Gene Model: November 18th, 2016
|
| 10 months ago | umc1611 | : | 1.05 | GRMZM2G132077
| | | Variation: November 18th, 2016
Gene Model: November 18th, 2016
|
| 10 months ago | rcc1 | regulator of chromosome condensation1: | | GRMZM2G302245
| Zheng, HY et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw195 | | Reference: November 18th, 2016
Variation: November 18th, 2016
Gene Model: November 18th, 2016
|
| 10 months ago | abk1 | aurora b kinase1: | | GRMZM2G132116
| Zheng, HY et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw195 | | Reference: November 18th, 2016
Variation: November 18th, 2016
Gene Model: November 18th, 2016
|
| 10 months ago | cdc202 | cell division cycle202: | | GRMZM2G130425
| Zheng, HY et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw195 | | Reference: November 18th, 2016
Variation: November 18th, 2016
Gene Model: November 18th, 2016
|
| 10 months ago | rcc2 | regulator of chromosome condensation2: | | GRMZM2G003565
| Zheng, HY et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw195 | | Reference: November 18th, 2016
Variation: November 18th, 2016
Gene Model: November 18th, 2016
|
| 10 months ago | rcc3 | regulator of chromosome condensation3: | | GRMZM2G135770
| Zheng, HY et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw195 | | Reference: November 18th, 2016
Variation: November 18th, 2016
Gene Model: November 18th, 2016
|
| 10 months ago | cdc201 | cell division cycle201: | 4.06 | GRMZM2G063192
| Zheng, HY et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw195 | | Reference: November 18th, 2016
Variation: March 31st, 2005
Gene Model: November 18th, 2016
|
| 10 months ago | umc1590 | : | 1.06 | GRMZM2G176962
| | | Variation: November 17th, 2016
Gene Model: November 17th, 2016
|
| 10 months ago | umc1601 | : NCBI: protein trichome birefringence-like 28 NCBI: putative DUF231 domain containing family protein | 1.05 | GRMZM2G038855
| | | Variation: November 17th, 2016
Gene Model: November 17th, 2016
|
| 10 months ago | umc1538a | : | 1.11 | GRMZM5G831951
| | | Variation: September 1st, 2003
Gene Model: November 16th, 2016
|
| 10 months ago | umc1553 | : NCBI type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like | 1.11 | GRMZM2G371210
| | | Variation: September 1st, 2003
Gene Model: November 16th, 2016
|
| 10 months ago | umc1558 | : NCBI: similar to Arabidopsis major facilitator protein | 1.05 | GRMZM2G047187
| | | Variation: November 16th, 2016
Gene Model: November 16th, 2016
|
| 10 months ago | alf18 | Alfin-like-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 4.03 | GRMZM2G008259
| Zhou, W et al. 2016. Genes Genom pp.DOI: 10.1007/s13258-016-0491-6 | | Reference: November 16th, 2016
Variation: September 25th, 2007
Gene Model: November 16th, 2016
|
| 10 months ago | aps1 | ATP sulfurylase1: mRNA differentially diminished in early- vs. late-senescing lines; similarity to ATP sulfurylase mRNA of Arabidopsis | 1.10 | GRMZM2G149952
| Smart, CM; Hosken, SE; Thomas, H; Greaves, JA; Blair, BG; Schuch, W. 1995. Physiol Plant 93:673-682 | | Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: November 15th, 2016
Gene Model: July 27th, 2016
|
| 10 months ago | nactf43 | NAC-transcription factor43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: NAC domain-containing protein 67-like | 1.05 | GRMZM2G082709
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: November 15th, 2016
|
| 10 months ago | iaa4 | Aux/IAA-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.10 | GRMZM2G159285
| Ludwig, YC et al. 2014. PLoS One 9:e107346 | | Reference: September 10th, 2014
Variation: November 15th, 2016
Gene Model: November 15th, 2016
|
| 10 months ago | umc1500 | : NCBI: DNA-binding protein HEXBP-like | 1.11 | GRMZM2G069218
| | | Variation: September 1st, 2003
Gene Model: November 14th, 2016
|
| 10 months ago | sbt1 | subtilisin1: expressed exclusively in the in the aleurone layer of the maize kernel within a short developmental time frame | | GRMZM2G437435
| Lopez, M et al. 2016. Planta pp.doi: 10.1007/s00425-016-2615-2 | | Reference: November 11th, 2016
Gene Product: November 11th, 2016
Variation: November 11th, 2016
Gene Model: November 11th, 2016
|
| 10 months ago | sbt2 | subtilisin2: expressed in the in the basal kernel in very early stages of development; also weakly expressed in unpollinated female flowers. | | GRMZM2G039538
| Lopez, M et al. 2016. Planta pp.doi: 10.1007/s00425-016-2615-2 | | Reference: November 11th, 2016
Gene Product: November 11th, 2016
Variation: November 11th, 2016
Gene Model: November 11th, 2016
|
| 10 months ago | sbt3 | subtilisin3: paralog of sbt2 | | GRMZM2G363552
| Lopez, M et al. 2016. Planta pp.doi: 10.1007/s00425-016-2615-2 | | Reference: November 11th, 2016
Gene Product: November 11th, 2016
Variation: November 11th, 2016
Gene Model: November 11th, 2016
|
| 10 months ago | umc1479 | : | 1.03 | GRMZM2G042032
| | | Variation: November 10th, 2016
Gene Model: November 10th, 2016
|
| 10 months ago | umc1484 | : | 1.01 | GRMZM2G107532
| | | Variation: November 10th, 2016
Gene Model: November 10th, 2016
|
| 10 months ago | umc1486 | : | 1.07 | GRMZM2G389567
| | | Variation: September 1st, 2003
Gene Model: November 10th, 2016
|
| 10 months ago | umc1469 | : | 1.05 | GRMZM2G466982
| | | Variation: September 1st, 2003
Gene Model: November 9th, 2016
|
| 10 months ago | umc1472 | : NCBI: similar to Arabidopsis putative nucleolar protein 5-2 | 1.04 | GRMZM2G124576
| | | Variation: November 9th, 2016
Gene Model: November 9th, 2016
|
| 10 months ago | umc1452 | : | 1.04 - 1.04 | GRMZM2G107463
| | | Variation: November 8th, 2016
Gene Model: November 8th, 2016
|
| 10 months ago | umc1461 | : | 1.05 | AC202185.4_FG004
| | | Variation: September 1st, 2003
Gene Model: November 8th, 2016
|
| 10 months ago | umc1467 | : | 1.02 | GRMZM2G134367
| | | Variation: November 8th, 2016
Gene Model: November 8th, 2016
|
| 10 months ago | ubl1 | U6 biogenesis like1: plays an important role in kernel and seedling development by influencing pre-mRNA splicing | | GRMZM2G156575
| Li, JK et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.016 | | Reference: November 7th, 2016
Gene Product: November 8th, 2016
Variation: November 7th, 2016
Gene Model: November 7th, 2016
|
| 10 months ago | myb83 | MYB-transcription factor 83: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.07 | | Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: November 4th, 2016
|
| 10 months ago | umc1421 | : NCBI: pyruvate kinase isozyme A, chloroplastic-like | 1.11 | GRMZM2G078200
| | | Variation: September 1st, 2003
Gene Model: November 4th, 2016
|
| 10 months ago | umc1431 | : NCBI: similar to Arabidopsis plantacyanin | 1.09 | GRMZM2G004012
| | | Variation: November 4th, 2016
Gene Model: November 4th, 2016
|
| 10 months ago | umc1446 | : NCBI: fatty acid elongase | 1.08 | GRMZM2G162508
| | | Variation: November 4th, 2016
Gene Model: November 4th, 2016
|
| 10 months ago | umc1790a | : Identified as "hornerin" at NCBI | 1.04 | GRMZM2G125304
| | | Variation: October 5th, 2016
Gene Model: November 4th, 2016
|
| 10 months ago | zmm6 | Zea mays MADS6: single copy; identified by cDNA hybridization in situ; early expression in male and female inflorescences, differentially in one member of a spikelet-primordium pair | 1.06 | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Gene Product: April 1st, 2011
Variation: August 8th, 2008
|
| 10 months ago | pebp5 | phosphatidylethanolamine-binding protein: | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Variation: January 31st, 2011
|
| 10 months ago | pebp6 | phosphatidylethanolamine-binding protein6: | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Variation: December 15th, 2010
|
| 10 months ago | pebp10 | phosphatidylethanolamine-binding protein10: | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Variation: December 8th, 2010
|
| 10 months ago | pebp13 | phosphatidylethanolamine-binding protein13: | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Variation: December 10th, 2010
|
| 10 months ago | pebp16 | phosphatidylethanolamine-binding protein16: | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Variation: December 15th, 2010
|
| 10 months ago | pebp20 | phosphatidylethanolamine-binding protein20: | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Variation: December 13th, 2010
|
| 10 months ago | pebp24 | phosphatidylethanolamine-binding protein24: | | GRMZM2G440005
| Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Variation: December 14th, 2010
Gene Model: July 28th, 2016
|
| 10 months ago | pebp26 | phosphatidylethanolamine-binding protein26: | | GRMZM2G400167
| Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Variation: December 14th, 2010
Gene Model: July 28th, 2016
|
| 10 months ago | tsh4 | tassel sheath4: tsh4 mutant tassels have one to five long tassel branches, instead of ~13 observed in non-mutant W22. In place of tassel branches, long bract leaves were present, clustered at the base of the tassel. | 7.03 | GRMZM2G307588
| Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Gene Product: December 18th, 2014
Variation: October 8th, 2011
Gene Model: October 6th, 2011
|
| 10 months ago | sbp17 | SBP-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Gene Product: December 18th, 2014
|
| 10 months ago | sbp20 | SBP-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Gene Product: December 18th, 2014
|
| 10 months ago | sbp27 | SBP-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Gene Product: December 18th, 2014
|
| 10 months ago | sbp29 | SBP-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Gene Product: December 18th, 2014
|
| 10 months ago | sbp3 (GRASSIUS) | SBP-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Gene Product: December 18th, 2014
|
| 10 months ago | zmm29 | Zea mays MADS29: single copy gene that co-segregates and shares 97% nt sequence identity with zmm18; probably an ortholog of rice GLOBOSA-like gene, OSMADS4; strongly expressed in male and female inflorescences and developing kernels. | 8.03 | GRMZM2G152862
| Li, YX, et al. 2016. Plant J. 86:391-402 | | Reference: November 3rd, 2016
Gene Product: September 1st, 2003
Variation: August 27th, 2013
Gene Model: July 2nd, 2014
|
| 10 months ago | umc140a | : | 1.09 | GRMZM2G108861
| Winkler, RG and Helentjaris, T. 1993. MNL 67:110-111 | | Reference: September 1st, 2003
Variation: November 2nd, 2016
Gene Model: November 2nd, 2016
|
| 10 months ago | fl1 | floury endosperm1: (was o4) endosperm opaque, soft; dosage effect with fl1-ref allele, but o4 allele is recessive | 2.04 | GRMZM2G094532
| Wang, GF et al. 2016. J Exp Bot pp.doi: 10.1093/jxb/erw396 | | Reference: October 31st, 2016
Gene Product: July 8th, 2013
Variation: September 16th, 2010
Gene Model: July 8th, 2013
|
| 10 months ago | o1 | opaque endosperm1: endosperm starch soft, opaque | 4.08 - 4.08 | GRMZM2G449909
| Wang, GF et al. 2016. J Exp Bot pp.doi: 10.1093/jxb/erw396 | | Reference: October 31st, 2016
Gene Product: September 1st, 2003
Variation: June 6th, 2016
Gene Model: August 28th, 2012
|
| 10 months ago | sk1 | silkless ears1: pistils abort, no silks | 2.03 - 2.04 | GRMZM2G021786
| Hayward, AP et al. 2016. Sci Adv 2:e1600991 | AT3G22250 (TAIR)
LOC_Os04g44354 (MSU/TIGR) | Reference: October 31st, 2016
Gene Product: October 31st, 2016
Variation: October 31st, 2016
Gene Model: October 31st, 2016
|
| 10 months ago | umc1403 | : NCBI:putative glycosyl hydrolase family 10 | 1.03 | GRMZM2G108032
| | | Variation: October 29th, 2016
Gene Model: October 30th, 2016
|
| 10 months ago | sbp16 | SBP-transcription factor16: NCBI: squamosa promoter-binding-like protein 15 Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.06 | GRMZM2G169270
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: October 29th, 2016
|
| 10 months ago | umc1396 | : | 1.06 | GRMZM2G005652
| | | Variation: September 1st, 2003
Gene Model: October 28th, 2016
|
| 10 months ago | umc1395 | : NCBI: cyclin-D5-2-like | 1.05 | GRMZM2G329655
| | | Variation: September 1st, 2003
Gene Model: October 27th, 2016
|
| 10 months ago | umc1397 | : similar to Arabidopsis mannose-1-phosphate guanylyltransferase | 1.03 | GRMZM2G160506
| | | Variation: October 27th, 2016
Gene Model: October 27th, 2016
|
| 10 months ago | rth2 | roothair defective2: root hairs elongate 1/5-1/4 of normal; plants are vigorous and show little nutritional deficiency | 5.04 - 5.09 | | Li, L et al. 2016. Sci. Rep. 6:34395 | | Reference: October 27th, 2016
Variation: September 1st, 2003
|
| 10 months ago | rth3 | roothair defective3: like rth1, but "stocking cap" roothair initials under electron microscope | 1.03 | | Li, L et al. 2016. Sci. Rep. 6:34395 | | Reference: October 27th, 2016
Variation: June 30th, 2012
|
| 10 months ago | lhcb9 | light harvesting chlorophyll binding protein9: cDNA sequence is a classII lhcb, unlike previously characterized lhcb genes which are classI (Viret et al 1993) | 1.08 | GRMZM2G414192
| Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: January 8th, 2005
Variation: October 27th, 2016
Gene Model: October 27th, 2016
|
| 10 months ago | tps2 | terpene synthase2: | | GRMZM2G046615
| Richter, A, et al. 2016. Plant Cell. 0:doi: 10.1105/tpc.15.00919 | | Reference: October 27th, 2016
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
|
| 10 months ago | tps3 | terpene synthase3: | | GRMZM2G064406
| Richter, A, et al. 2016. Plant Cell. 0:doi: 10.1105/tpc.15.00919 | | Reference: October 27th, 2016
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
|
| 10 months ago | cyp19 | cytochrome P-450 19: | | GRMZM2G102079
| Richter, A, et al. 2016. Plant Cell. 0:doi: 10.1105/tpc.15.00919 | | Reference: October 27th, 2016
Gene Product: September 26th, 2016
Gene Model: September 26th, 2016
|
| 10 months ago | cyp20 | cytochrome P-450 20: | | GRMZM2G139467
| Richter, A, et al. 2016. Plant Cell. 0:doi: 10.1105/tpc.15.00919 | | Reference: October 27th, 2016
Gene Product: September 26th, 2016
Gene Model: September 26th, 2016
|
| 10 months ago | rth6 | roothairless6: mutant roothairs do not elongate; encodes a D-type cellulose synthase | | GRMZM2G436299
| Li, L et al. 2016. Sci. Rep. 6:34395 | | Reference: October 27th, 2016
Gene Product: October 7th, 2016
Variation: October 7th, 2016
Gene Model: October 7th, 2016
|
| 10 months ago | umc1386b | : NCBI: serine/threonine-protein kinase Nek2-like | 1.05 | GRMZM2G052650
| | | Variation: October 27th, 2016
Gene Model: October 27th, 2016
|
| 10 months ago | et*-N1322C | etchedN1322C: | 3.05 - 3.09 | | Neuffer, MG and England, DJ. 1995. MNL 69:43-46 | | Reference: September 1st, 2003
Variation: October 26th, 2016
|
| 11 months ago | sudh1 | succinate dehydrogenase1: | 7.00 | GRMZM2G064799
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Variation: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh2 | succinate dehydrogenase2: chimeric protein, succinate dehydrogenase iron-sulfur protein and ribosomal protein S14, mitochondrial | 4.05 | GRMZM2G302259
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Variation: October 25th, 2016
Gene Model: July 28th, 2016
|
| 11 months ago | umc1374 | : NCBI: similar to Arabidopsis 26S proteasome regulatory subunit N3 | 1.07 - 1.07 | GRMZM2G119761
| | | Variation: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh3 | succinate dehydrogenase3: | | GRMZM2G056912
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh4 | succinate dehydrogenase4: | | GRMZM2G079888
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Variation: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh5 | succinate dehydrogenase5: | | GRMZM2G109271
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh6 | succinate dehydrogenase6: | | GRMZM2G398876
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh7 | succinate dehydrogenase7: | | GRMZM2G134134
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Variation: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh8 | succinate dehydrogenase8: | | GRMZM2G023760
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh9 | succinate dehydrogenase9: | | GRMZM2G160685
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh10 | succinate dehydrogenase10: | | GRMZM2G076524
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh11 | succinate dehydrogenase11: | | GRMZM2G306945
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | sudh12 | succinate dehydrogenase12: | | GRMZM2G146965
| Eprintsev, AT et al. 2016. J Plant Physiol 205:33-40 | | Reference: October 25th, 2016
Gene Product: October 25th, 2016
Variation: October 25th, 2016
Gene Model: October 25th, 2016
|
| 11 months ago | rmr6 | required to maintain repression6: Recessive rmr6 plants show reversions of paramutant pl1 and r1recessive changes B' phenotype to dark; like mop1 | 1.06 | GRMZM2G007681
| Li, QL; Liu, B. 2016. Planta pp.doi: 10.1007/s00425-016-2607-2 | | Reference: October 24th, 2016
Gene Product: March 27th, 2013
Variation: March 28th, 2013
Gene Model: March 27th, 2013
|
| 11 months ago | umc1323 | : NCBI: F-box/LRR-repeat protein 17-like | 1.05 | GRMZM2G100121
| | | Variation: October 18th, 2016
Gene Model: October 20th, 2016
|
| 11 months ago | umc1331 | : similar to glycine-rich RNA-binding protein 8 of Chlamydomonas | 1.11 | GRMZM5G874478
| | | Variation: October 19th, 2016
Gene Model: October 20th, 2016
|
| 11 months ago | umc1335 | : similar to Arabidopsis ABC transporter G family member 35 (NCBI) | 1.06 - 1.07 | GRMZM2G477872
| | | Variation: October 19th, 2016
Gene Model: October 20th, 2016
|
| 11 months ago | umc1356 | : NCBI: NEP1-interacting protein-like 1 | 1.07 | GRMZM2G112617
| | | Variation: October 20th, 2016
Gene Model: October 20th, 2016
|
| 11 months ago | myb38 | myb transcription factor38: cDNA isolated by homology to C1, sequence distinct from C1 | | GRMZM2G084583
| Agarwal, T et al. 2016. Sci. Rep. 6:28502 | | Reference: June 23rd, 2016
Gene Product: September 1st, 2003
Variation: October 20th, 2016
Gene Model: February 23rd, 2015
|
| 11 months ago | umc1306 | : simiilar to Arabidopsis 30S ribosomal protein S13 | 1.09 | GRMZM2G153476
| | | Variation: October 18th, 2016
Gene Model: October 18th, 2016
|
| 11 months ago | glk50 | G2-like-transcription factor50: | 1.05 | GRMZM2G034563
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh2 | protein phosphatase homolog2: endosperm cDNA 5C04B06 (uaz244), similar to human cell transforming protein | 7.04 | GRMZM2G140288
| Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank | | Reference: September 1st, 2003
Gene Product: October 18th, 2016
Variation: December 14th, 2012
Gene Model: May 9th, 2013
|
| 11 months ago | prh3 | protein phosphatase homolog3: | | GRMZM2G059453
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh4 | protein phosphatase homolog4: | | GRMZM2G166297
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh5 | protein phosphatase homolog5: | | GRMZM2G010855
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh6 | protein phosphatase homolog6: | | GRMZM2G308615
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh7 | protein phosphatase homolog7: | | GRMZM2G082487
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh8 | protein phosphatase homolog8: | | GRMZM2G122228
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh9 | protein phosphatase homolog9: | | GRMZM5G818101
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh10 | protein phosphatase homolog10: | | GRMZM2G019819
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh11 | protein phosphatase homolog11: | | GRMZM2G159811
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh13 | protein phosphatase homolog13: | | GRMZM2G134628
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh14 | protein phosphatase homolog14: | | GRMZM2G102255
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh15 | protein phosphatase homolog15: | | GRMZM2G383807
| Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
|
| 11 months ago | prh12 | protein phosphatase homolog12: | 6.07 | | Xiang, YL et al. 2016. Molecular Plant pp.doi: 10.1016/j.molp.2016.10.003 | | Reference: October 18th, 2016
Gene Product: September 1st, 2003
Variation: October 18th, 2016
|
| 11 months ago | lpa1 | low phytic acid1: decreased phytic acid in grain with corresponding increases in inorganic phosphate | 1.02 | GRMZM2G155242
| Pilu, R et al. 2009. Heredity 102:236-245 | | Reference: October 17th, 2016
Gene Product: September 1st, 2003
Variation: October 17th, 2016
Gene Model: April 23rd, 2013
Recommended by Ed Coe:
January 8th, 2008
|
| 11 months ago | b1 | colored plant1: dominant B1 plants have anthocyanin in major plant tissues; some alleles affect aleurone and embryo color; regulates flavonoid enzymes; SSR umc1776 | 2.03 | GRMZM2G172795
| Hollick, JB. 2016. Nat Rev Genet pp.doi: 10.1038/nrg.2016.115 | | Reference: October 17th, 2016
Gene Product: October 13th, 2010
Variation: February 14th, 2013
Gene Model: September 22nd, 2011
|
| 11 months ago | p1 | pericarp color1: dominant P1 regulates red pigment (phlobaphenes) in cob and pericarp (ex. P1-wr red cob; P1-rr red pericarp and cob) and in tassel glumes and husks; tissue-specific allele variations; SSR phi095 | 1.03 | | Hollick, JB. 2016. Nat Rev Genet pp.doi: 10.1038/nrg.2016.115 | | Reference: October 17th, 2016
Gene Product: October 13th, 2010
Variation: May 3rd, 2016
|
| 11 months ago | pl1 | purple plant1: Pl1 plant tissues have light-independent pigment, pl1 blue light-dependent; Pl1-Bh1, colored patches in c1 aleurone and in plant; transcriptional activator for flavonoid genes; SSR phi031, nc009, nc010. umc1014 | 6.04 | | Hollick, JB. 2016. Nat Rev Genet pp.doi: 10.1038/nrg.2016.115 | | Reference: October 17th, 2016
Gene Product: June 16th, 2015
Variation: March 28th, 2013
|
| 11 months ago | r1 | colored1: regulates anthocyanin pathway; dominant R1 (S element) confers function in aleurone; dominants represented by R1-r or r1-r (P element) confer function in anthers, leaf tip, brace roots, etc. | 10.06 | | Hollick, JB. 2016. Nat Rev Genet pp.doi: 10.1038/nrg.2016.115 | | Reference: October 17th, 2016
Gene Product: October 13th, 2010
Variation: October 8th, 2015
|
| 11 months ago | mrpa4 | multidrug resistance-associated protein 4: | 1.01 | GRMZM5G820122
| Pilu, R et al. 2003. Theor Appl Genet 107:980-987 | | Reference: May 11th, 2011
Variation: May 14th, 2011
Gene Model: October 17th, 2016
|
| 11 months ago | a1 | anthocyaninless1: colorless aleurone, green or brown plant; brown pericarp with P1-rr | 3.09 | | Hu, CY et al. 2016. Sci. Rep. 6:35479 | | Reference: October 14th, 2016
Gene Product: April 11th, 2013
Variation: August 25th, 2010
|
| 11 months ago | a2 | anthocyaninless2: like a1, but red pericarp with P1-rr | 5.03 | | Hu, CY et al. 2016. Sci. Rep. 6:35479 | | Reference: October 14th, 2016
Gene Product: June 7th, 2012
Variation: September 1st, 2003
|
| 11 months ago | c1 | colored aleurone1: C1 colored; C1-I dominant colorless; c1 colorless, includes c1-p (pigment inducible by light at germination), c1-n (not inducible) | 9.01 | | Hu, CY et al. 2016. Sci. Rep. 6:35479 | | Reference: October 14th, 2016
Gene Product: June 16th, 2015
Variation: March 27th, 2013
|
| 11 months ago | du1 | dull endosperm1: glassy, tarnished endosperm; encodes a starch synthase III, that with an isoamylase-type debranching enzyme represses accumulation of phytoglycogen | 10.03 | GRMZM2G141399
| Huang, HH et al. 2016. Sci. Rep. Article number: 27590 | | Reference: June 11th, 2016
Gene Product: October 14th, 2016
Variation: June 29th, 2015
Gene Model: February 28th, 2012
|
| 11 months ago | pr1 | red aleurone1: changes purple aleurone to red; encodes flavonoid 3'-hydroxylase | 5.05 | GRMZM2G025832
| Hu, CY et al. 2016. Sci. Rep. 6:35479 | | Reference: October 14th, 2016
Gene Product: June 3rd, 2011
Variation: June 10th, 2011
Gene Model: September 22nd, 2011
|
| 11 months ago | su2 | sugary2: endosperm glassy, translucent, sometimes wrinkled | 6.04 - 6.05 | | Larson, ME et al. 2016. J Biol Chem pp.doi: 10.1074/jbc.M116.754705 | | Reference: October 14th, 2016
Gene Product: October 14th, 2016
Variation: October 7th, 2010
|
| 11 months ago | whp1 | white pollen1: duplicate factor with c2 for pollen color and for anthocyanins | 2.08 | | Hu, CY et al. 2016. Sci. Rep. 6:35479 | | Reference: October 14th, 2016
Gene Product: September 1st, 2003
Variation: August 24th, 2013
|
| 11 months ago | a4 | anthocyaninless4: homolog/duplicate of a1, with differences at 59 positions, including deletions; mRNA expressed in tissues analyzed-cob, husks, kernel; function of gene product not known (Bernhardt et al. 1998) | 8.06 | | Hu, CY et al. 2016. Sci. Rep. 6:35479 | | Reference: October 14th, 2016
Variation: August 30th, 2013
|
| 11 months ago | chi3 | chalcone flavanone isomerase3: Similar to chi1; expressed in various tissues, but not root, embryo, or internode (Sekhon et al 2011) | 5.00 | GRMZM2G119186
| Hu, CY et al. 2016. Sci. Rep. 6:35479 | | Reference: October 14th, 2016
Gene Product: May 8th, 2012
Variation: May 13th, 2012
Gene Model: May 9th, 2012
|
| 11 months ago | pac1 | pale aleurone color1: recessive, non-lethal, regulates reduced pigment in kernels | 5.06 | | Hu, CY et al. 2016. Sci. Rep. 6:35479 | | Reference: October 14th, 2016
Variation: February 23rd, 2013
|
| 11 months ago | ss5 | starch synthase5: | | GRMZM2G130043
| Liu, H et al. 2015. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01013 | | Reference: December 5th, 2015
Gene Product: October 14th, 2016
Gene Model: December 5th, 2015
|
| 11 months ago | ss4 | starch synthase4: | | GRMZM2G044744
| Liu, H et al. 2015. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01013 | | Reference: December 5th, 2015
Gene Product: October 14th, 2016
Gene Model: December 5th, 2015
|
| 11 months ago | ss1 | starch synthase I: single copy endosperm specific cDNA; encoded-protein cross-reacts with antibody to granule associated starch synthase I | 9.02 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: October 14th, 2016
Variation: October 7th, 2010
|
| 11 months ago | umc1292 | : similar to Arabidopsis serine/threonine-protein kinase | 1.01 | GRMZM2G176604
| | | Variation: October 12th, 2016
Gene Model: October 12th, 2016
|
| 11 months ago | zp1 | zein alpha protein1: genomic sequence pMS2, SSR phi096 | 4.04 | | Yang, J et al. 2016. Genetics 204:581-591 | | Reference: October 11th, 2016
Gene Product: September 1st, 2003
Variation: May 19th, 2015
|
| 11 months ago | o2 | opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112 | 7.01 | | Yang, J et al. 2016. Genetics 204:581-591 | | Reference: October 11th, 2016
Gene Product: September 1st, 2003
Variation: June 6th, 2016
|
| 11 months ago | pbf1 | prolamin-box binding factor1: endosperm cDNA, SSR umc1065 | 2.06 | | Yang, J et al. 2016. Genetics 204:581-591 | | Reference: October 11th, 2016
Gene Product: September 1st, 2003
Variation: April 20th, 2005
|
| 11 months ago | ohp1 | opaque2 heterodimerizing protein1: o2 heterodimerizing protein; one of two loci | 1.11 | | Yang, J et al. 2016. Genetics 204:581-591 | | Reference: October 11th, 2016
Gene Product: September 1st, 2003
Variation: February 2nd, 2015
|
| 11 months ago | ohp2 | opaque2 heterodimerizing protein2: cDNA sequence, SSRs nc007, phi024 | 5.01 | | Yang, J et al. 2016. Genetics 204:581-591 | | Reference: October 11th, 2016
Gene Product: September 1st, 2003
Variation: April 25th, 2015
|
| 11 months ago | zp27 | 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster | 7.02 | | Yang, J et al. 2016. Genetics 204:581-591 | | Reference: October 11th, 2016
Gene Product: September 17th, 2010
Variation: September 16th, 2010
|
| 11 months ago | az19D2 | alpha zein 19kDa D2: member of a two-gene family, z1D, closely linked | 1.05 | AF546187.1_FG007
| Yang, J et al. 2016. Genetics 204:581-591 | | Reference: October 11th, 2016
Gene Product: September 1st, 2003
Gene Model: November 21st, 2014
|
| 11 months ago | zp2 | zein protein2: encodes a 19 kD alpha zein | | AF546188.1_FG005
| Yang, J et al. 2016. Genetics 204:581-591 | | Reference: October 11th, 2016
Gene Product: September 1st, 2003
Gene Model: August 1st, 2016
|
| 11 months ago | zp3 | zein protein3: encodes a 22 kD alpha zein | | GRMZM2G160739
| Yang, J et al. 2016. Genetics 204:581-591 | | Reference: October 11th, 2016
Gene Product: September 1st, 2003
Gene Model: August 1st, 2016
|
| 11 months ago | sacd11 | stearoyl-acyl-carrier-protein desaturase11: | 10.04 | AC215690.3_FG002
| Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
|
| 11 months ago | sacd3 | stearoyl-acyl-carrier-protein desaturase3: | 1.05 | | Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
|
| 11 months ago | sacd4 | stearoyl-acyl-carrier-protein desaturase4: | | GRMZM2G003368
| Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
|
| 11 months ago | sacd5 | stearoyl-acyl-carrier-protein desaturase5: | | GRMZM2G026793
| Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
|
| 11 months ago | sacd6 | stearoyl-acyl-carrier-protein desaturase6: | | GRMZM2G027673
| Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
|
| 11 months ago | sacd7 | stearoyl-acyl-carrier-protein desaturase7: | | GRMZM2G073540
| Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
|
| 11 months ago | sacd8 | stearoyl-acyl-carrier-protein desaturase8: | | GRMZM5G883417
| Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
|
| 11 months ago | sacd10 | stearoyl-acyl-carrier-protein desaturase10: | | GRMZM2G119305
| Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
|
| 11 months ago | sacd9 | stearoyl-acyl-carrier-protein desaturase9: | 8.06 | GRMZM2G316362
| Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
|
| 11 months ago | sacd2 | stearoyl-acyl-carrier-protein desaturase2: encodes Stearoyl-acyl carrier protein desaturase | 8.06 | GRMZM2G180399
| Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
Variation: June 15th, 2016
Gene Model: June 15th, 2016
|
| 11 months ago | sacd1 | stearoyl-acyl-carrier-protein desaturase1: encodes Stearoyl-acyl carrier protein desaturase | 3.05 | GRMZM5G852502
| Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5 | | Reference: October 10th, 2016
Gene Product: October 10th, 2016
Variation: June 15th, 2016
Gene Model: June 15th, 2016
|
| 11 months ago | hb2 | hemoglobin2: suppression of expression is associated with programmed cell death (Huang et al 2014) | 6.06 | GRMZM2G168898
| Mira, MM et al. 2016. Plant Physiol pp.doi: 10.1104/pp.16.01150 | | Reference: October 9th, 2016
Gene Product: September 1st, 2003
Gene Model: May 15th, 2014
|
| 11 months ago | hb1 | hemoglobin1: suppression of expression associated with programmed cell death (Huang et al 2014)cDNA sequence; SSR umc1733;cloned hb gene codes for a predicted protein of 164 amino acids | 9.06 | GRMZM2G067402
| Mira, MM et al. 2016. Plant Physiol pp.doi: 10.1104/pp.16.01150 | | Reference: October 9th, 2016
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: May 15th, 2014
|
| 11 months ago | acs7 | 1-aminocyclopropane-1-carboxylate synthase7: | 10.05 | GRMZM5G894619
| Mira, MM et al. 2016. Plant Physiol pp.doi: 10.1104/pp.16.01150 | | Reference: October 9th, 2016
Gene Product: May 16th, 2016
Variation: August 6th, 2008
Gene Model: January 21st, 2016
|
| 11 months ago | acco20 | 1-aminocyclopropane-1-carboxylate oxidase20: | 4.07 | GRMZM2G126732
| Mira, MM et al. 2016. Plant Physiol pp.doi: 10.1104/pp.16.01150 | | Reference: October 9th, 2016
Gene Product: May 16th, 2016
Variation: March 25th, 2015
Gene Model: March 25th, 2015
|
| 11 months ago | acco35 | 1-aminocyclopropane-1-carboxylate oxidase35: | 5.07 | GRMZM2G052422
| Mira, MM et al. 2016. Plant Physiol pp.doi: 10.1104/pp.16.01150 | | Reference: October 9th, 2016
Gene Product: May 16th, 2016
Variation: May 19th, 2015
Gene Model: May 19th, 2015
|
| 11 months ago | acco15 | 1-aminocyclopropane-1-carboxylate oxidase15: | | GRMZM2G166639
| Mira, MM et al. 2016. Plant Physiol pp.doi: 10.1104/pp.16.01150 | | Reference: October 9th, 2016
Gene Product: May 16th, 2016
Gene Model: May 16th, 2016
|
| 11 months ago | acco31 | 1-aminocyclopropane-1-carboxylate oxidase15: | | GRMZM2G072529
| Mira, MM et al. 2016. Plant Physiol pp.doi: 10.1104/pp.16.01150 | | Reference: October 9th, 2016
Gene Product: May 16th, 2016
Gene Model: May 16th, 2016
|
| 11 months ago | acs6 | 1-aminocyclopropane-1-carboxylate synthase6: | 1.10 | GRMZM2G054361
| Mira, MM et al. 2016. Plant Physiol pp.doi: 10.1104/pp.16.01150 | | Reference: October 9th, 2016
Gene Product: May 16th, 2016
Variation: August 4th, 2008
Gene Model: January 21st, 2016
|
| 11 months ago | umc1290 | : | 1.10 | GRMZM2G026780
| | | Variation: September 1st, 2003
Gene Model: October 7th, 2016
|
| 11 months ago | dof36 | C2C2-Dof-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | | | Qi, X et al. 2016. Plant Mol Biol pp.doi: 10.1007/s11103-016-0543-y | | Reference: October 7th, 2016
Variation: October 7th, 2016
|
| 11 months ago | cesa1 | cellulose synthase1: | 8.03 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: October 7th, 2016
Variation: June 29th, 2005
|
| 11 months ago | cesa2 | cellulose synthase2: cDNA | 6.05 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: October 7th, 2016
Variation: October 9th, 2012
|
| 11 months ago | cesa3 | cellulose synthase3: cDNA | 3.03 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: October 7th, 2016
Variation: February 27th, 2015
|
| 11 months ago | cesa4 | cellulose synthase4: cDNA | 7.02 | GRMZM2G424832
| Appenzeller, L, et al. 2004. 11:287-299 | | Reference: January 24th, 2007
Gene Product: October 7th, 2016
Variation: January 3rd, 2014
Gene Model: July 22nd, 2015
|
| 11 months ago | cesa5 | cellulose synthase5: | 1.11 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: October 7th, 2016
Variation: September 1st, 2003
|
| 11 months ago | cesa7 | cellulose synthase7: | 7.02 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: October 7th, 2016
Variation: January 3rd, 2014
|
| 11 months ago | cesa6 | cellulose synthase6: | 1.11 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: October 7th, 2016
Variation: November 14th, 2012
|
| 11 months ago | cesa8 | cellulose synthase8: cDNA | 7.02 | | Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855 | | Reference: September 27th, 2011
Gene Product: October 7th, 2016
Variation: January 3rd, 2014
|
| 11 months ago | geb7 | glucan endo-1,3-beta-glucosidase7 : | 1.09 | GRMZM2G046101
| | | Gene Product: September 1st, 2003
Variation: October 7th, 2016
Gene Model: October 7th, 2016
|
| 11 months ago | cesa10 | cellulose synthase10: gene exhibits coexpression with the genes cesa11 and cesa12. | 1.08 | GRMZM2G445905
| Appenzeller, L, et al. 2004. 11:287-299 | | Reference: January 24th, 2007
Gene Product: October 7th, 2016
Gene Model: July 22nd, 2015
|
| 11 months ago | cesa11 | cellulose synthase 11: coordinately expressed with loci cesa10 and cesa12 | 3.07 | GRMZM2G055795
| Appenzeller, L, et al. 2004. 11:287-299 | | Reference: January 24th, 2007
Gene Product: October 7th, 2016
Gene Model: July 22nd, 2015
|
| 11 months ago | cesa12 | cellulose synthase 12: coordinately expressed with cesa10 and cesa11 | 7.02 | GRMZM2G142898
| Appenzeller, L, et al. 2004. 11:287-299 | | Reference: January 24th, 2007
Gene Product: October 7th, 2016
Gene Model: July 22nd, 2015
|
| 11 months ago | umc1278 | : putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C per NCBI | 1.07 | GRMZM2G092595
| | | Variation: September 1st, 2003
Gene Model: October 6th, 2016
|
| 11 months ago | asg3 | : NCBI identifies as "putative protein kinase superfamily protein" | 1.04 | GRMZM2G453438
| Grant, D et al. 1993. MNL 67:55-61 | | Reference: September 1st, 2003
Variation: October 5th, 2016
Gene Model: October 5th, 2016
|
| 11 months ago | umc1254 | : | 1.04 | GRMZM2G045135
| | | Variation: October 4th, 2016
Gene Model: October 4th, 2016
|
| 11 months ago | mop1 | mediator of paramutation1: recessive changes B' phenotype to dark, similar to B1-I | 2.04 | GRMZM2G042443
| Huang, J et al. 2016. International Review of Cell and Molecular Biology. doi: 10.1016/bs.ircmb.2016.08.002 | | Reference: October 3rd, 2016
Gene Product: August 8th, 2006
Variation: August 8th, 2006
Gene Model: April 24th, 2013
Recommended by Ed Coe:
January 8th, 2008
|
| 11 months ago | lpa2 | low phytic acid2: low phytic acid | 1.05 | GRMZM2G456626
| Kumar, SS et al. 2015. Annals of Plant and Soil Research 17:99-102 | | Reference: October 3rd, 2016
Gene Product: April 22nd, 2013
Variation: April 22nd, 2013
Gene Model: April 23rd, 2013
Recommended by Ed Coe:
January 8th, 2008
|
| 11 months ago | nrpd2/e2 | nuclear RNA polymerase D2/E2: This gene was found by both the Chandler Lab (as mop2) and the Hollick lab (as rmr7). | 2.02 | GRMZM2G054225
| Huang, J et al. 2016. International Review of Cell and Molecular Biology. doi: 10.1016/bs.ircmb.2016.08.002 | | Reference: October 3rd, 2016
Gene Product: November 9th, 2012
Variation: November 3rd, 2012
Gene Model: November 9th, 2012
|
| 11 months ago | ufo1 | unstable factor for orange1: dominant Ufo1 plants have orange color in anthers, silks, and most other plant parts in presence of P1-wr or P1-rr; growth retarded | 10.03 | | Huang, J et al. 2016. International Review of Cell and Molecular Biology. doi: 10.1016/bs.ircmb.2016.08.002 | | Reference: October 3rd, 2016
Variation: October 5th, 2012
|
| 11 months ago | rmr1 | required to maintain repression1: | 6.07 | | Huang, J et al. 2016. International Review of Cell and Molecular Biology. doi: 10.1016/bs.ircmb.2016.08.002 | | Reference: October 3rd, 2016
Gene Product: April 30th, 2008
Variation: May 10th, 2013
|
| 11 months ago | tgr1 | transgene reactivated1: | | | Huang, J et al. 2016. International Review of Cell and Molecular Biology. doi: 10.1016/bs.ircmb.2016.08.002 | | Reference: October 3rd, 2016
Variation: December 23rd, 2014
|
| 11 months ago | umc1243 | : similar to Arabidopsis peroxidase 3 | 1.05 - 1.05 | GRMZM2G085198
| | | Variation: September 30th, 2016
Gene Model: October 1st, 2016
|
| 11 months ago | umc1245 | : | 1.07 | GRMZM2G113781
| | | Variation: September 1st, 2003
Gene Model: September 30th, 2016
|
| 11 months ago | ga2 | gametophyte factor2: Ga2 pollen grains are competitively superior to ga2 on Ga2 silks. | 5.04 | | Lu, Y et al. 2014. Plant Reproduction 27:19-20 | | Reference: December 18th, 2014
Variation: September 29th, 2016
|
| 11 months ago | mis12a | minichromosome instability12a: encodes a core kinetochore protein required in meiosis I | 10.07 | GRMZM2G173660
| Koo, DH; Zhao, H; Jiang, JM. 2016. Chromosome Res. 0:10.1007/s10577-016-9537-5 | AT5G35520 (TAIR)
LOC_Os02g40680 (MSU/TIGR)
LOC_Os02g40680 (Gramene) | Reference: September 29th, 2016
Gene Product: December 24th, 2015
Variation: October 16th, 2010
Gene Model: December 24th, 2015
|
| 11 months ago | o10 | opaque endosperm10: like o1 | | GRMZM2G346263
| Yao, DS, et al. 2016. PLoS Genetics. 12:e1006270 | | Reference: September 29th, 2016
Gene Product: August 20th, 2016
Variation: August 20th, 2016
Gene Model: August 20th, 2016
|
| 11 months ago | iaa5 | Aux/IAA-transcription factor5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. | 1.11 | GRMZM5G809195
| Yilmaz, A et al. 2009. Plant Physiol 149:171-180 | | Reference: May 12th, 2011
Variation: September 28th, 2016
Gene Model: September 29th, 2016
|
| 11 months ago | umc1200 | : | 1.00 | GRMZM2G127635
| | | Variation: September 29th, 2016
Gene Model: September 29th, 2016
|
| 11 months ago | umc1222 | : | 1.01 - 1.02 | GRMZM2G056870
| | | Variation: September 29th, 2016
Gene Model: September 29th, 2016
|
| 11 months ago | umc1147 | : Similar to Monocopper oxidase-like protein SKU5 of Arabidopsis C-terminal peptide-binding protein 1 | 1.07 | GRMZM2G438386
| Shimomura, S. 2006. Plant Mol Biol 60:663-677 | | Reference: September 28th, 2016
Variation: September 28th, 2016
Gene Model: September 28th, 2016
|
| 11 months ago | umc115 | : | 1.02 |
