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CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The most recent updates can be found on our curation site or by clicking the Most Recent Data option in the menu below.


         Recommended Genes


Most recent data | Six months | One year | All time

New or updated genes since one year ago. The cutoff date is November 24th, 2019

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdayts6 tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement.
1.11
GRMZM5G862109
Hu, XJ et al. 2020. Crop J doi: 10.1016/j.cj.2020.09.003     Reference: November 23rd, 2020
Gene Product: July 5th, 2019
Variation: December 4th, 2013
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
yesterdayss6 starch synthase6:
5.03
   Hu, XJ et al. 2020. Crop J doi: 10.1016/j.cj.2020.09.003     Reference: November 23rd, 2020
Gene Product: October 14th, 2016
yesterdayask2 aspartate kinase2:
2.06
GRMZM2G052935
Hu, XJ et al. 2020. Crop J doi: 10.1016/j.cj.2020.09.003     Reference: November 23rd, 2020
Gene Product: September 1st, 2003
Variation: February 6th, 2018
Gene Model: February 6th, 2018
yesterdaybhlh51 bHLH-transcription factor 51: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.mutant is male sterile
 
   Shi, Z et al. 2020. Crop J doi: 10.1016/j.cj.2020.09.007     Reference: November 23rd, 2020
Gene Product: September 14th, 2016
Variation: November 23rd, 2020
yesterdaysus1 sucrose synthase1: (was sus2, css1) sucrose synthase-1 (SUS1) of embryo and other tissues, compare sh1; SSRs phi016, 032, 042
9.04
GRMZM2G152908
Hu, XJ et al. 2020. Crop J doi: 10.1016/j.cj.2020.09.003     Reference: November 23rd, 2020
Gene Product: October 25th, 2006
Variation: February 1st, 2020
Gene Model: August 12th, 2014
yesterdaypx14 peroxidase14:
2.03
GRMZM2G108219
Hofmann, A et al. 2020. Int J Mol Sci 21:8872     Reference: November 23rd, 2020
Gene Product: September 18th, 2015
Variation: February 22nd, 2015
Gene Model: February 23rd, 2015
yesterdaypox3 guaiacol peroxidase3:
6.05
GRMZM2G135108
Hofmann, A et al. 2020. Int J Mol Sci 21:8872     Reference: November 23rd, 2020
Gene Product: September 1st, 2003
Variation: January 7th, 2016
Gene Model: February 9th, 2015
yesterdaypox1 guaiacol peroxidase1:
 
GRMZM2G104394
Hofmann, A et al. 2020. Int J Mol Sci 21:8872     Reference: November 23rd, 2020
Gene Product: September 1st, 2003
Gene Model: February 9th, 2015
yesterdayago4a argonaute4a:
 
GRMZM2G589579
Hu, XJ et al. 2020. Crop J doi: 10.1016/j.cj.2020.09.003     Reference: November 23rd, 2020
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
yesterdaypx15 peroxidase15: expression enhanced by Mg application
 
GRMZM2G108123
Hofmann, A et al. 2020. Int J Mol Sci 21:8872     Reference: November 23rd, 2020
Gene Product: September 18th, 2015
Gene Model: June 22nd, 2020
yesterdaypx16 peroxidase16:
 
GRMZM2G025441
Hofmann, A et al. 2020. Int J Mol Sci 21:8872     Reference: November 23rd, 2020
Gene Product: September 18th, 2015
Gene Model: July 9th, 2020
yesterdaypx18 peroxidase18:
 
GRMZM2G108153
Hofmann, A et al. 2020. Int J Mol Sci 21:8872     Reference: November 23rd, 2020
Gene Product: September 18th, 2015
Gene Model: November 23rd, 2020
3 days agocat3 catalase3: electrophoretic mobility, null allele is known; mitochondrial; tetrameric, intralocus hybrid bands occur; SSRs phi006, phi019, phi076, umc1197
4.11
   Wang, Y et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13956     Reference: November 21st, 2020
Gene Product: September 1st, 2003
Variation: March 2nd, 2007
3 days agoapx1 ascorbate peroxidase homolog:
9.04
GRMZM2G054300
Wang, Y et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13956     Reference: November 21st, 2020
Gene Product: October 15th, 2020
Variation: August 10th, 2012
Gene Model: June 19th, 2013
3 days agopx13 peroxidase 13:
5.03
GRMZM2G134947
Wang, Y et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13956     Reference: November 21st, 2020
Gene Product: September 18th, 2015
Variation: September 1st, 2003
Gene Model: February 23rd, 2015
3 days agonpf2 nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein
 
GRMZM2G161459
Wang, Y et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13956   AT1G12110 (TAIR) Reference: November 21st, 2020
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
3 days agonope1 no perception1 : mutant is defective in early rhizosphere signalling
 
GRMZM2G176737
Paszkowski, U et al. 2006. Plant J 47:165-173   LOC_Os04g01520 (MSU/TIGR) Reference: November 20th, 2020
Gene Product: September 7th, 2020
Variation: November 21st, 2020
Gene Model: September 7th, 2020
3 days agotaci1 taciturn1: mutant exhibited reduced and patchy pigmentation, which was reflected by a decreased level of average root colonization
 
   Paszkowski, U et al. 2006. Plant J 47:165-173     Reference: November 20th, 2020
Variation: November 21st, 2020
3 days agopram1 precocious arbuscular mycorrhiza1: plants carrying the dominant mutant were distinguished by their homogenous and intense yellow root system displaying a more pronounced pigment accumulation
 
   Paszkowski, U et al. 2006. Plant J 47:165-173     Reference: November 20th, 2020
Variation: November 21st, 2020
3 days agoaer1 alkenal reductase1: Overexpression improves low-nitrogen tolerance
 
GRMZM2G080650
Wang, Y et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13956     Reference: November 21st, 2020
Gene Product: November 21st, 2020
Gene Model: November 21st, 2020
3 days agopx5 peroxidase 5: cathodal, presence-absence; expressed in all tissues except pollen; insect resistance
6.05
GRMZM2G450233
Wang, Y et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13956     Reference: November 21st, 2020
Gene Product: September 18th, 2015
Gene Model: December 30th, 2015
4 days agoa1 anthocyaninless1: colorless aleurone, green or brown plant; brown pericarp with P1-rr
3.09
   Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: April 11th, 2013
Variation: August 25th, 2010
4 days agoa2 anthocyaninless2: like a1, but red pericarp with P1-rr
5.03
   Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: June 7th, 2012
Variation: September 1st, 2003
4 days agoc2 colorless2: colorless aleurone, reduced plant and cob color; C2-Idf dominant inhibitor; duplicate factor with whp1 for pollen color and for anthocyanins
4.08
   Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: September 1st, 2003
Variation: November 14th, 2013
4 days agopl1 purple plant1: Pl1 plant tissues have light-independent pigment, pl1 blue light-dependent; Pl1-Bh1, colored patches in c1 aleurone and in plant; transcriptional activator for flavonoid genes; SSR phi031, nc009, nc010. umc1014
6.04
   Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: June 16th, 2015
Variation: March 28th, 2013
4 days agopr1 red aleurone1: changes purple aleurone to red; encodes flavonoid 3'-hydroxylase
5.05
GRMZM2G025832
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: June 20th, 2018
Variation: June 10th, 2011
Gene Model: September 22nd, 2011
4 days agor1 colored1: regulates anthocyanin pathway; dominant R1 (S element) confers function in aleurone; dominants represented by R1-r or r1-r (P element) confer function in anthers, leaf tip, brace roots, etc.
10.06
   Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: October 13th, 2010
Variation: January 6th, 2018
4 days agowhp1 white pollen1: duplicate factor with c2 for pollen color and for anthocyanins
2.08
   Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: September 1st, 2003
Variation: August 24th, 2013
4 days agoccamk1 calcium/calmodulin dependent protein kinase1: involved in ABA signaling (Ma et al 2012)
 
GRMZM2G062772
Paszkowski, U et al. 2006. Plant J 47:165-173     Reference: November 20th, 2020
Gene Product: December 3rd, 2013
Variation: July 7th, 2017
Gene Model: April 23rd, 2013
4 days agoelfa9 elongation factor 1-alpha9: shares 89-99% nucleotide sequence identity with genes elf1a to alf1g (aka clones eEF1Aa to eEF1Ag).
9.03
GRMZM2G153541
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: September 1st, 2003
Variation: April 14th, 2014
Gene Model: April 15th, 2014
4 days agoa4 anthocyaninless4: homolog/duplicate of a1, with differences at 59 positions, including deletions; mRNA expressed in tissues analyzed-cob, husks, kernel; function of gene product not known (Bernhardt et al. 1998)
8.06
   Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Variation: August 30th, 2013
4 days agochi3 chalcone flavanone isomerase3: Similar to chi1; expressed in various tissues, but not root, embryo, or internode (Sekhon et al 2011)
5.00
GRMZM2G119186
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: May 8th, 2012
Variation: May 13th, 2012
Gene Model: May 9th, 2012
4 days agochi1 chalcone flavanone isomerase1: genomic sequence, gene-specific probe, transcript defined by S1-nuclease protection analysis
1.11
GRMZM2G155329
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: May 8th, 2012
Variation: October 10th, 2012
Gene Model: May 9th, 2012
4 days agofht1 flavanone 3-hydroxylase1: (aka f3h) single copy cDNA similar to Antirrhinum homologsimilar to Naringenin,2-oxoglutarate 3-dioxygenase of A. thaliana
2.01 - 2.02
   Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: June 8th, 2012
Variation: September 1st, 2003
4 days agopac1 pale aleurone color1: recessive, non-lethal, regulates reduced pigment in kernels
5.06
GRMZM2G058432
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Variation: February 23rd, 2013
Gene Model: July 11th, 2018
4 days agofls1 flavonol synthase1: partially complements the flavonol deficiency of the Arabidopsis fls1 mutant
 
GRMZM2G152801
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: October 10th, 2012
Variation: October 9th, 2012
Gene Model: October 9th, 2012
4 days agosro5 similar to RCD one5: over-expression in transgenic Arabidopsis enhances abiotic stress resistance
 
GRMZM2G145236
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083   AT1G32230 (TAIR) Reference: November 20th, 2020
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
4 days agosro2 similar to RCD one2:
 
GRMZM5G866843
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: September 7th, 2018
Variation: February 13th, 2019
Gene Model: August 10th, 2018
4 days agosro3 similar to RCD one3:
 
GRMZM2G011469
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
4 days agosro1 similar to RCD one1: Involved in increased the sensitivity of the plant to abiotic stress, while repressing anthocyanin biosynthesis and ROS scavenging activity
 
GRMZM2G122543
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: September 7th, 2018
Variation: November 20th, 2020
Gene Model: August 10th, 2018
4 days agosro6 similar to RCD one6:
 
GRMZM2G177878
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
4 days agocast1 castor-like1: mutants are resistant to arbuscular mycorrhizal fungi infection
 
GRMZM2G099160
Ramirez Flores, MR et al. 2020. Elife 9:e61701     Reference: November 20th, 2020
Gene Product: November 20th, 2020
Variation: November 20th, 2020
Gene Model: November 20th, 2020
4 days agopoll1 pollux-like1: encodes a nuclear ion-channel protein
 
GRMZM2G110897
Ramirez Flores, MR et al. 2020. Elife 9:e61701     Reference: November 20th, 2020
Gene Product: November 20th, 2020
Gene Model: November 20th, 2020
4 days agosymrk1 symbiosis receptor-like kinase-like1:
 
GRMZM2G700291
Paszkowski, U et al. 2006. Plant J 47:165-173     Reference: November 20th, 2020
Gene Product: July 10th, 2019
Gene Model: November 20th, 2020
4 days agoufgt4 UDP-flavonol-glycosyltransferase4:
 
GRMZM2G015709
Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: July 4th, 2018
Gene Model: November 20th, 2020
4 days agosro4 similar to RCD one4:
5.00
   Qin, LM et al. 2020. Plant J pp.doi: 10.1111/tpj.15083     Reference: November 20th, 2020
Gene Product: September 7th, 2018
Variation: September 25th, 2007
5 days agofdx2 ferredoxin2: encoded protein sequence distinct from fdx1; leaf cDNA, SSRs umc1002, umc1023
6.00
GRMZM2G048313
Sun, FA et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa544     Reference: November 19th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2016
6 days agocgt1 C-glucosyl transferase1: involved in C-glucosylation of 2-hydroxyflavanone aglycone
 
GRMZM2G162783
Wang, Z-L et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2012745117     Reference: November 18th, 2020
Gene Product: September 24th, 2018
Gene Model: September 24th, 2018
6 days agoprh25 protein phosphatase homolog25: expression in both shoot and root was significantly inhibited by drought stress
 
AC208201.3_FG002
Lu, FZ et al. 2020. Physiology and Molecular Biology of Plants pp.doi: 10.1007/s12298-020-00910-2     Reference: November 18th, 2020
Gene Product: September 1st, 2003
Gene Model: November 18th, 2020
6 days agocgt2 C-glucosyl transferase2: involved in C-arabinosylation of mono-C-glucoside
6.05
   Wang, Z-L et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2012745117     Reference: November 18th, 2020
Gene Product: November 18th, 2020
Variation: September 25th, 2007
7 days agobm1 brown midrib1: brown pigment over vascular bundles of leaf sheath, midrib, and blade, especially evident on the midribs of healthy leaves at flowering; lignin content at maturity 86% of normal; encodes cinnamyl alcohol dehydrogenase
5.04
   Xiong, WD et al. 2020. Frontiers Plant Sci 11:594798     Reference: November 17th, 2020
Gene Product: September 1st, 2003
Variation: November 17th, 2020
8 days agomybr96 MYB-related-transcription factor 96: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
   Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Variation: September 25th, 2007
8 days agolox3 lipoxygenase3:
3.06
   Pathi, KM et al. 2020. Frontiers Plant Sci 11:543895     Reference: November 16th, 2020
Gene Product: January 3rd, 2018
Variation: November 16th, 2020
8 days agohsftf17 HSF-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: May 15th, 2020
8 days agohsftf18 HSF-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: May 15th, 2020
8 days agohsftf24 HSF-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: May 15th, 2020
8 days agohsftf7 HSF-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor B-2b of A. thaliana
 
   Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: May 15th, 2020
8 days agohsftf8 HSF-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. similar to heat stress transcription factor B-2b of A. thaliana
 
   Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: May 15th, 2020
8 days agotcptf26 TCP-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: September 27th, 2019
8 days agophp20075b(ext)  : similar to Arabidopsis putative gibberellin-regulated protein
9.03
GRMZM2G105364
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Variation: September 1st, 2003
Gene Model: January 9th, 2019
8 days agockx6 cytokinin oxidase6:
1.08
GRMZM2G404443
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: April 4th, 2014
Gene Model: January 27th, 2017
8 days agohsp90 heat shock protein, 90 kDa: heat-induced; encoded protein interacts with HSP101
10.04
GRMZM5G833699
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: January 14th, 2019
Variation: September 1st, 2003
Gene Model: November 3rd, 2014
8 days agohsp26 heat shock protein26: was umc195; cDNA, single mRNA species induced by heat shock, in vitro HSP26 imported by isolated chloroplasts, cross-reacts with anti-pea-chloroplast-HSP21 antibodies
1.03
GRMZM2G149647
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: September 1st, 2003
Variation: January 30th, 2015
Gene Model: January 30th, 2015
8 days agohsp18c heat shock protein18c: induced by heat shock specifically in anthers or spikelets containing meiotic microsporocytes
8.02
   Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: September 1st, 2003
Variation: January 2nd, 2013
8 days agockx12 cytokinin oxidase12:
 
GRMZM2G008792
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: April 4th, 2014
Gene Model: March 25th, 2014
8 days agocko4b cytokinin oxidase4b:
 
GRMZM2G024476
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: April 4th, 2014
Gene Model: April 4th, 2014
8 days agoga2ox7 gibberellin 2-oxidase7:
 
GRMZM2G427618
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
8 days agoaos3 allene oxide synthesis3:
 
GRMZM2G376661
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
8 days agohsp12 heat shock protein12:
 
GRMZM2G158232
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
8 days agoaas11 auxin amido synthetase11: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G162413
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
8 days agoabh4 abscisic acid 8'-hydroxylase4:
7.02
GRMZM2G065928
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: February 15th, 2013
Variation: March 31st, 2005
Gene Model: July 7th, 2017
8 days agogols3 galactinol synthase3: Expressed late in seed developmentExpressed during post-imbibition dehydration stress
9.04
GRMZM5G872256
Wang, H-Q et al. 2020. Frontiers Plant Sci 11:533046     Reference: November 16th, 2020
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
11 days agofea2 fasciated ear2: ear fasciated, broadened and flattened at the tip; rows irregular; similar to CLAVATA 2 of Arabidopsis thaliana
4.05
   Trung, KH et al. 2020. Agronomy 10: doi: 10.3390/agronomy10111774     Reference: November 13th, 2020
Gene Product: July 10th, 2019
Variation: November 13th, 2020
12 days agogln6 glutamine synthetase6: cytosolic GS1-1 isoform, gene specific cDNA probe, 6-member nuclear gene family
1.02 - 1.03
GRMZM2G050514
Li, XL et al. 2020. Agron J pp.doi: 10.1002/agj2.20502     Reference: November 12th, 2020
Gene Product: September 1st, 2003
Variation: December 7th, 2012
Gene Model: August 7th, 2014
12 days agonnr1 nitrate reductase(NADH)1: leaf, scutellum cDNA's; flavin and cyt b domains functional in E. coli, may be allelic to nnr3
4.05
   Li, XL et al. 2020. Agron J pp.doi: 10.1002/agj2.20502     Reference: November 12th, 2020
Gene Product: September 1st, 2003
Variation: October 26th, 2010
12 days agogln2 glutamine synthetase2: cytosolic, GS1-2 isoform, root specific, gene specific cDNA probe, 6-member nuclear gene family; contary to preceding notes, Rastogi et. al., 1998 Plant Cell Phyol. 39:443-446, observed gln2 trancripts primarily in the pedicels but at undetectable levels in roots (TM).
1.09
   Li, XL et al. 2020. Agron J pp.doi: 10.1002/agj2.20502     Reference: November 12th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
12 days agogln3 glutamine synthetase3: cytosolic GS1-5 isoform, a major species in root; gene specific cDNA probe, 6-member nuclear gene family
9.06
   Li, XL et al. 2020. Agron J pp.doi: 10.1002/agj2.20502     Reference: November 12th, 2020
Gene Product: September 1st, 2003
Variation: December 7th, 2012
12 days agogln4 glutamine synthetase4: cytosolic GS1-3 isoform, major species in both root and leaf, gene specific cDNA probes, 6-member nuclear gene family; SSR phi085
5.06
   Li, XL et al. 2020. Agron J pp.doi: 10.1002/agj2.20502     Reference: November 12th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
12 days agogln5 glutamine synthetase5: cytosolic GS1-4 isoform, major species in both leaf and root, gene specific cDNA probe, 6-member nuclear gene family
4.06
   Li, XL et al. 2020. Agron J pp.doi: 10.1002/agj2.20502     Reference: November 12th, 2020
Gene Product: September 1st, 2003
Variation: May 30th, 2014
12 days agogln1 glutamine synthetase1: chloroplast, gene specific cDNA probe, GS2 isoform; 6-member nuclear gene family
10.07
   Li, XL et al. 2020. Agron J pp.doi: 10.1002/agj2.20502     Reference: November 12th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
13 days agobk4 brittle stalk4: mutants have a brittle stalk phenotype
7.03
   Wang, XQ et al. 2020. BMC Plant Biology 20:515     Reference: November 11th, 2020
Gene Product: September 1st, 2003
Variation: September 7th, 2019
13 days agobk2 brittle stalk2: brittle plant parts after 4-leaf stage
9.04 - 9.05
GRMZM2G109326
Wang, XQ et al. 2020. BMC Plant Biology 20:515     Reference: November 11th, 2020
Gene Product: March 6th, 2012
Variation: March 6th, 2012
Gene Model: March 5th, 2012
13 days agobm4 brown midrib4: mutant looks like bm1; encodes folylpolyglutamate synthetase
9.08
GRMZM2G393334
He, CM et al. 2020. Frontiers Plant Sci 11:579120     Reference: November 11th, 2020
Gene Product: December 17th, 2014
Variation: December 17th, 2014
Gene Model: December 17th, 2014
13 days agotd1 thick tassel dwarf1: shortened plants, fasciated ears, increased spikelet density in tassel
5.03
GRMZM2G300133
He, CM et al. 2020. Frontiers Plant Sci 11:579120     Reference: November 11th, 2020
Gene Product: October 22nd, 2012
Variation: October 23rd, 2012
Gene Model: October 22nd, 2012
13 days agorlk7 receptor-like protein kinase7: highly expressed in embryos prior to programmed cell death (PCD) of starchy endosperm tissues, and its encoded protein has been localized to both plasm and nuclear membranes subcellularly.
 
GRMZM2G149051
He, CM et al. 2020. Frontiers Plant Sci 11:579120   LOC_Os09g30190 (MSU/TIGR) Reference: November 11th, 2020
Gene Product: July 10th, 2019
Gene Model: November 11th, 2020
13 days agorlk2 receptor-like protein kinase2:
 
GRMZM2G039431
He, CM et al. 2020. Frontiers Plant Sci 11:579120     Reference: November 11th, 2020
Gene Product: July 10th, 2019
Gene Model: November 11th, 2020
13 days agorlk3 receptor-like protein kinase3:
 
GRMZM2G463493
He, CM et al. 2020. Frontiers Plant Sci 11:579120     Reference: November 11th, 2020
Gene Product: July 10th, 2019
Gene Model: November 11th, 2020
13 days agorlk4 receptor-like protein kinase4:
 
GRMZM2G131609
He, CM et al. 2020. Frontiers Plant Sci 11:579120     Reference: November 11th, 2020
Gene Product: July 10th, 2019
Gene Model: November 11th, 2020
13 days agorlk5 receptor-like protein kinase5: closest paralog to rlk7
 
AC233861.1_FG001
He, CM et al. 2020. Frontiers Plant Sci 11:579120     Reference: November 11th, 2020
Gene Product: July 10th, 2019
Gene Model: November 11th, 2020
14 days agoccs1 C-type cytochrome synthesis protein1: Ortholog of CCS1. Required for cytb6f assembly. (A. Barkan, 2015)ortholog of Arabidopsis CCS1. Required for cytb6f assembly
1.10
GRMZM2G038301
Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016     Reference: December 1st, 2015
Variation: November 10th, 2020
Gene Model: October 12th, 2017
14 days agopsa1 photosystemI1: Required for PSI accumulation. Harbors NifU domain implicated in Fe-S cluster assembly. Ortholog of Arabidopsis Nfu-IVa. (A. Barkan, 2015)lacks photosystem I core complex polypeptides; harbors NifU domain implicated in Fe-S cluster assemblyNCBI: NFU3 NifU-like protein 3
6.02
GRMZM2G100976
Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016     Reference: December 1st, 2015
Variation: November 10th, 2020
Gene Model: April 4th, 2017
14 days agoera1 E. coli Ras-like protein1: Ortholog of Arabidopsis ERA1. Note that there are two unrelated Arabidopsis genes with this name. Required for cp ribosome accumulation. Putative chloroplast ribosome assembly factor. ERA domain (IPR005662). (A. Barkan, 2015)Ortholog of Arabidopsis ERA1. Required for cp ribosome accumulation. Putative cp ribosome assembly factor. ERA domain (IPR005662).
8.03 - 8.03
GRMZM2G158024
Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016     Reference: December 1st, 2015
Variation: November 10th, 2020
Gene Model: February 17th, 2015
14 days agorh4 RNA helicase4: Chloroplast Dead box family RNA helicase. Promotes chloroplast group II intron splicing and assembly of the 50S ribosomal subunit. Associates in vivo with pre-50S ribosomal subunits and with a subset of group II introns. (A. Barkan, 2015)cp Dead box RNA helicase involved in cp intron splicing and assembly of the 50S ribosomal subunit
 
AC198418.3_FG005
Zhang, HS et al. 2020. Plant Genome 13:e20022   At5g26742 (TAIR)
LOC_Os03g61220 (MSU/TIGR)
Os03g0827700 (Gramene)
Reference: October 5th, 2020
Gene Product: May 17th, 2012
Variation: November 10th, 2020
Gene Model: May 17th, 2012
14 days agoycf54 ycf54 homolog: Ortholog of barley/cyanobacterial Ycf54; subunit of Mg-protoporphyrin IX monomethyl ester cyclase. (A. Barkan, 2015)reduced levels of major light harvesting chlorophyll a/b binding proteins; ortholog of barley/cyanobacterial Ycf54, a subunit of Mg-protoporphyrin IX monomethyl ester cyclase
1.04
GRMZM2G010196
Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016     Reference: December 1st, 2015
Variation: November 10th, 2020
Gene Model: February 17th, 2015
14 days agohcf148 high chlorophyll fluorescence148: Ortholog of Arabidopsis Y3IP1. PSI assembly factor, cooperates with Ycf3. (A. Barkan, 2015)mutants lack photosystem I, pale green seedling lethal; the Arabidopsis ortholog, Y3IP1, is a PSI assembly factor and cooperates with Ycf3
3.06
GRMZM2G002165
Shen, J et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.00524     Reference: May 20th, 2017
Variation: November 10th, 2020
Gene Model: February 17th, 2015
14 days agoprda1 pep-related development arrested1 homolog: Ortholog of Arabidopsis PRDA1. Chloroplast nucleoid protein. Required for transcription by the plastid-encoded polymerase (PEP). (A. Barkan, 2015) ortholog of Arabidopsis PRDA1, a cp nucleoid protein involved in PEP- mediated transcription; cpRNA defects in maize similar to other PEP-deficient mutants
 
GRMZM2G079452
Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016   AT5G48470 (TAIR)
LOC_Os11g23790 (MSU/TIGR)
Reference: December 1st, 2015
Variation: November 10th, 2020
Gene Model: February 17th, 2015
14 days agotab2 translation chloroplast psaB mRNA2 homolog: Ortholog of ATAB2 in Arabidopsis and TAB2 in Chlamydomonas. Required for Photosystem I accumulation but is not necessary for synthesis of plastid-encoded PSI subunits in maize. (A. Barkan, 2015)required for photosystem I accumulation; ortholog of ATAB2 in Arabidopsis and TAB2 in Chlamydomonas where it activates translation of cp psaB RNA in Chlamydomonas but not in maize.
 
GRMZM2G081955
Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016     Reference: December 1st, 2015
Variation: November 10th, 2020
Gene Model: February 17th, 2015
15 days agocyc4 cyclin4:
8.08
GRMZM2G310115
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: June 26th, 2009
Variation: January 17th, 2014
Gene Model: November 5th, 2014
15 days agorgd1 ragged seedling1: (aka lbl1) seedling leaves narrow, thread-like, have difficulty in emerging; low temperature enhances expression
6.01 - 6.01
   Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033   AT5G23570 (TAIR) Reference: November 9th, 2020
Gene Product: December 18th, 2014
Variation: June 8th, 2015
15 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Reneau, JW et al. 2020. Plant Direct doi: 10.1002/pld3.284   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: November 9th, 2020
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
15 days agoarftf11 ARF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Variation: July 7th, 2017
15 days agoarftf23 ARF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Variation: July 7th, 2017
15 days agoarftf26 ARF-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Variation: July 7th, 2017
15 days agocyc13 cyclin13:
4.07
GRMZM2G075117
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: June 26th, 2009
Variation: March 15th, 2017
Gene Model: March 15th, 2017
15 days agorld1 rolled leaf1: in dominant Rld1 plants, leaves are tightly rolled and tend to be entangled; ligular flaps on abaxial surface of leaf; resembles Ce1
9.07 - 9.08
   Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: October 6th, 2015
Variation: June 30th, 2012
15 days agoaic1 auxin import carrier1: cDNA encoding a protein with a deduced amino acid showing 73% identity to AtAUX1.
1.05
GRMZM2G129413
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033   AT2G21050 (TAIR) Reference: November 9th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 21st, 2015
15 days agoipt5 isopentenyl transferase5: encodes an isopentenyl transferase
5.01
AC210013.4_FG005
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: March 19th, 2014
Variation: September 1st, 2003
Gene Model: March 23rd, 2017
15 days agocyc14 cyclin14: NCBI: cyclin-D4-2-like
1.07
GRMZM2G133413
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: June 26th, 2009
Variation: January 19th, 2017
Gene Model: January 19th, 2017
15 days agoAY110352  :
3.05
GRMZM2G163514
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033   AT5G23570 (TAIR) Reference: November 9th, 2020
Variation: July 29th, 2004
Gene Model: March 20th, 2018
15 days agoaic3 auxin import carrier3: part of gene family that maintains auxin distribution pattern against environmental or developmental influences
1.03
GRMZM2G149481
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: April 19th, 2017
Gene Model: April 19th, 2017
15 days agorld2 rolled leaf2: paralogous locus of rld1
1.01
GRMZM2G042250
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: October 6th, 2015
Variation: January 18th, 2010
Gene Model: October 6th, 2015
15 days agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
GRMZM2G091819
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
15 days agoyuc2 Yucca2:
 
GRMZM2G159393
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: June 18th, 2018
Gene Model: September 12th, 2012
15 days agoyuc3 Yucca3: Function of 109945481 is defined as "probable indole-3-pyruvate monooxygenase YUCCA10?? (EHC Jul 2019)
 
GRMZM2G107761
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: June 18th, 2018
Gene Model: September 12th, 2012
15 days agopin7 PIN-formed protein7: simlar to Arabidopsis PIN5 (Forestan et al 2012)
 
GRMZM2G148648
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
15 days agopin4 PIN-formed protein4: auxin efflux carriter similar to Arabidopsis PIN1 (Forestan et al 2012), but from PIN clade not found in all flowering plants save for the Brassicacease (O'Connor 2014 et al
4.08
GRMZM2G171702
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
15 days agoipt7 isopentenyl transferase7: encodes an isopentenyl transferase
 
GRMZM2G436770
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: March 19th, 2014
Gene Model: July 10th, 2013
15 days agoipt3 isopentenyl transferase3: encodes an isopentenyl transferase
 
GRMZM2G393014
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: March 19th, 2014
Gene Model: July 11th, 2013
15 days agocyc11 cyclin11: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity.
 
GRMZM2G161382
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: June 26th, 2009
Gene Model: December 21st, 2016
15 days agoexpa7 alpha expansin7:
 
GRMZM2G127029
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: March 12th, 2008
Gene Model: November 9th, 2020
15 days agopin2 PIN-formed protein2: see pin1
5.06
GRMZM2G074267
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: April 21st, 2014
Variation: June 11th, 2007
Gene Model: June 7th, 2012
15 days agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
GRMZM2G398650
Gautam, V et al. 2020. Development pp.doi: 10.1242/dev.190033     Reference: November 9th, 2020
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: June 7th, 2012
16 days agorrb3 retinoblastoma family3:
 
GRMZM2G033828
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Variation: January 26th, 2011
Gene Model: April 17th, 2015
16 days agohat1 histone acetyltransferase1: cDNA, genomic and peptide sequence; antibody cross-reactivity
7.02
GRMZM5G851405
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: September 1st, 2003
Variation: January 28th, 2009
Gene Model: June 3rd, 2017
16 days agorrb2 related to retinoblastoma2: alternatively spliced cDNAs, ubiquitous, see rrb1
4.08
   Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: September 1st, 2003
Variation: April 17th, 2015
16 days agocki1 cyclin-dependent kinase inhibitor1:
1.08
GRMZM2G116885
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: March 8th, 2017
Variation: December 6th, 2016
Gene Model: December 6th, 2016
16 days agowee1 wee1: cDNA single copy, deduced protein 50% identity to protein kinase domain of human Wee1; SSR umc1255
4.11
GRMZM5G878541
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Variation: March 21st, 2017
Gene Model: March 17th, 2017
16 days agocdc2 cell division control protein homolog2: cDNA sequence homologous to cdc2/cdc28 subfamily of serine/threonine protein kinases, complements yeast cdc28
1.01
GRMZM2G008327
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: December 29th, 2016
Variation: April 23rd, 2010
Gene Model: March 30th, 2015
16 days agorrb1 related to retinoblastoma1: nuclear, low copy, ubiquitous expression; phosphorylation dependent role in cell division
2.09
   Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: September 1st, 2003
Variation: May 19th, 2005
16 days agocyc3 cyclin3: classIII; sense RNA functions in Xenopus oocytes; SSR umc1186
6.02
   Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Variation: January 17th, 2014
16 days agocyc1 cyclin1: classI; sense RNA functions in Xenopus oocytes
8.05
   Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Variation: September 25th, 2007
16 days agohag101 histone acetyl transferase GNAT/MYST 101: single copy; enzyme activity confirmed by assay of recombinant protein
5.03
GRMZM2G046021
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: January 4th, 2018
Variation: December 14th, 2012
Gene Model: July 27th, 2016
16 days agocdc3 cell division control protein homolog3:
3.10
GRMZM2G495626
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: December 29th, 2016
Gene Model: December 21st, 2018
16 days agocyc6 cyclin6:
 
   Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Variation: January 17th, 2014
16 days agocyc8 cyclin8: functions primarily during the mitotic cell cycle during maize endosperm development
 
GRMZM2G138886
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Gene Model: November 5th, 2014
16 days agocki2 cyclin-dependent kinase inhibitor2:
 
GRMZM2G037926
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: March 8th, 2017
Variation: May 17th, 2017
Gene Model: March 7th, 2017
16 days agocki4 cyclin-dependent kinase inhibitor4:
 
GRMZM2G358931
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: March 8th, 2017
Variation: May 26th, 2017
Gene Model: March 7th, 2017
16 days agocyc15 cyclin15:
 
GRMZM2G006721
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Gene Model: December 21st, 2018
16 days agocdk8 cyclin dependent kinase8: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II
5.03
GRMZM2G166771
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
16 days agocdk1 cyclin dependent kinase1:
 
   Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: December 29th, 2016
16 days agocyc17 cyclin17:
 
GRMZM2G180728
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Gene Model: November 7th, 2020
16 days agocyc18 cyclin18:
 
GRMZM2G363437
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Gene Model: November 7th, 2020
16 days agocyc19 cyclin19:
 
GRMZM2G026346
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Gene Model: November 7th, 2020
16 days agocyc20 cyclin20:
 
GRMZM2G476685
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Gene Model: November 7th, 2020
16 days agocyc21 cyclin21:
 
GRMZM2G178229
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Gene Model: November 8th, 2020
16 days agocyc22 cyclin22:
 
GRMZM2G047637
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Gene Model: November 8th, 2020
16 days agoIDP847  :
1.01
GRMZM2G038485
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Variation: March 31st, 2005
Gene Model: February 11th, 2019
16 days agocyc5 cyclin5:
8.01
GRMZM2G005619
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: June 26th, 2009
Variation: January 18th, 2014
Gene Model: November 5th, 2014
16 days agocdc1 cell division control protein homolog1:
4.10
GRMZM2G174596
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: December 29th, 2016
Gene Model: December 21st, 2018
16 days agocdk2 cyclin-dependent kinase2:
8.04
GRMZM2G149286
Kamal, KY et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13260     Reference: November 8th, 2020
Gene Product: December 29th, 2016
Gene Model: August 30th, 2019
21 days agompk1 MAP kinase1: cDNA sequence; single copy
9.06
GRMZM2G053987
Liu, YB et al. 2015. Plant Cell, Tissue and Organ Culture (PCTOC) 122:147-159     Reference: November 3rd, 2020
Gene Product: July 12th, 2013
Variation: January 16th, 2013
Gene Model: July 9th, 2013
21 days agoumc1501  :
3.05
       Gene Product: November 3rd, 2020
Variation: September 1st, 2003
21 days agonactf49 NAC-transcription factor 49: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Xiang, Y et al. 2020. J Exp Bot pp.eraa507     Reference: November 3rd, 2020
Gene Product: July 8th, 2019
Variation: March 3rd, 2017
21 days agobhlh82 bHLH-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Xiang, Y et al. 2020. J Exp Bot pp.eraa507     Reference: November 3rd, 2020
Gene Product: September 14th, 2016
Variation: August 30th, 2019
21 days agocfm1 CRM family member1: forms stable complexes with multiple group II introns
 
GRMZM5G813259
Feiz, L et al. 2020. Plant J pp.doi: 10.1111/tpj.15060   At3g18390 (TAIR)
LOC_Os05g47850 (MSU/TIGR)
Reference: November 3rd, 2020
Gene Product: November 3rd, 2020
Variation: November 3rd, 2020
Gene Model: May 20th, 2017
21 days agocfm4 cp RNA splicing factor, CRM domain containing protein4:
 
GRMZM2G142740
  At4g29750 (TAIR)
LOC_Os09g19850 (MSU/TIGR)
Gene Product: November 3rd, 2020
Gene Model: May 21st, 2017
21 days agonut1 necrotic upper tips1: Ac-tagged mutation, necrotic upper leaf tips and blasted tassel.
 
GRMZM2G041668
Dong, ZB et al. 2020. Proc Natl Acad Sci, USA 117:20908-20919   AT1G12260 (TAIR)
LOC_Os06g01480 (MSU/TIGR)
Reference: November 3rd, 2020
Gene Product: July 8th, 2019
Variation: August 11th, 2020
Gene Model: November 15th, 2017
21 days agotmm2 too many mouths-like2: stomatal development-related gene
 
GRMZM2G166413
Xiang, Y et al. 2020. J Exp Bot pp.eraa507     Reference: November 3rd, 2020
Gene Product: July 10th, 2019
Gene Model: November 2nd, 2020
21 days agosbt4 subtilisin4: stomatal development-related gene
 
GRMZM2G429842
Xiang, Y et al. 2020. J Exp Bot pp.eraa507     Reference: November 3rd, 2020
Gene Product: November 11th, 2016
Gene Model: November 2nd, 2020
21 days agompk6 MAP kinase6:
10.03
GRMZM2G089484
Liu, YB et al. 2015. Plant Cell, Tissue and Organ Culture (PCTOC) 122:147-159     Reference: November 3rd, 2020
Gene Product: July 12th, 2013
Variation: January 19th, 2013
Gene Model: July 9th, 2013
21 days agocfm2 CRM family member2: RNA binding; part of a chloroplast stroma ribonucleoprotein complex with CAF1, CAF2 (Asakura and Barkan 2007)
 
GRMZM2G094072
Asakura, M; Barkan, A. 2007. Plant Cell. 19:3864-75     Reference: December 15th, 2015
Gene Product: November 3rd, 2020
Gene Model: December 15th, 2015
21 days agocfm3 CRM family member3: chloroplast and mitochondrial protein; component of ribonucleoprotein in chloroplast with CAF1, CAF2, RNC1, CRS2; binds plastid intron II RNAs; mutants in rice and Arabidopsis are defective in intron II splicing (Asakura et al 2008)
 
GRMZM2G436001
Asakura, Y; Bayraktar, OA; Barkan, A. 2008. RNA-Publ RNA Soc. 14:2319-32     Reference: December 15th, 2015
Gene Product: November 3rd, 2020
Gene Model: December 15th, 2015
21 days agocfm6 CRM family member6:
 
AC214507.3_FG001
Barkan, A, et al. 2007. RNA-Publ RNA Soc. 13:55-64     Reference: December 7th, 2015
Gene Product: November 3rd, 2020
Gene Model: December 16th, 2015
22 days agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Xu, G et al. 2020. Nature communications 11:5539     Reference: November 2nd, 2020
Gene Product: November 4th, 2014
Variation: December 4th, 2018
22 days agoms23 male sterile23: pollen mother cells degeneratedominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6
8.01 - 8.02
GRMZM2G021276
Zhang, M et al. 2020. New Phytol pp.doi: 10.1111/nph.17060     Reference: November 2nd, 2020
Gene Product: September 14th, 2016
Variation: September 6th, 2019
Gene Model: December 4th, 2016
22 days agora1 ramosa1: ear and tassel many-branched; tassel branches taper to tip
7.02
   Xu, G et al. 2020. Nature communications 11:5539     Reference: November 2nd, 2020
Gene Product: April 11th, 2007
Variation: August 20th, 2010
22 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Xu, G et al. 2020. Nature communications 11:5539     Reference: November 2nd, 2020
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
22 days agoumc1028  :
2.05
GRMZM2G115658
Kibe, M et al. 2020. Frontiers Plant Sci 11:572027     Reference: November 2nd, 2020
Variation: September 1st, 2003
Gene Model: February 15th, 2018
22 days agogst23 glutathione transferase23: cDNA, SSR umc2098
7.02
GRMZM2G416632
Kibe, M et al. 2020. Frontiers Plant Sci 11:572027     Reference: November 2nd, 2020
Gene Product: September 1st, 2003
Variation: August 20th, 2010
Gene Model: July 27th, 2016
22 days agozag2 Zea AGAMOUS homolog2: amino acid sequence, deduced from cDNA sequence, has 49% identity to Arabidopsis, floral homeotic gene product; expression restricted to female inflorescence; near ts4
3.05 - 3.05
   Xu, G et al. 2020. Nature communications 11:5539     Reference: November 2nd, 2020
Gene Product: April 1st, 2011
Variation: October 22nd, 2014
22 days agosweet4c sugars will eventually be exported transporter4c: Mutants are defective in seed filling
5.04
GRMZM2G137954
Xu, G et al. 2020. Nature communications 11:5539   LOC_Os02g19820 (MSU/TIGR) Reference: November 2nd, 2020
Gene Product: November 4th, 2015
Variation: November 3rd, 2015
Gene Model: November 3rd, 2015
22 days agohasp1 haspin-like1: required for chromosome alignment and segregation
 
GRMZM2G102944
Liu, Y et al. 2020. J Exp Bot pp.eraa506     Reference: November 2nd, 2020
Gene Product: May 13th, 2014
Gene Model: November 2nd, 2020
22 days agohtcp1 heterochromatin protein1: fails to interact with Haspin
 
GRMZM2G155889
Liu, Y et al. 2020. J Exp Bot pp.eraa506     Reference: November 2nd, 2020
Gene Product: November 2nd, 2020
Gene Model: November 2nd, 2020
22 days agopds5 precocious dissociation of sisters-like5: fails to interact with Haspin
 
GRMZM2G010637
Liu, Y et al. 2020. J Exp Bot pp.eraa506     Reference: November 2nd, 2020
Gene Product: November 2nd, 2020
Gene Model: November 2nd, 2020
22 days agocenH3 centromeric histone H3:
6.06
GRMZM2G158526
Liu, Y et al. 2020. J Exp Bot pp.eraa506     Reference: November 2nd, 2020
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
22 days agodcl102 dicer-like 102: mutants have few or no 24-nt phasiRNAs; plants are temperature-sensitive male sterile
1.07
GRMZM2G413853
Zhang, M et al. 2020. New Phytol pp.doi: 10.1111/nph.17060     Reference: November 2nd, 2020
Gene Product: September 5th, 2006
Variation: June 9th, 2020
Gene Model: January 29th, 2015
24 days agohct5 hydroxycinnamoyltransferase5: up-regulated in the Rp1-D21 mutant lines
2.04
GRMZM2G158083
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
24 days agodek1 defective kernel1: germless; colorless (mosaic) aleurone; floury white endosperm; anthocyanins and carotenoids absent; cultured embryos not obtained (aka clf1, gay1)
1.03
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: October 31st, 2020
24 days agoxcl1 extra cell layers1:
 
   Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Variation: October 31st, 2020
24 days agohct1 hydroxycinnamoyltransferase1: up-regulated in the Rp1-D21 mutant lines; colocalized with the SNP associated with Rp1-D21-induced HR
 
GRMZM2G061806
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
24 days agohct2 hydroxycinnamoyltransferase2: up-regulated in the Rp1-D21 mutant lines; colocalized with the SNP associated with Rp1-D21-induced HR
 
GRMZM2G114918
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
24 days agohct3 hydroxycinnamoyltransferase3: up-regulated in the Rp1-D21 mutant lines
 
GRMZM2G127251
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
24 days agohct4 hydroxycinnamoyltransferase4: up-regulated in the Rp1-D21 mutant lines
 
GRMZM2G030436
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
24 days agohct7 hydroxycinnamoyltransferase7: down-regulated in Rp1-D21 mutant lines
 
AC215260.3_FG003
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
24 days agohct8 hydroxycinnamoyltransferase8: down-regulated in Rp1-D21 mutant lines
 
GRMZM2G178769
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
24 days agohct9 hydroxycinnamoyltransferase9: down-regulated in Rp1-D21 mutant lines
 
GRMZM2G131165
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
24 days agohct10 hydroxycinnamoyltransferase10:
 
GRMZM2G034360
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: May 18th, 2016
24 days agohct12 hydroxycinnamoyltransferase12:
 
GRMZM2G179703
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: May 18th, 2016
24 days agohct13 hydroxycinnamoyltransferase13:
 
GRMZM2G129266
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Gene Model: May 18th, 2016
24 days agoglu5 beta-glucosidase5:
 
GRMZM2G376416
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: June 26th, 2019
Gene Model: October 31st, 2020
24 days agowty2 warty2: encodes a novel leucine rich repeat receptor-like non-functional kinase (LRR-RLK) in the LRR VII subfamily
 
   Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: October 31st, 2020
Variation: October 31st, 2020
24 days agoaas10 auxin amido synthetase10: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
8.03
GRMZM2G001421
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
24 days agohct11 hydroxycinnamoyltransferase11:
7.02
GRMZM2G156296
Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
Variation: March 31st, 2005
Gene Model: May 18th, 2016
24 days agohct6 hydroxycinnamoyltransferase6: up-regulated in the Rp1-D21 mutant lines
5.05
   Matschi, S et al. 2020. Plant Direct doi: 10.1002/pld3.282     Reference: October 31st, 2020
Gene Product: November 7th, 2015
25 days agohsp17.2 heat shock protein17.2: seedling expressed heat shock protein; cDNA sequence similar to other plant 18 kDa heat shock proteins but distinct in maize
3.04
GRMZM2G422240
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 3rd, 2015
25 days agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
GRMZM2G700665
Ricci, WA, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0547-0     Reference: October 30th, 2020
Gene Product: July 5th, 2019
Variation: July 24th, 2019
Gene Model: November 20th, 2012
25 days agoubi1 ubiquitin1: genomic sequence, 7 contiguous direct ubiquitin repeats; transcript specific probe; promoter active in monocots, not in tobacco
 
GRMZM2G409726
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: September 1st, 2003
Variation: November 20th, 2014
Gene Model: November 18th, 2014
25 days agohsftf13 HSF-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: May 15th, 2020
25 days agocol16 C2C2-CO-like-transcription factor 16:
1.06
GRMZM2G159996
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: June 18th, 2018
Variation: December 7th, 2016
Gene Model: December 7th, 2016
25 days agohsp19 heat shock protein19:
9.06
GRMZM2G024718
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 28th, 2018
25 days agohsp101 heat-shock protein 101: normal primary roots contain protein HSP101 conferring acclimation at 40C, to 50C shock; null mutants fail to acclimate and shock is lethal
6.07
   Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: September 1st, 2003
Variation: December 22nd, 2012
25 days agohsp18f heat shock protein18f: induction by heat shock is developmentally constitutive
3.02
   Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: September 1st, 2003
Variation: July 18th, 2014
25 days agopdi1 protein disulfide isomerase1: single copy cDNA, SSR umc1550
4.03
GRMZM2G091481
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: September 1st, 2003
Variation: December 23rd, 2015
Gene Model: October 23rd, 2013
25 days agosal1 supernumerary aleurone1: Mutant allele contains up to seven layers of aleurone cells
9.03
   Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Variation: April 3rd, 2007
25 days agocct2 CO CO-LIKE TIMING OF CAB1 protein domain2: photoperiod response locus; confers later flowering in teosintes under longer day lengths; knockout mutant causes early flowering under long days
 
GRMZM2G004483
Ricci, WA, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0547-0     Reference: October 30th, 2020
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: December 27th, 2017
25 days agohsp6 heat shock protein6:
 
AC209784.3_FG007
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
25 days agohsp11 heat shock protein11:
 
GRMZM2G306679
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
25 days agocrt4 calreticulin4:
 
GRMZM2G074687
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: February 12th, 2007
Gene Model: August 26th, 2020
25 days agophao1 pheophorbide a oxygenase1:
 
GRMZM2G171390
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: August 26th, 2020
Gene Model: August 26th, 2020
25 days agonye1 non-yellowing1:
 
GRMZM2G091837
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: August 26th, 2020
Gene Model: August 26th, 2020
25 days agonye2 non-yellowing2:
 
GRMZM2G379563
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: August 26th, 2020
Gene Model: August 26th, 2020
25 days agohsp20 heat shock protein20:
 
GRMZM2G346839
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: January 15th, 2019
Gene Model: August 26th, 2020
25 days agohsp23 heat shock protein23:
 
GRMZM2G361605
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: September 1st, 2003
Gene Model: August 26th, 2020
25 days agochao1 chlorophyllide a oxygenase1:
 
GRMZM2G103197
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: August 26th, 2020
Gene Model: August 26th, 2020
25 days agocdj4 chaperone DNA J4:
 
GRMZM2G399136
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: September 1st, 2003
Gene Model: August 26th, 2020
25 days agohsp24 heat shock protein24:
 
GRMZM2G375517
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: January 15th, 2019
Gene Model: August 26th, 2020
25 days agobzip60 bZIP transcription factor60: endoplasmic reticulum [ER] stress response
9.03
GRMZM2G025812
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Variation: August 26th, 2020
Gene Model: April 16th, 2013
25 days agopcr1 protochlorophyllide reductase1: leaf cDNA csu349 similar to plant protochlorophyllide reductase
2.01
GRMZM2G084958
Li, ZX; Tang, J; Srivastava, R; Bassham, DC; Howell, SH. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00260.     Reference: October 30th, 2020
Gene Product: June 8th, 2019
Variation: February 25th, 2013
Gene Model: October 8th, 2014
27 days agosig6 sigma-like factor6:
5.00
GRMZM2G144196
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: December 24th, 2019
Variation: June 24th, 2015
Gene Model: May 8th, 2015
Recommended by Ed Coe:
January 25th, 2007
27 days agomyb40 myb transcription factor40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G051256
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Variation: February 18th, 2011
Gene Model: July 28th, 2016
27 days agomyb88 MYB-transcription factor 88: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.00
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: July 25th, 2017
27 days agog2 golden plant2: (aka g5, pg14, v19, pg-m, bsd1) golden pale-green, weak plants; sheaths whitish yellow-green; pg-m (now g2-pg14::I) of Peterson is a mutable allele that responds to En; small bundle sheath plastids; SSR umc2101, umc2102, umc2103, umc2104, umc2105, umc2106, umc2107, umc2108.pale green seedling lethal, reduced Rubisco and NADP-malic enzyme, small bundle sheath plastids
3.00 - 3.01
GRMZM2G087804
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: July 11th, 2019
Variation: October 24th, 2017
Gene Model: August 30th, 2013
27 days agolg2 liguleless2: like lg1, less extreme
3.06
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
27 days agopep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: September 1st, 2003
Variation: May 27th, 2020
27 days agossu1 ribulose bisphosphate carboxylase small subunit1: probed locus; SSRs phi092,phi093
4.08
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
27 days agossu2 ribulose bisphosphate carboxylase small subunit2: probed locus
2.05
GRMZM2G113033
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: September 1st, 2003
Variation: October 14th, 2014
Gene Model: August 7th, 2014
27 days agobzip40 bZIP-transcription factor 40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.06
AC203957.3_FG004
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Variation: September 1st, 2003
Gene Model: February 16th, 2018
27 days agomyb31 MYB31 transcription factor31: R2R3-MYB factor, regulates lignin genes
 
GRMZM2G050305
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8   LOC_Os09g36730 (MSU/TIGR) Reference: October 28th, 2020
Gene Product: February 16th, 2011
Variation: May 6th, 2011
Gene Model: November 30th, 2015
27 days agobhlh43 bHLH-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.08
GRMZM2G165042
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Variation: September 1st, 2003
Gene Model: July 6th, 2017
27 days agopdk1 pyruvate, orthophosphate dikinase1: cDNA, genomic and peptide sequences; microsatellite mapped (SSRs phi025, phi078, phi081; nc012 ); cytosolic or plastidic, dependent on transcript processingmutant seedlings are pale green and lethal once kernel reserves are exhaused, even when plants were grown under 2% CO2
6.05
GRMZM2G306345
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: July 28th, 2014
Variation: April 18th, 2018
Gene Model: November 21st, 2012
27 days agoereb102 AP2-EREBP-transcription factor 102: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to ethylene-responsive transcription factor RAP2-12 of A. thaliana
7.02
GRMZM2G052667
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Variation: September 1st, 2003
Gene Model: September 6th, 2018
27 days agozim28 ZIM-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
GRMZM2G116614
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Variation: September 1st, 2003
Gene Model: December 6th, 2016
27 days agomyb37 MYB-transcription factor 37: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.01
GRMZM2G455869
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Variation: September 1st, 2003
Gene Model: June 15th, 2018
27 days agocol13 C2C2-CO-like-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: June 18th, 2018
27 days agocol2 C2C2-CO-like-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: June 18th, 2018
27 days agocol3 C2C2-CO-like-transcription factor 3: Functions as a repressor of flowering
 
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: June 18th, 2018
27 days agocol7 C2C2-CO-like-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: June 18th, 2018
27 days agocol8 C2C2-CO-like-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: June 18th, 2018
27 days agocchh133 Cys2His2 Zinc Finger133: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: December 6th, 2019
27 days agomyb56 MYB-transcription factor 56: induced by drought and ABA treatments
 
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: July 25th, 2017
27 days agotcptf10 TCP-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: September 27th, 2019
27 days agotcptf23 TCP-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: September 27th, 2019
27 days agobhlh172 bHLH-transcription factor 172: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8   AT1G51070 (TAIR) Reference: October 28th, 2020
Gene Product: September 14th, 2016
27 days agomdh6 malate dehydrogenase6: mesophyll cells, C4 photosynthesis; a second copy may not function in photosynthesis
1.07
GRMZM2G129513
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: September 23rd, 2014
Variation: August 31st, 2010
Gene Model: October 24th, 2013
27 days agome3 NADP malic enzyme3: chloroplast C4-photosynthesis, delivers CO2 to ribulose bisphosphate carboylase
3.02
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: June 27th, 2019
Variation: September 1st, 2003
27 days agohb84 Homeobox-transcription factor 84: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI:putative POX domain/homeobox DNA-binding domain family protein
1.06
GRMZM2G099319
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Variation: December 30th, 2016
Gene Model: December 30th, 2016
27 days agocah2 carbonic anhydrase2: with cah1 promotes leaf CO2 availability for photosynthesis (Studer et al 2014)
 
GRMZM2G348512
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: February 26th, 2019
Variation: May 25th, 2018
Gene Model: July 31st, 2014
27 days agomybr17 MYB-related-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.09
GRMZM2G071977
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Variation: September 1st, 2003
Gene Model: August 31st, 2018
27 days agoknox6 knotted related homeobox6: similar to knox2 in sequence and expression; cDNA and genomic clones; gene specific probe
5.04
GRMZM2G370332
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: September 1st, 2003
Variation: August 12th, 2014
Gene Model: August 12th, 2014
27 days agodof21 C2C2-Dof-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.02
GRMZM2G162749
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Variation: January 6th, 2017
Gene Model: January 6th, 2017
27 days agohmg1 high mobility group protein1: cDNA sequence isolated by immunoscreening, homologous to vertebrate HMG1 family, single or low copy gene
5.03
   Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: September 1st, 2003
Variation: July 26th, 2013
27 days agomyb38 myb transcription factor38: cDNA isolated by homology to C1, sequence distinct from C1
 
GRMZM2G084583
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: September 1st, 2003
Variation: October 20th, 2016
Gene Model: February 23rd, 2015
27 days agolhy1 late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010)
10.03
GRMZM2G474769
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: July 31st, 2016
Variation: December 28th, 2016
Gene Model: December 28th, 2016
27 days agocah1 carbonic anhydrase1: C4 carbonic anhydrase; higher transcripts in mesophyll cells (Tausta 2014); double mutants with cah2 virutally remove this activity from leaf (Studer et al 2014).
 
GRMZM2G121878
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: February 26th, 2019
Variation: May 25th, 2018
Gene Model: July 31st, 2014
27 days agomab16 math-btb16:
 
GRMZM2G172210
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: June 6th, 2014
Variation: May 10th, 2017
Gene Model: February 14th, 2017
27 days agocol18 C2C2-CO-like-transcription factor 18:
 
GRMZM2G148772
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
27 days agonactf23 NAC-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. similar to protein ATAF2 of A. thaliana
8.08
GRMZM2G068973
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Variation: March 31st, 2005
Gene Model: June 14th, 2019
27 days agomybst1 single-repeat Myb protein1:
9.04
GRMZM2G034110
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: December 24th, 2015
Variation: January 26th, 2010
Gene Model: December 24th, 2015
27 days agoglk1 G2-like1: g2 golden2 paralog; specifically affects mesophyll chloroplast assembly, but not bundle sheath chloroplast assembly (Wang et al 2013)
9.00
GRMZM2G026833
Tu, XY, et al. 2020. Nature communications. 0:doi: 10.1038/s41467-020-18832-8     Reference: October 28th, 2020
Gene Product: July 11th, 2019
Variation: May 9th, 2009
Gene Model: September 27th, 2012
28 days agoct2 compact plant2: semi-dwarf plant, 1/3 height; shortened internodes; club tassel, fasciated ear
1.01 - 1.02
GRMZM2G064732
An, YX et al. 2020. BMC Plant Biology 20:490     Reference: October 27th, 2020
Gene Product: September 16th, 2013
Variation: September 20th, 2013
Gene Model: September 16th, 2013
28 days agotps11 terpene synthase11: involved in pathway leading to biosynthesis of zealexins (Ding et al., 2020)
10.03
GRMZM2G127087
Ding, YZ et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-00787-9     Reference: October 27th, 2020
Gene Product: September 3rd, 2008
Variation: September 3rd, 2008
Gene Model: August 22nd, 2012
28 days agowab1 Wavy auricles in blades1: dominant confers auricle tissue in blade portion of leafrecessive mutants showed extremely acute tassel branch angles accompanied by a significant reduction in the size of the pulvinus compared with normal plants
2.06 - 2.07
GRMZM2G110242
An, YX et al. 2020. BMC Plant Biology 20:490   LOC_Os09g24480 (MSU/TIGR)
Os09g0410500 (Gramene)
Reference: October 27th, 2020
Gene Product: September 14th, 2016
Variation: November 2nd, 2014
Gene Model: November 2nd, 2014
28 days agofea3 fasciated ear3: ear tip broad and branched, typically splitting and showing ring fasciation to form a hollow ear.
 
GRMZM2G166524
An, YX et al. 2020. BMC Plant Biology 20:490   At3g25670 (TAIR)
LOC_Os01g02060 (MSU/TIGR)
Reference: October 27th, 2020
Gene Product: July 10th, 2019
Variation: May 18th, 2016
Gene Model: May 18th, 2016
28 days agonactf48 NAC-transcription factor 48: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G054252
Sahito, JH et al. 2020. Plants 9:1447     Reference: October 27th, 2020
Variation: January 27th, 2017
Gene Model: January 27th, 2017
28 days agocyp33 cytochrome P450 CYP81A39: involved in pathway leading to biosynthesis of zealexins (Ding et al., 2020)
1.10
GRMZM2G154828
Ding, YZ et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-00787-9     Reference: October 27th, 2020
Gene Product: March 25th, 2019
Gene Model: February 15th, 2020
28 days agovt2 vanishing tassel2: inflorescence development; TRP-dependent auxin synthesis
 
GRMZM2G127308
An, YX et al. 2020. BMC Plant Biology 20:490   AT1G70560 (TAIR) Reference: October 27th, 2020
Gene Product: April 30th, 2011
Variation: June 24th, 2011
Gene Model: May 2nd, 2012
28 days agocyp22 cytochrome P-450 22: involved in pathway leading to biosynthesis of zealexins (Ding et al., 2020)
 
GRMZM2G067591
Ding, YZ et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-00787-9     Reference: October 27th, 2020
Gene Product: March 25th, 2019
Gene Model: February 26th, 2018
28 days agotps12 terpene synthase12: involved in pathway leading to biosynthesis of zealexins (Ding et al., 2020)
 
   Ding, YZ et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-00787-9     Reference: October 27th, 2020
Gene Product: September 3rd, 2008
28 days agotps13 terpene synthase13: involved in pathway leading to biosynthesis of zealexins (Ding et al., 2020)
 
GRMZM2G028306
Ding, YZ et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-00787-9     Reference: October 27th, 2020
Gene Product: September 3rd, 2008
Gene Model: October 27th, 2020
28 days agocyp29 cytochrome P450 CYP71Z19: involved in pathway leading to biosynthesis of zealexins (Ding et al., 2020)
 
GRMZM2G122654
Ding, YZ et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-00787-9     Reference: October 27th, 2020
Gene Product: March 25th, 2019
Gene Model: October 27th, 2020
28 days agocyp30 cytochrome P450 CYP71Z16: involved in pathway leading to biosynthesis of zealexins (Ding et al., 2020)
 
   Ding, YZ et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-00787-9     Reference: October 27th, 2020
Gene Product: March 25th, 2019
28 days agocyp31 cytochrome P450 CYP81A37: involved in pathway leading to biosynthesis of zealexins (Ding et al., 2020)
 
GRMZM2G118809
Ding, YZ et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-00787-9     Reference: October 27th, 2020
Gene Product: March 25th, 2019
Gene Model: October 27th, 2020
28 days agocyp32 cytochrome P450 CYP81A38: involved in pathway leading to biosynthesis of zealexins (Ding et al., 2020)
 
GRMZM2G154870
Ding, YZ et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-00787-9     Reference: October 27th, 2020
Gene Product: March 25th, 2019
Gene Model: October 27th, 2020
28 days agonactf136 NAC-transcription factor 136: ZmNAC9 homologous gene
 
   Sahito, JH et al. 2020. Plants 9:1447     Reference: October 27th, 2020
Gene Product: July 8th, 2019
28 days agomca1 metacaspase1: encodes a type I metacaspase
 
GRMZM2G155422
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agomca2 metacaspase2: encodes a type I metacaspase
 
GRMZM2G035928
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agomca3 metacaspase3: encodes a type I metacaspase
 
GRMZM2G120069
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agomca4 metacaspase4: encodes a type I metacaspase
 
GRMZM2G120079
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agomca5 metacaspase5: encodes a type I metacaspase
 
GRMZM2G125314
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agomca6 metacaspase6: encodes a type I metacaspase
 
GRMZM2G132238
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agomca7 metacaspase7: encodes a type I metacaspase
 
GRMZM2G337548
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agomca8 metacaspase8: encodes a type I metacaspase
 
GRMZM2G320206
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agomca9 metacaspase9: encodes a type II metacaspase
 
GRMZM2G047274
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agomca10 metacaspase10: encodes a type II metacaspase
 
GRMZM2G066041
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agomca11 metacaspase11: encodes a type II metacaspase
 
GRMZM2G022799
Luan, Q-L et al. 2020. Plant J pp.doi: 10.1111/tpj.15047     Reference: October 27th, 2020
Gene Product: October 27th, 2020
Gene Model: October 27th, 2020
28 days agocko4 cytokinin oxidase 4:
 
GRMZM5G817173
An, YX et al. 2020. BMC Plant Biology 20:490     Reference: October 27th, 2020
Gene Product: April 4th, 2014
Gene Model: March 21st, 2014
28 days agotps6 terpene synthase6: involved in pathway leading to biosynthesis of zealexins (Ding et al., 2020)
10.03
GRMZM2G127087
Ding, YZ et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-00787-9     Reference: October 27th, 2020
Gene Product: September 3rd, 2008
Variation: May 28th, 2012
Gene Model: May 28th, 2012
29 days agosdg118 set domain gene118:
8.06
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: October 26th, 2020
29 days agogbf1 G-box binding factor1: anoxia induced, nuclear, basic-region leucine zipper protein; low copy number; cDNA clone
6.07
GRMZM2G011932
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: September 1st, 2003
Variation: December 7th, 2012
Gene Model: July 27th, 2016
29 days agomads68 MADS-transcription factor 68: Ortholog of rice MADS47; regulates zein gene transcription by interacting with o2 (Qiao et al., 2016)
1.02
GRMZM2G059102
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044   LOC_Os03g08754 (MSU/TIGR) Reference: October 26th, 2020
Variation: April 15th, 2016
Gene Model: April 15th, 2016
29 days agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
   Hu, YF et al. 2020. Plant J pp.doi: 10.1111/tpj.15043     Reference: October 26th, 2020
Gene Product: February 24th, 2015
Variation: March 16th, 2018
29 days agolg3 liguleless3: dominant Lg3 plants lack ligule; leaves upright, broad, often concave and pleated; homeobox similar to knox5 and knox11
3.04
   Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: August 22nd, 2014
Variation: March 16th, 2015
29 days agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Hu, YF et al. 2020. Plant J pp.doi: 10.1111/tpj.15043     Reference: October 26th, 2020
Gene Product: November 4th, 2014
Variation: January 9th, 2019
29 days agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
   Hu, YF et al. 2020. Plant J pp.doi: 10.1111/tpj.15043     Reference: October 26th, 2020
Gene Product: April 21st, 2016
Variation: June 6th, 2016
29 days agosu2 sugary2: endosperm glassy, translucent, sometimes wrinkled
6.04 - 6.05
   Hu, YF et al. 2020. Plant J pp.doi: 10.1111/tpj.15043     Reference: October 26th, 2020
Gene Product: October 14th, 2016
Variation: October 7th, 2010
29 days agoprh24 protein phosphatase homolog24:
5.00
GRMZM2G144109
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 13th, 2018
29 days agoereb24 AP2-EREBP-transcription factor 24: similar to Arabidopsis AP2-like ethylene-responsive transcription factorLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G086573
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Variation: September 1st, 2003
Gene Model: February 21st, 2018
29 days agonfya1 nuclear transcription factor y subunit a1:
1.02
GRMZM2G000686
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: August 9th, 2016
Variation: May 18th, 2016
Gene Model: May 18th, 2016
29 days agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044   LOC_Os1g67410 (MSU/TIGR) Reference: October 26th, 2020
Gene Product: July 5th, 2019
29 days agoca2p4 CCAAT-HAP2-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: August 9th, 2016
29 days agoca3p4 CCAAT-HAP3-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: August 9th, 2016
29 days agoca5p3 CCAAT-HAP5-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: August 9th, 2016
29 days agonactf108 NAC-transcription factor 108: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.functions as a negative regulator of the stay‐green trait
 
   Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: July 8th, 2019
Variation: May 4th, 2019
29 days agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
   Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: July 5th, 2019
Variation: December 17th, 2014
29 days agowrky29 WRKY-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: July 24th, 2017
29 days agobzip4 bZIP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: August 21st, 2018
Variation: August 21st, 2018
29 days agogrftf8 GRF-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G041223
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Variation: September 1st, 2003
Gene Model: February 22nd, 2018
29 days agosbe1 starch branching enzyme1: maize kernel cDNA sequence is similar to starch branching enzyme I of bacteria, encodes a putative 64-amino acid plastid transit peptide (aka sbe1)
5.03
   Hu, YF et al. 2020. Plant J pp.doi: 10.1111/tpj.15043     Reference: October 26th, 2020
Gene Product: September 1st, 2003
Variation: January 5th, 2018
29 days agosbe3 starch branching enzyme3:
8.06
GRMZM2G005298
Hu, YF et al. 2020. Plant J pp.doi: 10.1111/tpj.15043     Reference: October 26th, 2020
Gene Product: June 6th, 2011
Variation: June 1st, 2011
Gene Model: September 23rd, 2018
29 days agosar1 secretion-associated Ras-related homolog1: endosperm cDNA 5C03G12 (uaz151), similar to Arabidopsis sar1 homologue
3.04
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: October 26th, 2020
Variation: March 16th, 2015
29 days agobip1 Binding protein homolog1: cDNA clone, protein body, putative molecular chaperone of hsp70 family
5.03
   Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: September 1st, 2003
Variation: October 30th, 2012
29 days agonlp7 NLP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.01
GRMZM2G109509
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: December 3rd, 2019
Gene Model: October 7th, 2017
29 days agoiso3 isoamylase-type starch debranching enzyme3:
 
GRMZM2G150796
Hu, YF et al. 2020. Plant J pp.doi: 10.1111/tpj.15043     Reference: October 26th, 2020
Gene Product: October 25th, 2011
Variation: April 7th, 2011
Gene Model: July 28th, 2016
29 days agocca1 circadian clock associated1: myb transcription factor - clock gene
 
GRMZM2G014902
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: July 31st, 2016
Variation: March 18th, 2011
Gene Model: July 30th, 2016
29 days agopx17 peroxidase17:
 
GRMZM2G427903
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: September 18th, 2015
Gene Model: October 26th, 2020
29 days agoccp7 cysteine protease7:
 
GRMZM2G077479
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: May 23rd, 2019
Gene Model: October 26th, 2020
29 days agosar2 secretion-associated Ras-related homolog2:
 
GRMZM2G181536
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: October 26th, 2020
Gene Model: October 26th, 2020
29 days agodbf1 DRE-binding protein 1:
1.07
GRMZM2G061487
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: April 10th, 2013
Variation: July 27th, 2005
Gene Model: July 27th, 2016
29 days agodbb6 double B-box zinc finger protein6:
5.05
GRMZM2G095299
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
29 days agobi1 bax inhibitor1:
5.03
GRMZM2G029087
Ko, DK; Brandizzi, F. 2020. Plant J pp.doi: 10.1111/tpj.15044     Reference: October 26th, 2020
Gene Product: October 26th, 2020
Gene Model: October 26th, 2020
30 days agomet6 DNA methyl transferase6:
8.05
   Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: October 25th, 2020
32 days agocep8 C-terminally encoded peptide8:
8.03
GRMZM2G061450
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: August 30th, 2019
32 days agozim32 ZIM-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Bai, YH et al. 2011. Genomics 98:128-136     Reference: October 23rd, 2020
Variation: February 17th, 2019
32 days agocep7 C-terminally encoded peptide7:
7.02
GRMZM2G446946
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: September 6th, 2018
32 days agomtopvib1 meiotic TopoVI B subunit1: mutant plants exhibited normal vegetative growth but male and female sterility
 
GRMZM2G439198
Jing, JL et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00933     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Variation: October 23rd, 2020
Gene Model: October 21st, 2020
32 days agocep2 C-terminally encoded peptide2:
 
GRMZM2G156026
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: October 23rd, 2020
32 days agocep3 C-terminally encoded peptide3:
 
AC205968.3_FG001
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: October 23rd, 2020
32 days agocep4 C-terminally encoded peptide4:
 
AC187283.3_FG005
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: October 23rd, 2020
32 days agocep6 C-terminally encoded peptide6:
 
AC206165.3_FG009
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: October 23rd, 2020
32 days agocep9 C-terminally encoded peptide9:
 
   Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
32 days agocep10 C-terminally encoded peptide10:
 
   Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
32 days agoAW036917  :
6.05
GRMZM2G106218
    Variation: October 23rd, 2020
Gene Model: May 30th, 2017
32 days agocep5 C-terminally encoded peptide5:
6.05
GRMZM2G148964
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Variation: March 31st, 2005
Gene Model: October 23rd, 2020
32 days agocep1 C-terminally encoded peptide1:
1.07
GRMZM2G007969
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: February 11th, 2020
33 days agopza00067  :
5.04
GRMZM2G151916
    Variation: September 25th, 2007
Gene Model: October 22nd, 2020
33 days agolw2 lemon white2: like lw1
5.05
GRMZM2G137409
Wang, HH et al. 2020. Nature communications 11:5346     Reference: October 22nd, 2020
Gene Product: February 8th, 2019
Variation: October 22nd, 2020
Gene Model: February 8th, 2019
33 days agohyd3 hydroxylase3: beta-carotene hydroxylase
 
GRMZM2G152135
Wang, HH et al. 2020. Nature communications 11:5346     Reference: October 22nd, 2020
Gene Product: December 13th, 2011
Variation: October 22nd, 2020
Gene Model: April 9th, 2013
33 days agodxs2 deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes
9.03
GRMZM2G493395
Wang, HH et al. 2020. Nature communications 11:5346     Reference: October 22nd, 2020
Gene Product: August 17th, 2004
Variation: October 22nd, 2020
Gene Model: December 9th, 2011
33 days agohppd1 4-hydroxyphenylpyruvate dioxygenase 1:
5.04
GRMZM2G088396
Wang, HH et al. 2020. Nature communications 11:5346     Reference: October 22nd, 2020
Gene Product: June 2nd, 2005
Variation: October 22nd, 2020
Gene Model: July 28th, 2016
34 days agoeng1 endo-1,3-1,4-beta-D-glucanase1: coleoptile enzyme, orthologous to rice enzyme; located in cell wall, IAA- stimulated coleoptile growth inhibited by antibody
4.05
GRMZM2G073079
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Variation: May 20th, 2009
Gene Model: June 1st, 2017
Recommended by Ed Coe:
January 8th, 2008
34 days agopmi2 phosphomannose isomerase2:
4.02
GRMZM2G456471
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: April 11th, 2020
34 days agoask1 aspartate kinase1: lysine-threonine resistance in cultures and seedlings, increased threonine in kernels, altered kinetics of aspartate kinase
1.12
GRMZM2G024686
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: September 10th, 2010
Gene Model: October 21st, 2020
34 days agophi1 phosphohexose isomerase1: electrophoretic mobility; null allele is known; cytosolic; dimeric; intralocus hybrid bands occur; cDNA clone pGPI1a (Lal & Sachs, 1995)
1.11 - 1.11
GRMZM2G065083
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: October 1st, 2014
Gene Model: August 25th, 2014
34 days agodhn1 dehydrin1: protein induced by abscisic acid; cDNA sequence agrees with amino acid sequence (aka dhn3, rab17, rny1)
6.05
   Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: November 20th, 2012
34 days agosod2 superoxide dismutase2: electrophoretic mobility; cytosolic; Cu-Zn dimeric
7.05
   Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: February 12th, 2007
Variation: August 2nd, 2013
34 days agocta1 chitinase A1: cDNA sequence corresponds to peptide sequence of maize 28kDa chitinase A
2.04
   Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
34 days agosbp1 SBP-domain protein1: cDNA sequence, SSR's umc1575, umc1624
5.04
GRMZM2G111136
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: July 5th, 2019
Variation: October 8th, 2011
Gene Model: December 18th, 2014
34 days agodps1 dihydrodipicolinate synthase1: cDNA complements E. coli mutant (AT997dapA-) blocked in DHPS (aka dhp1)
 
GRMZM2G027835
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 5th, 2015
34 days agopmm1 phosphomannomutase1:
2.00
GRMZM2G165535
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: February 23rd, 2018
34 days agodhn3 dehydrin3:
4.06
GRMZM2G373522
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: August 5th, 2017
Variation: June 18th, 2011
Gene Model: October 16th, 2016
34 days agoakh2 aspartate kinase homoserine dehydrogenase2: cDNA sequence 75% homologous to carrot threonine sensitive AK-HSDH bifunctional enzyme
2.06
   Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
34 days agogmp2 mannose-1-phosphate guanylyltransferase2:
8.07
   Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Variation: July 29th, 2004
34 days agodapf1 diaminopimelate+epimerase1:
1.05
GRMZM2G130332
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: February 9th, 2020
34 days agogldh1 galactono lactone dehydrogenase1: ascorbate biosynthesis, based on orthology to the Arabidopsis gene vtc2.
2.05
GRMZM2G469969
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: March 29th, 2013
Gene Model: March 29th, 2013
34 days agopld2 phospholipase D2:
 
GRMZM2G061969
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: August 9th, 2016
Gene Model: August 9th, 2016
34 days agoprx39 peroxidase39:
 
GRMZM2G085967
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
34 days agohsp8 heat shock protein8:
 
GRMZM2G080724
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
34 days agoaas8 auxin amido synthetase8: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G053338
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
34 days agoasd1 aspartate-semialdehyde dehydrogenase1:
5.01
GRMZM2G076885
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agodhn15 dehydrin15:
 
GRMZM2G147014
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: August 5th, 2017
Gene Model: July 3rd, 2020
34 days agodps2 dihydrodipicolinate synthase2:
 
GRMZM2G556131
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Gene Model: October 21st, 2020
34 days agodapf2 diaminopimelate+epimerase2:
 
AC182617.3_FG001
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agolysA1 dihydrodipicolinate decarboxylase1:
 
GRMZM2G020446
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agolysA2 dihydrodipicolinate decarboxylase2:
 
GRMZM2G090722
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agodapat1 diaminopimelate aminotransferase1:
 
GRMZM2G010328
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agodapat2 diaminopimelate aminotransferase2:
 
GRMZM2G415117
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agodapat3 diaminopimelate aminotransferase3:
 
GRMZM2G119150
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agodapB1 dihydrodipicolinate reductase1:
 
GRMZM2G104575
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agodapB2 dihydrodipicolinate reductase2:
 
GRMZM2G090241
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agogmp1 mannose-1-phosphate guanylyltransferase1:
 
GRMZM2G119300
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agopmi1 phosphomannose isomerase1:
 
GRMZM2G121066
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agogpp1 galactose-1-phosphate phosphatase1:
 
GRMZM2G034417
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
34 days agophi3 phosphohexose isomerase3:
 
GRMZM2G140614
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Gene Model: October 21st, 2020
34 days agophi2 phosphohexose isomerase2:
 
GRMZM2G076075
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Gene Model: October 21st, 2020
34 days agogaldh1 galactose dehydrogenase1:
10.03
GRMZM2G126002
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: June 29th, 2020
34 days agogme1 GDP-mannose-3'5'-epimerase1:
1.08
GRMZM2G124434
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Variation: March 31st, 2005
Gene Model: February 14th, 2019
34 days agomagi2594  :
1.11
GRMZM2G352415
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Variation: April 24th, 2006
Gene Model: February 16th, 2020
34 days agogme2 GDP-mannose-3'5'-epimerase2:
4.02
GRMZM2G138907
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Variation: September 25th, 2007
Gene Model: April 11th, 2020
34 days agoglx1 glyoxylase1:
10.03
GRMZM2G181192
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: October 13th, 2015
Variation: March 5th, 2008
Gene Model: January 23rd, 2015
34 days agoppo1 polyphenol oxidase1: vegetative meristem cDNA 7C02D02
10.03
GRMZM5G851266
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: January 21st, 2015
Gene Model: January 21st, 2015
35 days agopsei2 cystatin2: cDNA expressed in E. coli inhibits cysteine proteinases; sequence and gene product activity distinct from psei1
8.08
   van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: April 21st, 2008
Variation: January 15th, 2015
35 days agotps23 terpene synthase23: part of defense response to herbivory by western maize rootworm and Spodoptera littoralis but not expressed highly in most North American maize
10.03
GRMZM2G127336
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: July 21st, 2008
Variation: November 21st, 2017
Gene Model: August 22nd, 2012
35 days agobx1 benzoxazinless1: plastid localized, committed step in cyclic hydroxamates/DIMBOA synthesis; insect resistance in young seedlings; SSR umc1022
4.00
GRMZM2G085381
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: October 14th, 2011
Variation: April 12th, 2019
Gene Model: October 14th, 2011
35 days agopal1 phenylalanine ammonia lyase homolog1: leaf cDNA csu156 similar to rice phenylalanine ammonia lyase, single copy
5.05
   van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 6th, 2019
Variation: September 24th, 2014
35 days agostp1 sugar transport1: leaf cDNA csu142 similar to yeast plasma membrane sugar transport protein, single copy
8.03
   van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 1st, 2003
Variation: August 26th, 2015
35 days agosci1 subtilisin-chymotrypsin inhibitor homolog1: cDNA from germinating embryo infected with Fusarium moniliforme; similar to subtilisin-chymotrypsin inhibitor
8.05
   van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 1st, 2003
Variation: August 25th, 2015
35 days agoopr7 12-oxo-phytodienoic acid reductase7: peroxisomal; jasmonic acid synthesis; opr7 opr8 double mutants are feminized, and have increased susceptibiliy to insect and fungal pests
 
GRMZM2G148281
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
35 days agolox5 lipoxygenase5:
5.02
GRMZM2G102760
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: January 3rd, 2018
Variation: April 20th, 2018
Gene Model: June 10th, 2014
35 days agoprp4 pathogenesis related protein4:
7.00
GRMZM2G465226
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: July 25th, 2018
Variation: August 29th, 2011
Gene Model: November 20th, 2014
35 days agonced5 nine-cis-epoxycarotenoid dioxygenase5:
 
GRMZM2G417954
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 20th, 2012
Variation: September 1st, 2011
Gene Model: September 20th, 2012
35 days agosaur2 small auxin up RNA2:
 
GRMZM2G156470
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 1st, 2003
Gene Model: March 25th, 2020
35 days agotsah1 tryptophan synthase A homolog1: Homologous to tryptophan synthase alpha subunit but does occur as part of native tryptophan synthase. Localized in the cytosol (Kriechbaumer et al 2008). Function unknown.
1.11
GRMZM2G046163
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: October 14th, 2011
Variation: August 15th, 2014
Gene Model: September 10th, 2018
35 days agoacs6 1-aminocyclopropane-1-carboxylate synthase6:
1.10
GRMZM2G054361
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: May 16th, 2016
Variation: August 4th, 2008
Gene Model: January 21st, 2016
35 days agopsei9 cystatin9: apoplastic; necessary for Ustilago maydis infection;induced by U. maydis to bypass host immunity provided by apoplostic proteases(van der Linde 2012)
4.03
AC196110.4_FG004
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: February 12th, 2014
36 days agolhca1 light harvesting complex A1: leaf cDNA csu800 similar to photosystem I antenna protein
2.08
GRMZM2G038519
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: September 1st, 2003
Variation: February 18th, 2015
Gene Model: February 18th, 2015
36 days agobx14 benzoxazinone synthesis14: encodes an O-methyltransferase that converts DIM2BOA-Glc to HDM2BOA-Glc.
2.05
GRMZM2G127418
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: July 8th, 2013
Variation: June 20th, 2016
Gene Model: June 20th, 2016
36 days agovp1 viviparous1: embryo fails to become dormant, viable if transplanted; some alleles dormant; chlorophyll and carotenoids unaffected; anthocyanins in aleurone suppressed (aka vp4); cDNA
3.05
   Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: July 29th, 2015
Variation: August 22nd, 2013
36 days agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
GRMZM2G300348
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
36 days agobnlg2271  :
7.03
GRMZM2G313643
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Variation: September 1st, 2003
Gene Model: September 10th, 2018
36 days agoereb197 AP2-EREBP-transcription factor 197: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G174784
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Variation: September 1st, 2003
Gene Model: February 17th, 2018
36 days agocchh2 Cys2His2 Zinc Finger2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: December 6th, 2019
36 days agosbp4 (GRASSIUS) SBP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: July 5th, 2019
36 days agozp15 zein protein, 15kDa15: high methionine; genomic blot indicates one or two copies
6.01 - 6.02
GRMZM2G086294
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: July 8th, 2013
Variation: August 27th, 2013
Gene Model: July 8th, 2013
36 days agoumc2297  :
5.03
GRMZM2G047175
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Variation: September 25th, 2007
Gene Model: June 23rd, 2018
36 days agolaz8 lazarus ortholog8: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G373717
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
36 days agouce20 ubiquitin-conjugating enzyme20: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G433968
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
36 days agopfk3 phosphofructokinase3:
 
GRMZM2G401970
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: January 8th, 2020
Gene Model: January 8th, 2020
36 days agokcs22 3-ketoacyl-CoA synthase22:
 
GRMZM2G168956
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
36 days agoppr375 pentatricopeptide repeat protein375: ortholog of Arabidopsis MTL1
 
GRMZM2G030263
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480   AT5G64320 (TAIR) Reference: October 19th, 2020
Gene Product: December 27th, 2016
Gene Model: September 17th, 2020
36 days agocry1 cryptochrome1:
5.05
GRMZM2G024739
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
36 days agoIDP2400  :
1.12
GRMZM2G021642
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Variation: March 31st, 2005
Gene Model: February 16th, 2019
36 days agoIDP723  :
2.05
GRMZM2G008864
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Variation: March 31st, 2005
Gene Model: February 19th, 2019
36 days agodar3 monodehydroascorbate reductase3:
10.03
GRMZM5G828229
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: October 15th, 2020
Variation: March 31st, 2005
Gene Model: January 3rd, 2018
36 days agovp14 viviparous14: viviparous; yellow endosperm; abscisic acid biosynthesis; SSR umc1218
1.08
GRMZM2G014392
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: September 20th, 2012
Variation: June 25th, 2007
Gene Model: May 13th, 2011
37 days agohk2 histidine kinase2: cytokinin responsive histidine protein kinase
3.05
   Yonekura-Sakakibara, K; Kojima, M; Yamaya, T; Sakakibara, H. 2004. Plant Physiol. 134:1654-1661     Reference: July 7th, 2004
Gene Product: May 20th, 2016
Variation: October 18th, 2020
38 days agolyce1 lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids
8.05
GRMZM2G012966
Dutta, S et al. 2020. Mol Genet Genomics pp.doi: 10.1007/s00438-020-01734-1     Reference: October 17th, 2020
Gene Product: December 10th, 2011
Variation: October 3rd, 2011
Gene Model: October 3rd, 2011
38 days agowc1 white cap1: dominant Wc1 kernels have pale yellow endosperm if Y1 (pearly white with y1); whiteness is emphasized in soft-starch crowns
9.07
   Dutta, S et al. 2020. Mol Genet Genomics pp.doi: 10.1007/s00438-020-01734-1     Reference: October 17th, 2020
Gene Product: September 20th, 2012
Variation: October 5th, 2012
38 days agocbl1 calcineurin B-like1:
 
GRMZM2G107575
Chen, XJ et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13244     Reference: October 17th, 2020
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
38 days agocipk42 calcineurin B-like-interacting protein kinase42: mutant plants have less branched tassel and impaired salt stress tolerance at the seedling stage
 
GRMZM2G011919
Chen, XJ et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13244     Reference: October 17th, 2020
Gene Product: August 25th, 2018
Variation: October 17th, 2020
Gene Model: October 17th, 2020
38 days agocbl4 calcineurin B-like2:
6.06
GRMZM2G001221
Chen, XJ et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13244     Reference: October 17th, 2020
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
38 days agoIDP1657  :
2.07
GRMZM2G154904
    Variation: March 31st, 2005
Gene Model: October 17th, 2020
39 days agosig1 sigma70-like-transcription factor 1:
1.03
GRMZM2G003182
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
Gene Model: October 16th, 2020
Recommended by Ed Coe:
January 25th, 2007
39 days agopropep1 precursor elicitor peptide1:
 
GRMZM5G899080
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Variation: March 4th, 2011
Gene Model: May 17th, 2013
39 days agosig3 Sigma70-like-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G003182
Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: December 24th, 2019
Gene Model: October 16th, 2020
39 days agopropep2 precursor elicitor peptide2:
 
GRMZM2G177412
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Gene Model: May 17th, 2013
39 days agofdx3 ferredoxin3: ubiquitous, cDNA clone, gene specific probe, amino acid sequence; SSR umc1064, pFD3
1.11
GRMZM2G053458
Kaur, K et al. 2020. J Biosciences 45:132     Reference: October 16th, 2020
Gene Product: September 1st, 2003
Variation: January 29th, 2015
Gene Model: July 25th, 2017
39 days agolox9 lipoxygenase9:
1.02
GRMZM2G017616
Kaur, K et al. 2020. J Biosciences 45:132     Reference: October 16th, 2020
Gene Product: January 3rd, 2018
Variation: June 12th, 2014
Gene Model: October 23rd, 2013
39 days agopropep3 precursor elicitor peptide3: herbivore defense signal
 
GRMZM2G339117
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Gene Model: May 17th, 2013
39 days agopropep4 precursor elicitor peptide4:
 
GRMZM2G141133
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Gene Model: May 17th, 2013
39 days agopropep5 precursor elicitor peptide5:
 
GRMZM2G141071
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Gene Model: May 17th, 2013
39 days agopropep6 precursor elicitor peptide6:
 
GRMZM2G440972
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Gene Model: October 16th, 2020
39 days agorboh2 respiratory burst oxidase2:
3.07
GRMZM2G138152
Kaur, K et al. 2020. J Biosciences 45:132     Reference: October 16th, 2020
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
40 days agoapx2 ascorbate peroxidase2: leaf cDNA, similar to plant cytosolic ascorbate peroxidase; sequence distinct from apx1
2.08
GRMZM2G140667
Qu, CX et al. 2020. Genes 11:1204     Reference: October 15th, 2020
Gene Product: September 1st, 2003
Variation: February 16th, 2015
Gene Model: February 16th, 2015
Recommended by Ed Coe:
January 8th, 2008
40 days agodhar1 dehydroascorbate reductase like1:
8.05
GRMZM5G855672
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: March 28th, 2013
Gene Model: April 1st, 2013
40 days agoapx11 ascorbate peroxidase11:
10.02
GRMZM2G014397
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Gene Model: January 25th, 2018
40 days agogsr1 glutathione reductase1: single copy leaf cDNA csu111, similar to pea glutathione reductase
1.01
   Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: September 1st, 2003
Variation: January 30th, 2015
40 days agoprr1 putidaredoxin reductase homolog1: endosperm cDNA 5C04E05 (uaz204), similar to NADH-putidaredoxin reductase
5.06
GRMZM2G320307
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: September 1st, 2003
Variation: December 18th, 2014
Gene Model: December 18th, 2014
40 days agodar1 monodehydroascorbate reductase homolog1: leaf cDNA csu196 sequence similar to cucumber monodehydroascorbate reductase (NADH)
2.06
GRMZM2G084881
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: September 1st, 2003
Variation: November 17th, 2012
Gene Model: July 27th, 2016
40 days agoapx3 ascorbate peroxidase homolog3:
 
GRMZM2G137839
Qu, CX et al. 2020. Genes 11:1204     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Variation: August 11th, 2012
Gene Model: June 19th, 2013
40 days agodhar2 dehydroascorbate reductase like2:
 
GRMZM2G005710
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: March 28th, 2013
Gene Model: August 14th, 2017
40 days agoapx4 ascorbate peroxidase4:
 
GRMZM2G316256
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: October 15th, 2020
Variation: June 5th, 2017
Gene Model: June 5th, 2017
40 days agoapx6 ascorbate peroxidase6:
 
GRMZM2G004211
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Gene Model: October 15th, 2020
40 days agoapx7 ascorbate peroxidase7:
 
GRMZM2G047968
    Gene Product: October 15th, 2020
Gene Model: October 15th, 2020
40 days agoapx8 ascorbate peroxidase8:
 
       Gene Product: October 15th, 2020
40 days agoapx9 ascorbate peroxidase9:
 
GRMZM2G460406
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Gene Model: October 15th, 2020
40 days agoapx10 ascorbate peroxidase10:
 
GRMZM2G120517
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Gene Model: October 15th, 2020
40 days agopepr1 plant elicitor peptide receptor1:
 
GRMZM2G011806
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: July 10th, 2019
Gene Model: October 15th, 2020
40 days agopepr2 plant elicitor peptide receptor2:
 
GRMZM2G428554
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: July 10th, 2019
Gene Model: October 15th, 2020
40 days agoapx12 ascorbate peroxidase12: NCBI: similar to Arabdopsis L-ascorbate peroxidase
5.05
   Qu, CX et al. 2020. Genes 11:1204     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Variation: March 21st, 2017
40 days agodar2 monodehydroascorbate reductase2:
4.05
GRMZM2G134708
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Gene Model: April 16th, 2020
40 days agogsr2 glutathione reductase2:
5.08
GRMZM5G806449
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: September 1st, 2003
Gene Model: May 25th, 2020
40 days agocl29906_1  :
1.04
GRMZM2G057412
    Variation: September 25th, 2007
Gene Model: October 15th, 2020
42 days agogrf9 growth-regulating factor9: NCBI: growth-regulating factor 9-like
5.08 - 5.08
GRMZM5G893117
Kong, JX et al. 2020. Frontiers Plant Sci 11:572319     Reference: October 13th, 2020
Variation: March 30th, 2017
Gene Model: March 30th, 2017
45 days agoomt2 Caffeoyl CoA O-methyltransferase2:
9.02
GRMZM2G099363
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: January 5th, 2014
Variation: May 13th, 2016
Gene Model: September 17th, 2014
45 days agoAY110631  :
4.08
GRMZM2G439311
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Variation: July 29th, 2004
Gene Model: April 17th, 2018
45 days agocybc7 cytochrome b-c1 complex subunit 7: encodes an important part of the mitochondrial electron transport chain that can suppress HR mediated by Rp1-D21 in a transient expression assay
 
GRMZM2G318346
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: January 30th, 2019
Variation: January 30th, 2019
Gene Model: January 30th, 2019
45 days agopgh1 polygalacturonase gene homolog1: functions as a suppressor of programmed cell death induced by at least two autoactive NLR proteins and by two chemical inducers
 
GRMZM2G135763
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: September 1st, 2003
Variation: July 15th, 2019
Gene Model: July 15th, 2019
45 days agohsp13 heat shock protein13:
 
GRMZM2G012631
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: January 14th, 2019
Gene Model: October 10th, 2020
45 days agopk5 protein kinase5:
 
GRMZM2G144042
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: January 14th, 2019
Gene Model: October 10th, 2020
45 days agoGRMZM2G351387  :
 
GRMZM2G351387
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: January 14th, 2019
Gene Model: October 10th, 2020
45 days agoIDP343  : similar to vacuolar protein-sorting-associated protein 37-1 of A. thaliana
1.02
GRMZM2G023575
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Variation: March 31st, 2005
Gene Model: February 11th, 2019
45 days agosrph1 SGT1 disease resistance protein homolog1: interacts with RACK1 protein involved in disease resistance (Wang et al 2014)
3.09
GRMZM2G105019
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Variation: March 31st, 2005
Gene Model: March 23rd, 2015
45 days agopk3 S-domain class receptor-like kinase3:
7.03
GRMZM2G309025
Zhang, R et al. 1999. Plant Physiol 121: 685-686     Reference: October 24th, 2006
Gene Product: October 10th, 2020
Variation: May 12th, 2005
Gene Model: August 5th, 2015
46 days agoskus9 skewed root growth similar9: Similar to Monocopper oxidase-like protein SKU5 of Arabidopsis C-terminal peptide-binding protein 1
1.07
GRMZM2G438386
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Variation: September 28th, 2016
Gene Model: September 28th, 2016
46 days agolac2 laccase2:
6.05
GRMZM2G146152
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
46 days agolac10 laccase10:
 
GRMZM2G140527
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: May 6th, 2016
46 days agolac9 laccase9:
 
GRMZM2G132169
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: September 28th, 2016
46 days agolac3 laccase3:
 
GRMZM2G169033
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
46 days agolac5 laccase5:
 
GRMZM2G367668
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
46 days agolac4 laccase4:
 
GRMZM2G072780
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
46 days agolac1 laccase1:
 
GRMZM2G400390
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
46 days agolac11 laccase11:
 
GRMZM2G305526
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac12 laccase12:
 
GRMZM5G814718
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac13 laccase13:
 
GRMZM2G166857
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac14 laccase14:
 
AC234190.1_FG002
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac15 laccase15:
 
GRMZM2G072808
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac16 laccase16:
 
GRMZM5G870184
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac17 laccase17:
 
GRMZM2G309594
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac18 laccase18:
 
GRMZM2G388587
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac19 laccase19:
 
GRMZM2G320786
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac20 laccase20:
 
GRMZM5G800488
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac21 laccase21:
 
GRMZM2G447271
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac22 laccase22:
 
GRMZM2G336337
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac23 laccase23:
 
GRMZM2G094375
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
46 days agolac7 laccase7:
 
GRMZM2G400390
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 16th, 2020
46 days agoskus2 skewed root growth similar2: closest paralog to skus1 (92.31% similar)
 
GRMZM2G068682
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus3 skewed root growth similar3: 74.77% similar to skus1
 
GRMZM2G129064
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus4 skewed root growth similar4: 73.10% similar to skus1
 
GRMZM2G142584
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus6 skewed root growth similar6: 52.76% similar to skus1
 
GRMZM2G076225
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus7 skewed root growth similar7: 52.35% similar to skus1
 
GRMZM2G416509
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus8 skewed root growth similar8: 47.29% similar to skus1
 
GRMZM2G360529
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus10 skewed root growth similar10: 46.77% similar to skus1
 
GRMZM2G077317
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus11 skewed root growth similar11: 46.20% similar to skus1
 
GRMZM2G402584
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus12 skewed root growth similar12: 46.14% similar to skus1
 
GRMZM2G049693
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus13 skewed root growth similar13: 46.00% similar to skus1
 
GRMZM2G043301
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus14 skewed root growth similar14: 45.64% similar to skus1
 
GRMZM2G172642
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus15 skewed root growth similar15: 29.87% similar to skus1
 
GRMZM2G064106
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus16 skewed root growth similar16: 28.72% similar to skus1
 
GRMZM2G386170
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus17 skewed root growth similar17: 28.26% similar to skus1
 
GRMZM2G163535
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus18 skewed root growth similar18: 26.63% similar to skus1
 
GRMZM2G141376
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
46 days agoskus1 skewed root growth similar1: mutant produced small, shriveled kernels with an aberrant basal endosperm transfer layer (BETL) and placento‐chalazal (PC) layer and irregular starch granules
3.06
GRMZM2G157929
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: May 29th, 2019
Variation: October 9th, 2020
Gene Model: September 28th, 2020
46 days agoskus5 skewed root growth similar5: 52.77% similar to skus1
5.04
GRMZM2G076985
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: May 9th, 2020
47 days agomsl2 mechanosensitive channel of small conductance-like2: Class I MSL; found to be localized either in mitochondrial membrane or plastid envelop and show sequence similarity with MscS channels of bacteria
2.02
   Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Variation: November 16th, 2017
47 days agoemb5 embryo specific5: (was emb*-8518) embryo development blocked at transition to early coleoptilar stage
2.08 - 2.09
   Li, Y et al. 2020. Plant Mol Biol Rep pp.doi: 10.1007/s11105-020-01251-w     Reference: October 8th, 2020
Variation: September 1st, 2003
47 days agomsl1 mechanosensitive channel of small conductance-like1: Class I MSL; found to be localized either in mitochondrial membrane or plastid envelop and show sequence similarity with MscS channels of bacteria
 
GRMZM2G028914
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
47 days agomsl3 mechanosensitive channel of small conductance-like3: Class II MSL; predicted to be present in the plasma membrane
 
GRMZM2G027891
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
47 days agomsl4 mechanosensitive channel of small conductance-like4: Class II MSL; predicted to be present in the plasma membrane
 
GRMZM2G303244
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
47 days agomsl5 mechanosensitive channel of small conductance-like5: Class II MSL; predicted to be present in the plasma membrane
 
GRMZM2G005996
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
47 days agomsl6 mechanosensitive channel of small conductance-like6: Class II MSL; predicted to be present in the plasma membrane
 
AY530952.1_FG001
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
47 days agomsl7 mechanosensitive channel of small conductance-like7: Class II MSL; predicted to be present in the plasma membrane
 
GRMZM2G005013
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
47 days agomsl8 mechanosensitive channel of small conductance-like8: Class II MSL; predicted to be present in the plasma membrane
 
GRMZM2G090627
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
48 days agoals2 acetolactate synthase2: sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide inhibition kineticsSecond band mapped to this site. Acetolactate pyruvate-lyase from tobacco used as the dup(als2) probe
5.04
GRMZM2G143008
Jiang, Y-Y et al. 2020. Genome Biol 21:257     Reference: October 7th, 2020
Gene Product: September 1st, 2003
Variation: October 7th, 2020
Gene Model: July 27th, 2016
48 days agoals1 acetolactate synthase1: sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide inhibition kinetics
4.05
   Jiang, Y-Y et al. 2020. Genome Biol 21:257     Reference: October 7th, 2020
Gene Product: September 1st, 2003
Variation: October 7th, 2020
49 days agornrs3 ribonucleotide reductase small subunit3: similar to Ribonucleoside-diphosphate reductase small chain C of A. thaliana
2.04
GRMZM2G323679
Xie, SY et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00219     Reference: October 6th, 2020
Gene Product: October 6th, 2020
Gene Model: February 19th, 2019
49 days agopebp15 phosphatidylethanolamine-binding protein15:
 
   Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Variation: December 15th, 2010
49 days agoglb1 globulin1: was prot1; electrophoretic mobility, null allele is known; embryo protein; SSRs phi011, 055, 094
1.09
   Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: September 1st, 2003
Variation: January 29th, 2015
49 days agosh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
   Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: October 25th, 2006
Variation: June 9th, 2020
49 days agosalt1 SalT homolog1: gene transcript associated with vascular cells localized around phloem cells; function unknown;
10.02
GRMZM2G142891
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: September 1st, 2003
Variation: January 9th, 2018
Gene Model: December 12th, 2017
49 days agoumc1346  :
4.05
GRMZM2G366392
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Variation: September 1st, 2003
Gene Model: June 7th, 2018
49 days agoumc1742  :
3.04
GRMZM2G114552
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Variation: September 1st, 2003
Gene Model: April 2nd, 2018
49 days agopho1 starch phosphorylase1: amyloplast starch phosphorylase
1.10
GRMZM2G074158
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: March 26th, 2015
Gene Model: March 26th, 2015
49 days agonip2c NOD26-like membrane intrinsic protein2:
9.01
GRMZM2G081239
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 3rd, 2015
49 days agohsp18a 18 kda heat shock protein18a: induced by heat shock specifically in anthers or spikelets containing meitotic microsporocytes
9.04 - 9.05
GRMZM5G899188
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: September 1st, 2003
Variation: June 27th, 2014
Gene Model: June 27th, 2014
49 days agofht2 flavanone 3-hydroxylase2:
1.04
GRMZM2G382569
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: June 8th, 2012
Gene Model: June 7th, 2017
49 days agobrs1 brassinosteroid synthesis1:
1.03
GRMZM2G065635
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386   AT3G50660 (TAIR) Reference: October 6th, 2020
Gene Product: September 20th, 2010
Variation: November 7th, 2013
Gene Model: October 3rd, 2012
49 days agoipt2 isopentenyl transferase2: encodes an isopentenyl transferase
 
GRMZM2G084462
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: March 19th, 2014
Variation: July 11th, 2013
Gene Model: July 10th, 2013
49 days agorca3 RUBISCO activase3: encodes alpha form of RUBISCO activase
 
GRMZM2G162200
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Gene Product: October 28th, 2014
Gene Model: February 11th, 2014
49 days agoubi3 ubiquitin3: candidate gene for major plant and ear height QTL
 
GRMZM2G014119
Chen, SY et al. 2020. BMC Genomics 21:689   AT1G31340 (TAIR) Reference: October 6th, 2020
Gene Product: September 1st, 2003
Gene Model: December 28th, 2016
49 days agompkl1 MAP kinase-like1: encodes a functional kinase that mediates the response of maize seedlings to drought by regulating ABA homeostasis
 
GRMZM2G108829
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Gene Product: May 13th, 2014
Variation: December 21st, 2019
Gene Model: December 21st, 2019
49 days agornrs1 ribonucleotide reductase small subunit1:
 
GRMZM2G060163
Xie, SY et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00219     Reference: October 6th, 2020
Gene Product: October 6th, 2020
Gene Model: October 6th, 2020
49 days agornrl2 ribonucleotide reductase large subunit2:
 
GRMZM2G340527
Xie, SY et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00219     Reference: October 6th, 2020
Gene Product: October 6th, 2020
Gene Model: October 6th, 2020
49 days agornrs2 ribonucleotide reductase small subunit2:
 
GRMZM2G155546
Xie, SY et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00219     Reference: October 6th, 2020
Gene Product: October 6th, 2020
Gene Model: October 6th, 2020
49 days agornrl1 ribonucleotide reductase large subunit1: mutant has a thermosensitive vanishing tassel phenotype
 
GRMZM2G304362
Xie, SY et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00219     Reference: October 6th, 2020
Gene Product: October 6th, 2020
Variation: October 6th, 2020
Gene Model: October 6th, 2020
49 days agoIDP49  :
3.05
GRMZM2G136262
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Variation: March 31st, 2005
Gene Model: February 24th, 2019
49 days agobetl9 basal endosperm transfer layer9: endosperm transfer cell specific protein regulated by mrp1 myb related protein1; RFLP gpm92
3.05
GRMZM2G087413
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: September 1st, 2003
Variation: October 8th, 2009
Gene Model: July 4th, 2014
49 days agocol15 C2C2-CO-like-transcription factor 1:
1.04
GRMZM2G134671
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
49 days agopsei8 cystatin8:
1.04
GRMZM2G401374
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: July 28th, 2016
49 days agofps1 farnesyl pyrophosphate synthase1: endosperm cDNA sequence; two copies detected; up-regulated in endosperm mutants, o2 and fl2 (Li et al. 1996).
8.03
GRMZM2G168681
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: August 18th, 2015
Variation: May 9th, 2009
Gene Model: April 8th, 2013
50 days agoptf1 Pi starvation-induced transcription factor1: single copy, may be involved in regulating carbohydrate metabolism
9.01 - 9.02
GRMZM2G024530
Wang, QJ et al. 2019. Plant Genome 12:190039   LOC_Os02g35660 (MSU/TIGR)
Os02g0564700 (Gramene)
Reference: October 5th, 2020
Gene Product: September 14th, 2016
Variation: April 23rd, 2011
Gene Model: April 19th, 2011
Recommended by Maria Katherine Mejia-Guerra:
April 18th, 2011
50 days agoms6021 male sterile6021: mutants are male sterile; encodes a fatty-acyl-CoA reductase
9.04 - 9.06
GRMZM2G120987
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: December 1st, 2017
Variation: December 1st, 2017
Gene Model: December 1st, 2017
50 days agoms26 male sterile26: tapetal cells abnormal, die early; microspores vacuolate early and abort after the tetrad stage
1.02 - 1.02
   Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 30th, 2013
Variation: July 8th, 2020
50 days agoms10 male sterile10: like ms5; affected at microspore vacuolationsimilar to Arabidopsis cytochrome P450, family 703, subfamily A, polypeptide 2
10.04 - 10.05
GRMZM5G830329
Zhang, HS et al. 2020. Plant Genome 13:e20022   AT1G01280 (TAIR)
LOC_Os08g03682 (MSU/TIGR)
Reference: October 5th, 2020
Gene Product: January 20th, 2017
Variation: January 19th, 2017
Gene Model: January 19th, 2017
50 days agorf2 restorer of fertility2: see rf1; cDNA prf2a complements E. coli mutant deficient in aldehyde dehydrogenase; mitochondrial
9.03
   Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 1st, 2003
Variation: December 18th, 2006
50 days agorps27c ribosomal protein S27c:
5.01
GRMZM2G132121
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Variation: March 14th, 2015
Gene Model: March 14th, 2015
50 days agoumc1367  :
10.03
GRMZM2G037378
Wang, QJ et al. 2019. Plant Genome 12:190039     Reference: October 5th, 2020
Variation: September 1st, 2003
Gene Model: December 13th, 2017
50 days agoumc1509  : NCBI: similar to Arabidopsis PATATIN-like protein 5
4.02
GRMZM2G154523
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Variation: May 16th, 2017
Gene Model: May 16th, 2017
50 days agoumc1597  :
5.03
GRMZM2G124791
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Variation: September 1st, 2003
Gene Model: June 19th, 2018
50 days agoglct1 glucose translocator1:
8.02
GRMZM2G153704
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 1st, 2003
Variation: May 30th, 2014
Gene Model: August 23rd, 2014
50 days agocmu1 chorismate mutase1: function largely predicted; protein heterodimerizes with fungal chorismate mutase
8.08
GRMZM2G116087
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: February 12th, 2014
Gene Model: February 12th, 2014
50 days agopdi6 protein disulfide isomerase6:
3.04
GRMZM2G128171
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 1st, 2003
Variation: December 30th, 2015
Gene Model: December 18th, 2015
50 days agopdi7 protein disulfide isomerase7:
6.05
GRMZM2G159369
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 1st, 2003
Variation: January 7th, 2016
Gene Model: December 18th, 2015
50 days agoalt7 alanine aminotransferase7: bundle sheath alanine transasminase; see also alt8, alt9
7.00
GRMZM2G120563
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: October 2nd, 2020
Gene Model: September 4th, 2018
50 days agoaox2 alternative oxidase2: primers give PCR product closely similar to alternative oxidase in other species
 
GRMZM2G125669
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: February 22nd, 2012
Variation: March 1st, 2012
Gene Model: February 17th, 2012
50 days agophos2 phosphate transporter2:
 
GRMZM2G466545
Wang, QJ et al. 2019. Plant Genome 12:190039   AT3G23430 (TAIR) Reference: October 5th, 2020
Gene Product: February 27th, 2016
Variation: February 27th, 2016
Gene Model: February 27th, 2016
50 days agohak22 potassium high-affinity transporter22:
 
GRMZM2G409771
Wang, QJ et al. 2019. Plant Genome 12:190039     Reference: October 5th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
50 days agotk1 transketolase 1:
9.03
GRMZM2G033208
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: March 11th, 2008
Variation: January 29th, 2011
Gene Model: December 21st, 2015
52 days agoakin2 AKINbetagamma-1 protein kinase2:
1.03
   Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: December 31st, 2018
Variation: September 25th, 2007
52 days agotrps2 trehalose-6-phosphate synthase2:
1.03
GRMZM2G099860
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: February 11th, 2019
52 days agora3 ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis
7.06
   Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Variation: December 3rd, 2010
52 days agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
   Gentzel, IN et al. 2020. Plant Methods 16:133     Reference: October 3rd, 2020
Gene Product: December 13th, 2011
Variation: March 4th, 2014
52 days agohb71 Homeobox-transcription factor 71: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Fang, P et al. 2020. Plant Mol Biol Rep pp.doi: 10.1007/s11105-020-01252-9     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
52 days agotrpp4 trehalose-6-phosphate phosphatase4: double mutants with ra3 give a more extreme phenotype
4.08
GRMZM2G151044
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Variation: April 2nd, 2019
Gene Model: June 7th, 2018
52 days agohb91 Homeobox-transcription factor 91: Tests with B-A translocations indicated that this probe did not map to chromosomes 4L or 6L.NCBI: Homeodomain leucine zipper family IV proteinLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.07
GRMZM2G122897
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: October 3rd, 2020
Variation: April 25th, 2017
Gene Model: April 25th, 2017
52 days agotrpp11 trehalose-6-phosphate phosphatase11:
9.01
GRMZM2G080354
Figueroa, D; Bass, HW. 2012. Cell Chromosome Res. 20:363-80     Reference: July 18th, 2014
Gene Product: October 3rd, 2020
Variation: September 1st, 2003
Gene Model: March 2nd, 2018
52 days agotrps1 trehalose-6-phosphate synthase1:
 
GRMZM2G068943
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: May 28th, 2012
52 days agotre1 trehalase1:
 
GRMZM2G162690
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
52 days agotrpp1 trehalose-6-phosphate phosphatase1: similar to haloacid dehalogenase-like hydrolase domain-containing protein of A. thaliana
 
GRMZM2G347280
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrpp2 trehalose-6-phosphate phosphatase2:
 
GRMZM2G140078
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrpp3 trehalose-6-phosphate phosphatase3:
 
GRMZM2G117564
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrpp5 trehalose-6-phosphate phosphatase5:
 
GRMZM2G059840
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrpp7 trehalose-6-phosphate phosphatase7:
 
GRMZM2G055150
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrpp8 trehalose-6-phosphate phosphatase8:
 
GRMZM2G174396
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrpp9 trehalose-6-phosphate phosphatase9:
 
GRMZM5G840145
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrpp12 trehalose-6-phosphate phosphatase12:
 
GRMZM2G178546
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps3 trehalose-6-phosphate synthase3:
 
GRMZM2G079928
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps4 trehalose-6-phosphate synthase4:
 
GRMZM2G008226
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps5 trehalose-6-phosphate synthase5:
 
GRMZM2G527891
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps6 trehalose-6-phosphate synthase6:
 
GRMZM2G304274
Acosta-Perez, P et al. 2020. Plants 9:315     Reference: March 3rd, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps7 trehalose-6-phosphate synthase7:
 
GRMZM2G123277
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps8 trehalose-6-phosphate synthase8: similar to alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 of A. thaliana
 
GRMZM2G007736
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps9 trehalose-6-phosphate synthase9:
 
GRMZM2G366659
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps10 trehalose-6-phosphate synthase10:
 
GRMZM2G312521
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps11 trehalose-6-phosphate synthase11:
 
GRMZM2G122231
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps12 trehalose-6-phosphate synthase12: similar to alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 of A. thaliana
 
GRMZM2G133966
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: March 19th, 2019
52 days agotrps13 trehalose-6-phosphate synthase13:
 
GRMZM2G019183
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps14 trehalose-6-phosphate synthase14:
 
GRMZM2G416836
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agotrps15 trehalose-6-phosphate synthase15:
 
GRMZM2G118462
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
52 days agosnrk1a2 SNF1-related kinase alpha1-like2:
 
GRMZM2G180704
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: December 31st, 2018
Gene Model: February 13th, 2014
52 days agotrpp13 trehalose-6-phosphate phosphatase13:
 
GRMZM5G890599
Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: October 3rd, 2020
Gene Model: April 2nd, 2019
52 days agotrpp14 trehalose-6-phosphate phosphatase14:
 
   Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: October 3rd, 2020
52 days agotrpp6 trehalose-6-phosphate phosphatase6: similar to Arabidopsis haloacid dehalogenase-like hydrolase domain-containing protein
5.06
GRMZM2G112830
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: February 7th, 2018
52 days agosnrk1a1 SNF1-related kinase alpha1-like1:
6.06
GRMZM2G077278
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: December 31st, 2018
Gene Model: February 7th, 2018
53 days agoarftf9 ARF-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
   Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: September 25th, 2007
53 days agoarftf25 ARF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.06
GRMZM2G116557
Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: August 22nd, 2017
Gene Model: August 22nd, 2017
53 days agoarftf18 ARF-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
GRMZM2G035405
Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: September 1st, 2003
Gene Model: June 23rd, 2018
53 days agoalt1 L-alanine:2-oxoglutarate aminotransferase1: electrophoretic mobility; alt1 and alt2 interact to form heterodimers
 
   Watson, NR et al. 1992. Biochem Genet 30:371-383     Reference: September 1st, 2003
Gene Product: October 2nd, 2020
53 days agoalt2 L-alanine:2-oxoglutarate aminotransferase2: electrophoretic mobility; alt1 and alt2 interact to form heterodimers
 
   Watson, NR et al. 1992. Biochem Genet 30:371-383     Reference: September 1st, 2003
Gene Product: October 2nd, 2020
53 days agoalt3 L-alanine:2-oxoglutarate aminotransferase3: electrophoretic mobility
 
   Watson, NR et al. 1992. Biochem Genet 30:371-383     Reference: September 1st, 2003
Gene Product: October 2nd, 2020
53 days agoarftf16 ARF-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: January 10th, 2020
53 days agoarftf31 ARF-transcription factor 31: plays a key role in low P responses and root architecture regulationLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: August 7th, 2016
53 days agoalt4 L-alanine:2-oxoglutarate aminotransferase4: the relationship between alt4 and previously reported genes alt1, alt2 or alt3 is not clear as sequences for the latter were not published;
5.03
GRMZM2G088064
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: October 2nd, 2020
Variation: February 26th, 2010
Gene Model: July 23rd, 2014
53 days agoalt5 alanine aminotransferase5: putative alanine aminotransferase; found in embryo (Davidson 2011), not reported in seedling leaf (Tausta et al 2014)
7.02
GRMZM2G117230
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: October 2nd, 2020
Gene Model: July 16th, 2020
53 days agoalt8 alanine amino transferase8: bundle sheath alanine transaminase; see also alt7 and alt9
 
GRMZM5G840582
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: October 2nd, 2020
Gene Model: July 23rd, 2014
53 days agoalt10 alanine aminotransferase10: putative alanine aminotransferase weakly expressed in seedling leaf (Tausta et al 2014)
 
GRMZM2G124963
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: October 2nd, 2020
Variation: February 20th, 2019
Gene Model: August 1st, 2014
53 days agoalt11 alanine aminotransferase11:
 
GRMZM2G088018
    Gene Product: October 2nd, 2020
Gene Model: July 16th, 2020
53 days agoalt12 alanine aminotransferase12: heat responsive gene
 
GRMZM5G828630
Yao, QL; Di, S-Z. 2020. Intl J Agric Biol 23:475-483     Reference: July 22nd, 2020
Gene Product: October 2nd, 2020
Gene Model: July 22nd, 2020
53 days agosi3 silky3: mutants have silky ears and tassels; up regulated in mutant plants
 
AC209624.2_FG001
Luo, HS et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00043     Reference: October 1st, 2020
Gene Product: October 2nd, 2020
Variation: October 2nd, 2020
Gene Model: October 1st, 2020
53 days agoalt9 alanine aminotransferase9: putative leaf alanine transminase
7.04
GRMZM2G053999
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: October 2nd, 2020
Variation: January 13th, 2015
Gene Model: July 23rd, 2014
54 days agomyb53 MYB-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.09
   Han, QH et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12864     Reference: October 1st, 2020
Variation: September 25th, 2007
54 days agogdcp1 glycine decarboxylase1: cDNA sequences, SSR umc1526
10.01
GRMZM2G104310
Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: September 1st, 2003
Variation: October 6th, 2015
Gene Model: October 6th, 2015
54 days agobx4 benzoxazinone synthesis4: endoplasmic reticulum P450 monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; NAM SNP PHM1184
4.01
GRMZM2G172491
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
54 days agorca1 RUBISCO activase1: single copy leaf cDNA csu901 smilar to RUBISCO activaseencodes the beta form of RUBISCO activase
4.00
GRMZM2G162282
Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: October 28th, 2014
Variation: September 1st, 2003
Gene Model: February 11th, 2014
54 days agocsu634  : protein phosphatase 2C-like (Alexandrov et al.)
9.05
GRMZM2G006429
Han, QH et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12864     Reference: October 1st, 2020
Variation: April 20th, 2017
Gene Model: April 20th, 2017
54 days agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
GRMZM2G307119
Luo, HS et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00043   At5g18560 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os07g0669500 (Gramene)
Reference: October 1st, 2020
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
54 days agoc1 colored aleurone1: C1 colored; C1-I dominant colorless; c1 colorless, includes c1-p (pigment inducible by light at germination), c1-n (not inducible)
9.01
   Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: June 16th, 2015
Variation: March 27th, 2013
54 days agocat2 catalase2: electrophoretic mobility; null allele is known; cytosolic/glyoxysomal; tetrameric; intra/interlocus hybrid bands occur
1.01
   Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: September 1st, 2003
Variation: September 21st, 2012
54 days agogo1 glycolate oxidase1: seedling lethal necrotic unless supplied high CO2; photorespiration.
 
GRMZM2G129246
Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: June 26th, 2009
Variation: April 4th, 2011
Gene Model: January 12th, 2016
54 days agopdk2 pyruvate, orthophosphate dikinase2: cytosolic
8.04
GRMZM2G097457
Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: July 28th, 2014
Variation: December 19th, 2017
Gene Model: November 21st, 2012
54 days agompk2 MAP kinase2: functions in brassinosteroid signaling in antioxidant defense (Zhang et al 2010) cDNA sequence; single copy (Berberich et al 1999)
9.02
GRMZM2G020216
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
54 days agomyb8 myb transcription factor8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G041415
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: February 16th, 2011
Variation: February 16th, 2011
Gene Model: July 28th, 2016
54 days agozmm14 Zea mays MADS14: during spikelet development zmm4 probably works as a selector gene which is involved in distinguishing the upper and lower floret
1.02
GRMZM2G099522
Luo, HS et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00043     Reference: October 1st, 2020
Variation: August 28th, 2013
Gene Model: August 14th, 2017
54 days agotcptf31 TCP-transcription factor 31: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: September 27th, 2019
54 days agosimk1 salt-induced MAP kinase1:
 
GRMZM2G127141
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 12th, 2013
Gene Model: July 12th, 2013
54 days agobx7 benzoxazinone synthesis7: cytosolic O-methyl transferase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc2039, INDEL IDP478.
4.03
GRMZM2G441753
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 31st, 2011
Variation: October 26th, 2011
Gene Model: October 19th, 2011
54 days agobx3 benzoxazinone synthesis3: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1017
4.01
GRMZM2G167549
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 19th, 2011
Variation: November 12th, 2013
Gene Model: October 24th, 2011
54 days agobx5 benzoxazinone synthesis5: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1276.
4.01
GRMZM2G063756
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
54 days agobx2 benzoxazinone synthesis2: endoplasmic reticulum P450 monoxygenase; synthesis cyclic hyroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1164, umc1682
4.01
GRMZM2G085661
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: April 8th, 2013
Variation: April 12th, 2019
Gene Model: October 24th, 2011
54 days agobde1 bearded-ear1: floral development MADS box transcription factor; recessive mutant has silky-polytypic-like ear
5.06
   Luo, HS et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00043   AT2G45650 (TAIR) Reference: October 1st, 2020
Gene Product: April 1st, 2011
Variation: October 5th, 2009
54 days agosbp3 (GRASSIUS) SBP-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.03
GRMZM2G106798
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 5th, 2019
Gene Model: June 11th, 2018
54 days agosi1 silky1: (aka ts8, ms-si) multiple silks in ear; sterile tassel with silks
6.01
   Luo, HS et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00043     Reference: October 1st, 2020
Variation: November 2nd, 2015
54 days agofgs1 ferredoxin-dependent glutamate synthase1: deduced amino acid sequence homologous with E. coli NADPH-glutamate synthase, single copy by Southern blot analysis
7.05
   Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: September 1st, 2003
Variation: July 24th, 2015
54 days agobx8 benzoxazinone synthesis8: cytosolic glucosyltransferase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
4.01
GRMZM2G085054
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 20th, 2011
Variation: October 31st, 2011
Gene Model: October 20th, 2011
54 days agobx9 benzoxazinone synthesis9: cytosolic glucosyl transferase; redundant with bx8; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
1.06
GRMZM2G161335
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 20th, 2011
Variation: October 27th, 2011
Gene Model: October 20th, 2011
54 days agompk7 MAP kinase7:
 
GRMZM2G002100
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
54 days agopin10 PIN-formed protein10: similar to Arabidopsis PIN10 (Forestan et al 2012)
 
GRMZM2G126260
Han, QH et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12864     Reference: October 1st, 2020
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
54 days agobx10 benzoxazinone synthesis10:
 
GRMZM2G311036
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
54 days agobx11 benzoxazinone synthesis11:
 
GRMZM2G336824
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
54 days agobx12 benzoxazinone synthesis12:
 
GRMZM2G023325
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 8th, 2013
Variation: July 8th, 2013
Gene Model: July 8th, 2013
54 days agobx13 benzoxazinone synthesis13: encodes a 2-oxoglutarate-dependent dioxygenase that catalyzes the conversion of DIMBOA-Glc into a new benzoxazinoid intermediate (TRIMBOA-Glc) by an uncommon reaction involving a hydroxylation and a likely ortho-rearrangement of a methoxy group.
 
AC148152.3_FG005
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: June 20th, 2016
Variation: June 20th, 2016
Gene Model: June 20th, 2016
54 days agobx6 benzoxazinone synthesis6: cytosolic 2-oxoglutarate-dependent dioxygenase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1232
4.01
   Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: June 20th, 2016
Variation: April 12th, 2019
54 days agompk3 MAP kinase3: transcript and protein activity upregulated by ABA and H2O2
1.03
GRMZM2G017792
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013
55 days agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
   Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: August 25th, 2017
Variation: June 29th, 2005
55 days agoga2ox6 gibberellin 2-oxidase6:
6.05
   Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: October 27th, 2014
55 days agorf3 restorer of fertility3: dominant Rf3 restores fertility to cms-S
2.09
   Qin, XN et al. 2020. PeerJ doi: 10.7717/peerj.10015     Reference: September 30th, 2020
Gene Product: December 27th, 2016
Variation: September 1st, 2003
55 days agoremo4 remorin4:
7.04
GRMZM2G081949
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Variation: September 1st, 2003
Gene Model: September 11th, 2018
55 days agohsftf4 HSF-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: May 15th, 2020
55 days agoumc1653  :
6.07
GRMZM2G438895
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Variation: September 1st, 2003
Gene Model: August 30th, 2018
55 days agopsan2 photosystem I N subunit2:
10.03
GRMZM2G009048
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2018
55 days agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
   Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: August 25th, 2017
Variation: February 20th, 2015
55 days agonac1 NaCl stress protein1: encodes small plama membrane proteolipid involved in ion homeostasis, and response to salinity
10.04
   Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
55 days agomsh1 male sterile protein homolog1: leaf cDNA 6C06C01, similar to Arabidopsis MS2
4.08
GRMZM2G036217
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 4th, 2015
55 days agohsp7 heat shock protein7:
 
GRMZM5G802801
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
55 days agotir2 transport inhibitor response2:
 
GRMZM2G155849
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: July 25th, 2017
Gene Model: May 29th, 2019
55 days agorf10 restoration of fertility10: dominant Rf10 restores fertility to cms-S
 
   Qin, XN et al. 2020. PeerJ doi: 10.7717/peerj.10015     Reference: September 30th, 2020
Variation: September 30th, 2020
55 days agohis401 histone H4 family1:
 
GRMZM2G073275
Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
55 days agohis402 histone H4 family2:
 
GRMZM2G084195
Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
55 days agohis403 histone H4 family3:
 
GRMZM2G421279
Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
55 days agohis404 histone H4 family4:
 
GRMZM2G072855
Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
55 days agohis406 histone H4 family6:
 
GRMZM2G181153
Philipps, G et al. 1986. Gene 42:225-229     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
55 days agohis301 histone H3 family1:
 
GRMZM2G401581
Chaubet, N. 1986. Plant Mol Biol 6:253-263     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
55 days agohis407 histone H4 family7:
 
GRMZM2G349651
Philipps, G et al. 1986. Gene 42:225-229     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
56 days agoacc2 acetyl-CoA carboxylase2: graminicide (e.g., sethoxydim, haloxyfop) resistance; encodes acetyl-CoA carboxylase
2.04
GRMZM5G858094
Le Corre, V et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2006633117     Reference: September 29th, 2020
Gene Product: September 29th, 2020
Variation: July 7th, 2012
Gene Model: July 7th, 2012
56 days agocchh35 Cys2His2 Zinc Finger35: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.02
GRMZM2G068710
Matonyei, TK, et al. 2020. Sci. Rep.. 10:7320     Reference: September 29th, 2020
Gene Product: December 6th, 2019
Gene Model: January 23rd, 2018
56 days agoacc1 acetyl-coenzyme A carboxylase1: tissue-culture selected resistance to cyclohexanedione (e.g., sethoxydim) and aryloxy phenoxypropionate (e.g., haloxyfop) herbicides; encodes acetyl-CoA carboxylase
10.04
AC197672.3_FG002
Le Corre, V et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2006633117     Reference: September 29th, 2020
Gene Product: September 1st, 2003
Variation: July 6th, 2012
Gene Model: July 7th, 2012
56 days agoms7 male sterile7: like ms2; tapetal cell dysfunction
7.02
GRMZM5G890224
An, XL, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2010255117   AT5G22260 (TAIR)
LOC_Os09g27620 (MSU/TIGR)
Os09g0449000 (Gramene)
Reference: September 29th, 2020
Gene Product: July 8th, 2017
Variation: September 9th, 2020
Gene Model: July 6th, 2017
56 days agop1 pericarp color1: dominant P1 regulates red pigment (phlobaphenes) in cob and pericarp (ex. P1-wr red cob; P1-rr red pericarp and cob) and in tassel glumes and husks; tissue-specific allele variations; SSR phi095; myb homologue
1.03
   Su, W et al. 2020. Genetics pp.doi: 10.1534/genetics.120.303592     Reference: September 29th, 2020
Gene Product: October 13th, 2010
Variation: September 29th, 2020
56 days agomate1 multidrug and toxic compound extrusion1: confers aluminum tolerance in lines that carry 3 adjacent identical copies of the mate1 gene (Maron et al 2013)
 
GRMZM5G870170
Matonyei, TK, et al. 2020. Sci. Rep.. 10:7320     Reference: September 29th, 2020
Gene Product: August 17th, 2015
Variation: March 19th, 2013
Gene Model: March 19th, 2013
56 days agop2 pericarp color2: nearly identical to p1, active in anther and silk but does not determine pericarp color; SSR's umc2096, umc2097.
1.03
GRMZM2G057027
Su, W et al. 2020. Genetics pp.doi: 10.1534/genetics.120.303592     Reference: September 29th, 2020
Variation: September 29th, 2020
Gene Model: August 6th, 2014
56 days agomate6 multidrug and toxic compound extrusion6: Sorghum ortholog: Sb04g001840
 
GRMZM2G065154
Matonyei, TK, et al. 2020. Sci. Rep.. 10:7320   LOC_Os02g02980 (MSU/TIGR) Reference: September 29th, 2020
Gene Product: August 17th, 2015
Gene Model: August 17th, 2015
56 days agonrat2 nramp aluminum transporter2: 81.8% sequence identity with OsNrat1, an Al3+ transporter involved in rice Al tolerance (Matonyei et al., 2020)
 
GRMZM2G168747
Matonyei, TK, et al. 2020. Sci. Rep.. 10:7320     Reference: September 29th, 2020
Gene Product: August 17th, 2015
Gene Model: May 1st, 2020
57 days agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Luo, MJ et al. 2020. Sci. Rep. 10:15851     Reference: September 28th, 2020
Gene Product: June 4th, 2008
Variation: September 28th, 2020
57 days agoAI714716  :
3.09
GRMZM2G418515
    Variation: July 29th, 2004
Gene Model: September 28th, 2020
57 days agoaldr1 aldose reductase1: Expression reduced under drought or salt treatment
3.06
GRMZM2G479423
de Sousa, SM et al. 2009. Plant Physiol Biochem 47:98-104     Reference: September 28th, 2020
Gene Product: September 28th, 2020
Gene Model: September 28th, 2020
59 days agoincw1 cell wall invertase1: full-length cDNA, similar to tobacco and carrot cell-wall invertase; Northerns specific to cell suspension and developing endosperm 28-32 DAP; expressed protein cross-reacts with antibodies to carrot cell-wall invertase; low copy number
5.04
   Niu, LJ et al. 2020. Frontiers Plant Sci 11:576385     Reference: September 26th, 2020
Gene Product: June 12th, 2018
Variation: May 27th, 2015
59 days agoacp1 acid phosphatase1: electrophoretic mobility; cytosolic; dimericencodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
9.03
AC211394.4_FG004
Niu, LJ et al. 2020. Frontiers Plant Sci 11:576385     Reference: September 26th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2016
59 days agovp9 viviparous9: (was y7, z1, zds1) like vp2; vp9-4889 dormant, pale aleurone, pale green seedling
7.02
GRMZM2G454952
Wang, MP et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.09.025     Reference: September 26th, 2020
Gene Product: December 13th, 2011
Variation: September 26th, 2020
Gene Model: March 24th, 2017
59 days agocdo1081a  : probed with an oat leaf cDNA.
1.01
GRMZM2G119494
Niu, LJ et al. 2020. Frontiers Plant Sci 11:576385     Reference: September 26th, 2020
Variation: May 3rd, 2016
Gene Model: May 3rd, 2016
59 days agoaed3 aspartyl protease3: may be involved in the systemic acquired resistance against fungal invasion; expression increases during infection with Ustilago maydis.
 
GRMZM2G024099
Niu, LJ et al. 2020. Frontiers Plant Sci 11:576385     Reference: September 26th, 2020
Gene Product: September 26th, 2020
Gene Model: September 26th, 2020
60 days agobnk*-N1519C brown kernelN1519C: brown floury wrinkled defective kernel
1.00 - 1.05
   Neuffer, MG. 1994. Personal communication     Reference: September 1st, 2003
Variation: September 25th, 2020
62 days agopsy2 phytoene synthase2: single copy cDNA, csu572, similar to tomato phytoene synthase; carotenoid biosynthesis
8.07
GRMZM2G149317
Du, KT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00903     Reference: September 23rd, 2020
Gene Product: December 14th, 2011
Variation: May 12th, 2013
Gene Model: June 8th, 2012
62 days agorpd3 RPD3 histone deacetylase homolog: cDNA complements yeast rpd3, multiple copy, SSR umc1173.
4.09
GRMZM2G172883
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: November 11th, 2014
Gene Model: November 6th, 2014
62 days agotha1 thylakoid assembly1: Required for thylakoid protein targeting via the cpSec pathway. SecA homolog. (A. Barkan, 2015)pale green, high chlorophyll fluorescence, seedling lethat; thylakoid protein targeting by sec pathway
3.04
GRMZM5G880102
Yan, Z et al. 2020. Planta 252:60   AT4G01800 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os01g0321300 (Gramene)
Reference: September 23rd, 2020
Gene Product: July 22nd, 2009
Variation: June 25th, 2004
Gene Model: April 3rd, 2020
62 days agohdac9 histone deacetylase9:
 
GRMZM2G057044
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: September 1st, 2003
Gene Model: February 12th, 2020
62 days agozip5 zinc-regulated, iron-regulated transporter-like protein5:
6.04
GRMZM2G064382
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Variation: September 1st, 2003
Gene Model: August 25th, 2018
62 days agomet2 DNA methyl transferase2:
10.06
GRMZM2G025592
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: November 13th, 2018
Gene Model: November 16th, 2011
62 days agomet5 DNA methyl transferase5:
2.02
GRMZM2G005310
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
62 days agomet3 DNA methyl transferase3:
9.07
   Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: February 13th, 2016
62 days agomet7 DNA methyl transferase7:
1.01
   Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: December 22nd, 2014
62 days agohda102 histone deacetylase:
2.04
GRMZM2G119703
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: May 28th, 2011
Gene Model: November 6th, 2014
62 days agohda108 histone deacetylase: mutant plants exhibit many developmental defects: significant reduction in plant height, alterations of shoot and leaf development, alterations of inflorescence patterning and fertility
4.05
   Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: September 1st, 2003
Variation: February 1st, 2018
62 days agohda109 histone deacetylase:
2.08
GRMZM2G457889
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: November 11th, 2014
Gene Model: November 11th, 2014
62 days agohda110 histone deacetylase:
7.01
GRMZM2G107309
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: September 1st, 2003
Gene Model: November 6th, 2014
62 days agohdt102 histone deacetylase102:
8.05
GRMZM2G100146
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: November 25th, 2008
Gene Model: July 27th, 2016
62 days agohdt103 histone deacetylase103:
6.07
GRMZM2G159032
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: November 25th, 2008
Gene Model: July 27th, 2016
62 days agopht2 phosphate transporter protein2:
1.08
GRMZM2G154090
Xu, YJ et al. 2020. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2020.09.039     Reference: September 23rd, 2020
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
62 days agozip1 zinc-regulated, iron-regulated transporter-like protein1:
 
GRMZM2G001803
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
62 days agozip2 zinc-regulated, iron-regulated transporter-like protein2:
 
   Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
62 days agozip3 zinc-regulated, iron-regulated transporter-like protein3:
 
GRMZM2G045849
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
62 days agozip4 zinc-regulated, iron-regulated transporter-like protein4:
 
GRMZM2G111300
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
62 days agozip6 zinc-regulated, iron-regulated transporter-like protein6:
 
GRMZM2G034551
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
62 days agozip7 zinc-regulated, iron-regulated transporter-like protein7:
 
GRMZM2G015955
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
62 days agozip8 zinc-regulated, iron-regulated transporter-like protein8:
 
GRMZM2G093276
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
62 days agoirt1 iron-regulated transporter1:
 
GRMZM2G118821
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
62 days agomet4 DNA methyl transferase4:
8.05
GRMZM2G157589
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: February 10th, 2010
Gene Model: December 22nd, 2014
62 days agopsy3 phytoene synthase3: induced by salt and drought but not ABA; complements bacterial PSY deficiency (Li et al 2008)
7.03
   Du, KT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00903     Reference: September 23rd, 2020
Gene Product: December 14th, 2011
Variation: October 8th, 2008
63 days agoms33 male sterile33:
2.09
GRMZM2G070304
Zhu, TT et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.09.013   LOC_Os11g45400 (MSU/TIGR) Reference: September 22nd, 2020
Gene Product: March 25th, 2019
Variation: December 4th, 2018
Gene Model: March 17th, 2018
63 days agolu1 lutescent1: pale yellow green leaves with lu2
5.01 - 5.03
   Shortess, DK et al. 1968. Genetics 58:227-235     Reference: September 1st, 2003
Variation: September 22nd, 2020
63 days agolu2 lutescent2: pale green seedling leaves with lu1; becoming yellow at maturity
 
   Shortess, DK et al. 1968. Genetics 58:237-248     Reference: September 1st, 2003
Variation: September 22nd, 2020
63 days agonpf1 nitrate transporter/peptide transporter family1: encodes a low-affinity nitrate transporter with efflux activity; switches to a high-affinity chloride selective transporter, when supplied chloride.
10.03
GRMZM2G086496
Wang, X et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00361   AT1G12110 (TAIR) Reference: September 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
64 days agomads67 MADS-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
GRMZM2G147716
Zhang, C et al. 2020. Genomics pp.doi: 10.1016/j.ygeno.2020.09.030     Reference: September 21st, 2020
Gene Product: September 1st, 2003
Gene Model: February 7th, 2019
66 days agogrp7 glycine-rich protein7:
 
GRMZM2G082931
    Gene Product: September 18th, 2020
Gene Model: September 19th, 2020
67 days agogrp2 glycine-rich protein2:
10.03
GRMZM2G009448
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: September 18th, 2020
Variation: June 5th, 2014
Gene Model: May 27th, 2015
67 days agogrp1 glycine-rich protein1: protein with high glycine content and repetitive glycine stretches; putative cell wall components
1.08
   Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: September 18th, 2020
Variation: June 5th, 2014
67 days agogrp3 glycine-rich protein3: single or low copy number cDNA;
5.03
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 18th, 2020
Variation: September 1st, 2003
67 days agogrp6 glycine-rich protein6: expression restricted to the root apex; Al-induced protein
 
GRMZM2G118759
    Gene Product: September 18th, 2020
Gene Model: January 15th, 2020
67 days agonrt6 nitrate transport6:
 
GRMZM2G141491
    Gene Product: September 1st, 2003
Gene Model: September 18th, 2020
67 days agopis1 phosphatidylinositol synthase1: involved in plant responses to drought stress
 
GRMZM2G110646
Liu, X et al. 2013. Plant Cell Environ 36:1037-1055     Reference: September 18th, 2020
Gene Product: September 18th, 2020
Gene Model: September 18th, 2020
67 days agogrp5 glycine-rich protein5: stigma-specific; may play a role in maintaining silk structure during development
 
GRMZM2G146308
Tao, TY et al. 2006. Plant Cell Rep 25:848-858     Reference: September 18th, 2020
Gene Product: September 18th, 2020
Gene Model: September 18th, 2020
68 days agorps6a ribosomal proteinS6a: mature mRNA stored in embryo axes
7.04
GRMZM2G054136
Sun, XC et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153281     Reference: September 17th, 2020
Gene Product: September 1st, 2003
Variation: July 3rd, 2013
Gene Model: April 15th, 2015
68 days agobas1 beta alanine synthase1: single copy, oat cDNA cdo385
7.03 - 7.04
GRMZM2G077673
Sun, XC et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153281     Reference: September 17th, 2020
Gene Product: September 1st, 2003
Variation: October 18th, 2013
Gene Model: July 27th, 2016
68 days agotor1 target of rapamycin1: similar to Arabidpsis FKBP12-rapamycin complex-associated proteinexpression is highly regulated during germination
6.05
GRMZM2G049342
Sun, XC et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153281     Reference: September 17th, 2020
Gene Product: November 21st, 2017
Gene Model: August 27th, 2018
68 days agomkkk18 MAP kinase kinase kinase18: function inferred from sequence similarity (Kong et al 2013)
 
GRMZM2G305066
Li, CL et al. 2020. Mol Breed 40:92     Reference: September 17th, 2020
Gene Product: July 10th, 2013
Gene Model: July 11th, 2013
68 days agohex9 hexokinase9:
 
GRMZM2G467069
Li, CL et al. 2020. Mol Breed 40:92     Reference: September 17th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
68 days agocdpk21 calcium dependent protein kinase21:
 
GRMZM2G047479
Li, CL et al. 2020. Mol Breed 40:92     Reference: September 17th, 2020
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
68 days agomcsf1 mitochondrial CAF-like splicing factor1: mutants have empty pericarp
 
GRMZM2G087395
Yang, Y-Z et al. 2020. RNA Biol. doi: 10.1080/15476286.2020.1817267     Reference: September 17th, 2020
Gene Product: July 23rd, 2009
Variation: July 1st, 2019
Gene Model: July 1st, 2019
68 days agoemp32 empty pericarp32: mutants have an empty pericarp phenotype
 
GRMZM2G089959
Yang, Y-Z et al. 2020. RNA Biol. doi: 10.1080/15476286.2020.1817267   At5g57250 (TAIR) Reference: September 17th, 2020
Gene Product: December 27th, 2016
Variation: September 17th, 2020
Gene Model: June 12th, 2020
68 days agoppr282 pentatricopeptide repeat protein282: ortholog of Arabidopsis SLO3
 
GRMZM2G177845
Yang, Y-Z et al. 2020. RNA Biol. doi: 10.1080/15476286.2020.1817267   AT3G61360 (TAIR) Reference: September 17th, 2020
Gene Product: December 27th, 2016
Gene Model: September 17th, 2020
68 days agorps6k1 ribosomal protein S6 kinase1: responsible for in vivo ribosomal protein S6 (S6rp) phosphorylation
 
GRMZM2G080001
Sun, XC et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153281     Reference: September 17th, 2020
Gene Product: September 17th, 2020
Gene Model: September 17th, 2020
68 days agorps6b ribosomal proteinS6b:
 
GRMZM5G851698
Sun, XC et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153281     Reference: September 17th, 2020
Gene Product: September 1st, 2003
Gene Model: September 17th, 2020
68 days agotgz21 transglutaminase21:
2.04
GRMZM2G045005
Han, X et al. 2020. J Food Process Preserv doi: 10.1111/jfpp.14756     Reference: September 17th, 2020
Gene Product: December 24th, 2015
Variation: February 2nd, 2010
Gene Model: December 24th, 2015
68 days agomat-r(mtNB) maturase related:
 
GRMZM5G851769
Yang, Y-Z et al. 2020. RNA Biol. doi: 10.1080/15476286.2020.1817267     Reference: September 17th, 2020
Gene Product: September 1st, 2003
Gene Model: June 16th, 2020
69 days agoms5 male sterile5: anthers not exserted; affected at microspore mitosis
5.04 - 5.05
GRMZM2G166330
Huo, Y et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00105     Reference: September 16th, 2020
Gene Product: January 25th, 2019
Variation: September 16th, 2020
Gene Model: September 16th, 2020
69 days agorps8 ribosomal protein S8 homolog: multiple copies; leaf cDNA csu34 similar to ribosomal protein
4.09
GRMZM2G336875
Zhang, JH et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00849     Reference: September 16th, 2020
Gene Product: September 1st, 2003
Variation: April 17th, 2015
Gene Model: April 15th, 2015
69 days agoatp4 ATP synthase4: Chloroplast PPR-SMR protein. Activates atpB translation. Binds atpB 5'UTR. (A. Barkan, 2015)required for normal accumulation of the chloroplast ATP synthase
 
GRMZM2G128665
Zhang, JH et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00849     Reference: September 16th, 2020
Gene Product: December 30th, 2015
Variation: June 15th, 2013
Gene Model: June 15th, 2013
69 days agopgr3 proton gradient regulation3 homolog: Ortholog of Arabidopsis PGR3. Chloroplast PPR protein that stabilizes 5'-end of petL RNA and is required for accumulation of the thylakoid NDH complex. Global protein deficiencies imply additional functions in maize. (A. Barkan, 2015)Ortholog of Arabidopsis PGR3, a PPR protein that stabilizes 5'-end of cp petL RNA and is required for NDH accumulation. Additional functions in maize, with more global effect on accumulation of cp complexes.
 
GRMZM2G372632
Zhang, JH et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00849   AT4G31850 (TAIR)
LOC_Os10g28600 (MSU/TIGR)
Reference: September 16th, 2020
Gene Product: December 27th, 2016
Variation: December 30th, 2015
Gene Model: February 17th, 2015
69 days agorpp13lk3 recognition of Peronospora parasitica 13 like protein 3: encodes an adenylyl cyclase that is located in the mitochondrion; catalyse ATP for producing cAMP and may be involved in ABA-regulated heat resistance
 
GRMZM2G030024
Yang, H et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa431     Reference: September 16th, 2020
Gene Product: September 16th, 2020
Gene Model: September 16th, 2020
70 days agoafd1 absence of first division1: male and female sterility; early meiosis
6.07
GRMZM2G059037
Nan, G et al. 2011. BMC Plant Biology 11:120   AT5G05490 (TAIR)
LOC_Os05g50410 (MSU/TIGR)
Os05g0580500 (Gramene)
Reference: September 15th, 2020
Gene Product: July 30th, 2009
Variation: August 11th, 2011
Gene Model: July 14th, 2011
70 days agoam1 ameiotic1: male and female sterility - anaphase I equatorial; alleles am1-pra1(was pra1), am1-2 (was am2)affects switch to meiotic cell cycle
5.02
   Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Variation: August 11th, 2011
70 days agomus1 MutS homolog1: cDNA similar to E. coli mutS
7.04
GRMZM2G056075
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: August 15th, 2005
Variation: January 28th, 2013
Gene Model: August 5th, 2015
70 days agozyp1 synaptonemal complex protein ZIPPER1: Homlogous to Yeast ZIPPER1 (ZIP1), Arabidopsis ZYP1 and rice ZEP1.
 
GRMZM2G143590
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: March 2nd, 2011
Variation: March 2nd, 2011
Gene Model: June 19th, 2014
70 days agopolm2 polymerase II transcription-mediator2: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II
9.08
GRMZM5G828278
Nunez-Rios, T et al. 2020. Int J Dev Biol pp.doi: 10.1387/ijdb.200098sg     Reference: September 15th, 2020
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
70 days agopolm3 polymerase II transcription-mediator3: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II
9.03
GRMZM2G053588
Nunez-Rios, T et al. 2020. Int J Dev Biol pp.doi: 10.1387/ijdb.200098sg     Reference: September 15th, 2020
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
70 days agoago18b argonaute18b: mutant affects length of central tassel branch
1.08
GRMZM2G457370
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: August 12th, 2016
Variation: August 17th, 2019
Gene Model: August 12th, 2016
70 days agophs1 poor homologous synapsis1: affects homology search
9.00
GRMZM2G100103
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: September 5th, 2006
Variation: August 7th, 2012
Gene Model: August 7th, 2012
70 days agospo1 topoisomerase-like enzyme1: Homolog of SPO11, which generates double-stranded breaks along meiotic chromosomes
 
GRMZM2G129913
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: June 19th, 2014
Variation: April 21st, 2020
Gene Model: June 19th, 2014
70 days agopolm1 polymerase II transcription-mediator1: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II
 
GRMZM2G114459
Nunez-Rios, T et al. 2020. Int J Dev Biol pp.doi: 10.1387/ijdb.200098sg     Reference: September 15th, 2020
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
70 days agodmc1 disrupted meiotic cDNA homolog1:
 
GRMZM2G109618
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Variation: May 12th, 2017
Gene Model: January 27th, 2017
70 days agorad51b recombination protein51 gene b: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
3.05
GRMZM2G084762
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: August 12th, 2016
Variation: May 13th, 2012
Gene Model: June 19th, 2014
70 days agorad51a recombination protein51 gene a: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
7.04
GRMZM2G121543
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: August 12th, 2016
Variation: April 19th, 2012
Gene Model: June 19th, 2014
70 days agocyc12 cyclin12: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II
7.03
GRMZM2G408242
Nunez-Rios, T et al. 2020. Int J Dev Biol pp.doi: 10.1387/ijdb.200098sg     Reference: September 15th, 2020
Gene Product: June 26th, 2009
Variation: December 29th, 2016
Gene Model: December 29th, 2016
71 days agomyb42 myb transcription factor 42: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26   LOC_Os08g43550 (MSU/TIGR) Reference: September 14th, 2020
Gene Product: February 16th, 2011
Variation: November 7th, 2017
71 days agob1 colored plant1: dominant B1 plants have anthocyanin in major plant tissues; some alleles affect aleurone and embryo color; regulates flavonoid enzymes; SSR umc1776
2.03
GRMZM2G172795
Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: October 13th, 2010
Variation: February 14th, 2013
Gene Model: September 22nd, 2011
71 days agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: July 4th, 2018
Variation: July 13th, 2020
71 days agohm1 Helminthosporium carbonum susceptibility1: disease lesions vs. yellowish flecks (Hm1, resistant) on leaves with Cochliobolus carbonum race 1
1.06
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: May 23rd, 2014
Variation: September 1st, 2003
71 days agolc1 red leaf color1: dominant Lc1 confers anthocyanin in coleoptile, nodes, auricle, leaf blade, etc. (compare Sn1 and Hopi1); displaced r1 gene
10.06
GRMZM5G822829
Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 23rd, 2018
71 days agohsp27 heat shock protein27:
 
GRMZM2G335242
Kim, J-T et al. 2020. Appl Biochem 63:54     Reference: September 14th, 2020
Gene Product: January 15th, 2019
Gene Model: September 14th, 2020
71 days agohsp28 heat shock protein28:
 
GRMZM2G098167
Kim, J-T et al. 2020. Appl Biochem 63:54     Reference: September 14th, 2020
Gene Product: January 15th, 2019
Gene Model: September 14th, 2020
71 days agoIDP158  :
3.09
GRMZM2G175076
Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Variation: March 31st, 2005
Gene Model: February 25th, 2019
73 days agomst1 modifier of R1-st1: dominant Mst1 reduces mutability of R1-st
10.06
   Gavazzi, G et al. 1990. Genetics 125:193-199     Reference: September 1st, 2003
Variation: September 12th, 2020
74 days agoserk2 somatic embryogenesis receptor-like kinase2: a single copy DNA with homology to carrot and Arabidopsis SERK genes;SSR umc2304
5.05
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z   AT1G71830 (TAIR)
LOC_Os04g38480 (MSU/TIGR)
Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: June 11th, 2015
Recommended by Ed Coe:
January 8th, 2008
74 days agogst2 glutathione S-transferase2: safener-induced; heterodimer; 2 map sites have been reported on chr 8 and 10
10.03
GRMZM2G132093
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: July 7th, 2010
Gene Model: October 29th, 2015
74 days agortcs1 rootless concerning crown and seminal roots1: root system reduced solely to a primary root yet plants can be carried to seed; cyclin cDNAs absent; naphthalene acetic acid induces adventitious roots
1.02
GRMZM2G092542
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: October 5th, 2009
Variation: October 5th, 2009
Gene Model: July 23rd, 2013
74 days agonec2 necrotic2: green seedling develops necrotic lesions at 2-3 leaf stage; lethal; accumulates divinyl chlorophyllides a an b and may be the dvr1 gene.
1.04
   Govindjee et al. 2020. Plant Physiology Reports doi: 10.1007/s40502-020-00534-4     Reference: September 11th, 2020
Variation: September 11th, 2020
74 days agohscf1 heat shock complementing factor1: cDNA with 2 APETALA2-like binding domains
9.03
GRMZM2G139082
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Variation: December 22nd, 2012
Gene Model: July 28th, 2016
74 days agogst5 glutathione transferase5: cDNA, safener-induced; high activity with fluorodifen herbicide
1.11
GRMZM2G308687
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
74 days agogst6 glutathione transferase6: cDNA, functionally expressed in E. coli
7.01
GRMZM2G129357
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
74 days agogst7 glutathione transferase7: cDNA, functionally expressed in E. coli
3.05
GRMZM2G028556
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 9th, 2010
Gene Model: July 27th, 2016
74 days agochn2 chitinase2: acidic chitinase I, based on cDNA sequence similarity; Southern blots suggest multiple copies
6.01
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
74 days agoabi3 ABI3-VP1-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Grimault et al named this locus ZmAFL4 by homology to Arabidopsis, 2015
 
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: July 29th, 2015
74 days agowox5a WUSCHEL-homeobox-transcription factor 5A: embryonic WUSCHEL homeobox transcription factor (Nardmann et al 2007)
 
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: August 25th, 2017
74 days agowox5b WUSCHEL-homeobox-transcription factor 5b: embryonic transcription factor (Nardmann et al 2007)
 
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: August 25th, 2017
74 days agoserk1 somatic embryogenesis receptor-like kinase1: single copy cDNA with 79% sequence identity with serk2, and significant sequence homology to carrot and Arabidopsis SERK genes;
10.04 - 10.05
GRMZM5G870959
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: January 25th, 2015
Gene Model: January 25th, 2015
74 days agoserk3 somatic embryogenesis receptor-like kinase3: a single copy cDNA;
4.05
GRMZM2G150024
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: July 31st, 2013
Gene Model: June 11th, 2015
74 days agogst8 glutathione transferase8:
 
GRMZM2G156877
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
74 days agogst11 glutathione transferase11:
1.01
GRMZM2G119499
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
74 days agogst18 glutathione transferase18:
3.05
GRMZM2G019090
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 17th, 2010
Gene Model: October 22nd, 2014
74 days agogst19 glutathione transferase19:
6.04
GRMZM2G335618
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 18th, 2010
Gene Model: July 27th, 2016
74 days agogst21 glutathione transferase21:
3.05
GRMZM2G428168
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 18th, 2010
Gene Model: April 18th, 2017
74 days agogst22 glutathione transferase22:
10.04
GRMZM2G330635
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 18th, 2010
Gene Model: April 18th, 2017
74 days agogst29 glutathione transferase29:
3.05
GRMZM2G127789
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
74 days agogst30 glutathione transferase30:
1.04
GRMZM2G044383
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 21st, 2010
Gene Model: July 27th, 2016
74 days agogst31 glutathione transferase31: glutathione S-transferase subunit 31; matches PCO132874 (in silico from AF244696) placed by overgo on chromosome 1
1.01
GRMZM2G475059
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 21st, 2010
Gene Model: April 27th, 2016
74 days agogst32 glutathione transferase32:
1.04
GRMZM2G041685
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
74 days agogst37 glutathione transferase37:
7.04
GRMZM2G178079
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
74 days agogst42 glutathione transferase42:
1.04
GRMZM2G025190
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
74 days agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: April 15th, 2008
74 days agochn3 chitinase3: acidic chitinase I by cDNA sequence similarity; Southern blots suggest single or low copy number
5.03
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
74 days agolec1 LEC1 transcription factor1:
5.06
GRMZM2G011789
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: August 9th, 2016
Gene Model: April 8th, 2011
74 days agozag6 agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis.
 
GRMZM2G026223
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Variation: June 9th, 2014
Gene Model: June 9th, 2014
74 days agoatl1 auxin transporter-like1: mutant tassels have reduced branch numbers; bald tip on ears with fewer spikelets per row, and agravitropic root growth
 
GRMZM2G127949
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z   AT2G38120 (TAIR)
LOC_Os01g63770 (MSU/TIGR)
Reference: September 11th, 2020
Gene Product: April 19th, 2017
Variation: April 19th, 2017
Gene Model: March 12th, 2015
74 days agogst46 glutathione transferase46:
 
GRMZM2G480439
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: September 11th, 2020
74 days agogst47 glutathione transferase47:
 
GRMZM2G161827
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: September 11th, 2020
74 days agogst48 glutathione transferase48:
 
GRMZM2G056388
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: September 11th, 2020
74 days agoglp2 germin-like protein2:
 
GRMZM2G045809
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: December 24th, 2015
Gene Model: September 11th, 2020
74 days agoyuc5 Yucca5: transcribed in the root apex (0-5mm)
7.02
GRMZM2G132489
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
75 days agopro1 proline responding1: (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
8.04
GRMZM2G375504
Altuntas, C; Terzi, R. 2020. Phyton Int J Exp Bot 89:487-495     Reference: September 10th, 2020
Gene Product: March 19th, 2015
Variation: September 18th, 2018
Gene Model: June 22nd, 2014
75 days agoao1 aldehyde oxidase1: functionally cloned (Sekimoto et al 1997)
1.11
GRMZM2G141535
Altuntas, C; Terzi, R. 2020. Phyton Int J Exp Bot 89:487-495     Reference: September 10th, 2020
Gene Product: May 2nd, 2012
Variation: May 30th, 2012
Gene Model: October 4th, 2014
76 days agoscro1 scarecrow1: mRNA expressed in endodermis and quiescent center of root, influencing radial pattern
4.08
GRMZM2G131516
Hughes, TE; Langdale, JA. 2020. Plant Direct. doi: 10.1002/pld3.264     Reference: September 9th, 2020
Gene Product: June 24th, 2019
Variation: June 24th, 2019
Gene Model: November 11th, 2012
Recommended by Ed Coe:
January 25th, 2007
76 days agoms45 male sterile45: abnormal microspore wall formation, tassel specific, cDNA clone
9.06
   Cigan, AM et al. 2005. Plant J 43:929-940     Reference: September 9th, 2020
Gene Product: June 27th, 2014
Variation: June 27th, 2014
76 days agogras37 GRAS-transcription factor 37: In double mutants with scro1, most leaf veins are separated by one rather than two mesophyll cells Hughes et al., 2019)
 
   Hughes, TE; Langdale, JA. 2020. Plant Direct. doi: 10.1002/pld3.264     Reference: September 9th, 2020
Gene Product: June 24th, 2019
Variation: June 24th, 2019
76 days agosmk7 small kernel7: mutants have small kernels, but normal composition of storage proteins
 
   Zhao, HL et al. 2020. Plant Physiol 184:359-373     Reference: September 9th, 2020
Gene Product: June 26th, 2020
Variation: June 26th, 2020
76 days agowrky126 WRKY-transcription factor 126: candidate gene for stem architecture
 
GRMZM5G851490
Shang, QQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01062-3     Reference: September 9th, 2020
Gene Product: July 24th, 2017
Gene Model: September 9th, 2020
76 days agochls1 chalcone synthase1: Gene regulated by anther-specific promoter 5126
 
GRMZM2G108894
Cigan, AM et al. 2005. Plant J 43:929-940     Reference: September 9th, 2020
Gene Product: September 1st, 2003
Gene Model: September 9th, 2020
76 days agodfr1 dihydroflavonoid reductase1: male sterile; identification to potential function based on GenBank and TIGR annotations
7.03 - 7.02
GRMZM2G004683
Cigan, AM et al. 2005. Plant J 43:929-940     Reference: September 9th, 2020
Gene Product: November 21st, 2012
Variation: November 21st, 2012
Gene Model: November 21st, 2012
77 days agovpp5 vacuolar-type H+-pyrophosphatase5: variants affect drought tolerance
 
GRMZM2G170927
Jia, T-J et al. 2020. J Int Agr 19:2177-2187   AT1G15690 (TAIR)
LOC_Os02g09150 (MSU/TIGR)
Reference: September 8th, 2020
Gene Product: August 16th, 2016
Variation: August 16th, 2016
Gene Model: August 16th, 2016
77 days agolysm1 lysin motif domain protein1: ortholog of OsAM3 (rice arbuscular mycorrhizal3)
 
GRMZM2G135244
Nadal, M et al. 2017. Nature Plants 3:17073   LOC_Os01g57400 (MSU/TIGR) Reference: September 7th, 2020
Gene Product: September 8th, 2020
Gene Model: September 7th, 2020
78 days agorth3 roothair defective3: like rth1, but "stocking cap" roothair initials under electron microscope
1.03
   Ma, XM et al. 2020. Ann Bot pp.doi: 10.1093/aob/mcaa159     Reference: September 7th, 2020
Variation: June 30th, 2012
78 days agopht6 phosphate transporter protein6:
 
GRMZM5G881088
Ma, XM et al. 2020. Ann Bot pp.doi: 10.1093/aob/mcaa159     Reference: September 7th, 2020
Gene Product: June 16th, 2016
Variation: June 17th, 2020
Gene Model: May 27th, 2015
78 days agopht8 phosphate transporter protein8:
 
GRMZM2G009779
Ma, XM et al. 2020. Ann Bot pp.doi: 10.1093/aob/mcaa159     Reference: September 7th, 2020
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
81 days agopzb01301  :
10.02
   LI, HW et al. 2020. Plant Physiol Biochem 155:756-768     Reference: September 4th, 2020
Variation: December 31st, 2017
81 days agolhcb3 light harvesting chlorophyll a/b binding protein3: probed by clone provided by L. Bogorad (aka cab4)
8.03
   LI, HW et al. 2020. Plant Physiol Biochem 155:756-768     Reference: September 4th, 2020
Gene Product: January 8th, 2005
Variation: August 20th, 2014
81 days agolhcb7 light harvesting complex mesophyll7: cDNA sequence distinct from other light harvesting chlorophyll polypeptides; two copies by Southern blot analysis (aka cab-m7)
6.07
   LI, HW et al. 2020. Plant Physiol Biochem 155:756-768     Reference: September 4th, 2020
Gene Product: January 8th, 2005
Variation: January 5th, 2013
81 days agoltpg1 glycosylphosphatidylinositol-anchored lipid protein transfer1: NCBI: putative bifunctional inhibitor/LTP/seed storage protein family
1.06
GRMZM2G083725
LI, HW et al. 2020. Plant Physiol Biochem 155:756-768     Reference: September 4th, 2020
Gene Product: September 1st, 2003
Variation: December 2nd, 2016
Gene Model: December 2nd, 2016
82 days agoal9 aleurone9: aleurone specific cDNA, unknown function
8.08
GRMZM2G091006
Linnestad, C et al. 2003. US Pat Off pp.US 2003/0097.689 A1     Reference: September 3rd, 2020
Variation: October 14th, 2009
Gene Model: January 14th, 2016
82 days agokn1 knotted1: dominant Kn1 plants have localized proliferation of tissue at vascular bundles on leaf
1.10
   Crisp, PA et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2010250117     Reference: September 3rd, 2020
Variation: December 6th, 2013
82 days agomc1 mucronate1: dominant Mc1 kernels have opaque endospermendosperm-specific protein cDNA
2.06
GRMZM2G060429
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 17th, 2010
Variation: September 16th, 2010
Gene Model: August 4th, 2018
82 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2016
82 days agodzs10 delta zein structural10: [was Zps10/(22)]; high (22.5%) methionine 10kDa delta zein; RFLP (probe 10kZ-1)
9.03 - 9.03
   Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: November 21st, 2012
82 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, N et al. 2020. Frontiers Plant Sci 11:1298     Reference: September 3rd, 2020
Gene Product: August 25th, 2017
82 days agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Crisp, PA et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2010250117     Reference: September 3rd, 2020
Gene Product: August 21st, 2018
Variation: July 7th, 2017
82 days agozmm16 Zea mays MADS16: single copy; orthologous to rice GLO-like gene, OSMADS2; strongly expressed in developing male and female inflorescences but wealky expressed indeveloping kernels.
3.06
   Qi, S et al. 2020. Gene pp.doi: 10.1016/j.gene.2020.145064   AT5G20240 (TAIR) Reference: September 3rd, 2020
Gene Product: April 1st, 2011
Variation: November 2nd, 2015
82 days agozmm18 Zea mays MADS18: single copy gene that co-segregates and shares 97% sequence identity with zmm29; probably an ortholog of rice GLOBOSA-like gene, OSMADS4; expressed in male and female inflorescences and developing kernels.
8.03
GRMZM5G805387
Qi, S et al. 2020. Gene pp.doi: 10.1016/j.gene.2020.145064     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: August 27th, 2013
Gene Model: July 2nd, 2014
82 days agozmm29 Zea mays MADS29: single copy gene that co-segregates and shares 97% nt sequence identity with zmm18; probably an ortholog of rice GLOBOSA-like gene, OSMADS4; strongly expressed in male and female inflorescences and developing kernels.
8.03
GRMZM2G152862
Qi, S et al. 2020. Gene pp.doi: 10.1016/j.gene.2020.145064     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: August 27th, 2013
Gene Model: July 2nd, 2014
82 days agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
   Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 17th, 2010
Variation: December 10th, 2019
82 days agoole1 oleosin1: major protein from lipid bodies, cDNA and genomic clones; SSR umc1185
2.03
   Wang, N et al. 2020. Frontiers Plant Sci 11:1298     Reference: September 3rd, 2020
Gene Product: July 23rd, 2018
Variation: February 20th, 2015
82 days agode30 defective endosperm B30: dominant De*-B30 has opaque, high lysine endosperm
7.01 - 7.02
AF546188.1_FG007
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 15th, 2014
Gene Model: September 14th, 2014
82 days agoimp1 importin1: leaf cDNA csu244 similar to importin
8.03
   Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: July 7th, 2017
82 days agogz50 50kD gamma zein: endosperm-specific protein cDNA
7.02
GRMZM2G138689
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 22nd, 2010
Variation: September 16th, 2010
Gene Model: November 21st, 2014
82 days agoaz22z3 22kD alpha zein3: mRNA for 22kD zein; in z1c(zp22) cluster
4.01
GRMZM2G044625
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: May 31st, 2010
Gene Model: November 21st, 2014
82 days agosweet15b sugars will eventually be exported transporter15b: similar to senescence-associated protein 29 of A. thaliana
 
GRMZM5G872392
Qi, S et al. 2020. Gene pp.doi: 10.1016/j.gene.2020.145064     Reference: September 3rd, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
82 days agozp2 zein protein2: encodes a 19 kD alpha zein
 
AF546188.1_FG005
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Gene Model: August 1st, 2016
82 days agohsp9 heat shock protein9:
 
GRMZM2G046382
Wang, N et al. 2020. Frontiers Plant Sci 11:1298     Reference: September 3rd, 2020
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
82 days agorfwd3 ring finger and WD40 repeat3: mutants decrease zein transcription and seed nutrient reserves
 
GRMZM2G085691
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: March 26th, 2020
Variation: July 23rd, 2020
Gene Model: July 23rd, 2020
82 days agoltp2 lipid transfer protein2:
9.03
GRMZM2G040689
Wang, N et al. 2020. Frontiers Plant Sci 11:1298   AT2G10940 (TAIR) Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Gene Model: June 20th, 2020
83 days agocdpk11 calcium dependent protein kinase11: encodes a protein that functions in abscisic acid signaling upstream of the MAP kinase encoded by mpk2, aka MPK5 (Ding et al 2012)
 
GRMZM2G047486
Abraham-Juarez, M-J et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00300     Reference: September 2nd, 2020
Gene Product: July 9th, 2013
Variation: April 3rd, 2015
Gene Model: July 9th, 2013
84 days agoae1 amylose extender1: glassy, tarnished endosperm; high amylose content; application: highly linear starch is used for food films, fibers, and other industrial purposes
5.04
   Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: June 6th, 2011
Variation: March 20th, 2020
84 days agodu1 dull endosperm1: glassy, tarnished endosperm; encodes a starch synthase III, that with an isoamylase-type debranching enzyme represses accumulation of phytoglycogen
10.03
GRMZM2G141399
Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: October 14th, 2016
Variation: June 29th, 2015
Gene Model: February 28th, 2012
84 days agofl1 floury endosperm1: (was o4) endosperm opaque, soft; dosage effect with fl1-ref allele, but o4 allele is recessive
2.04
GRMZM2G094532
Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: July 8th, 2013
Variation: September 16th, 2010
Gene Model: July 8th, 2013
84 days agofl2 floury2: endosperm opaque, soft; dosage effect; encodes an abnormal 24kDa alpha-zein, blocked in removal of its signal peptide, preventing transfer to lumen of the endoplasmic reticulummRNA for 22kD zein; in z1c(zp22) cluster
4.03
GRMZM2G397687
Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: September 1st, 2003
Variation: October 17th, 2014
Gene Model: December 19th, 2011
84 days agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
   Lu, YX et al. 2020. Plant Reproduction pp.doi: 10.1007/s00497-020-00394-w     Reference: September 1st, 2020
Variation: June 22nd, 2005
84 days agoga2 gametophyte factor2: Ga2 pollen grains are competitively superior to ga2 on Ga2 silks.
5.04
   Lu, YX et al. 2020. Plant Reproduction pp.doi: 10.1007/s00497-020-00394-w     Reference: September 1st, 2020
Variation: September 29th, 2016
84 days agoh1 soft starch1: endosperm opaque, starchy (like floury), recessive to horny
3.04
   Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Variation: September 1st, 2003
84 days agow3 white seedling3: like vp2; w3-8686 pale endosperm, pale green seedling in dim light
2.08 - 2.07
GRMZM2G113476
Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880   AT3G11945 (TAIR) Reference: September 1st, 2020
Gene Product: January 8th, 2018
Variation: January 8th, 2018
Gene Model: January 8th, 2018
84 days agoy9 pale yellow9: pale endosperm, slightly viviparous; green to pale green seedlings and plants; accumulates 9,15,9'-tri-cis-zeta carotene in dark
10.03 - 10.03
GRMZM2G011746
Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: December 10th, 2011
Variation: September 28th, 2011
Gene Model: September 22nd, 2011
84 days agotcb1 teosinte crossing barrier1: Barrier to crossing of maize onto Central Plateau teosinte - transferred to maize with linked positive modifiers, fails to accept any pollen, including Ga1-s
4.04
   Lu, YX et al. 2020. Plant Reproduction pp.doi: 10.1007/s00497-020-00394-w     Reference: September 1st, 2020
Gene Product: September 10th, 2018
Variation: May 24th, 2019
84 days agonrt5 nitrate transport5:
 
GRMZM2G455124
Liu, RR et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1815980     Reference: September 1st, 2020
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
85 days agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
   Kolkman, JM, et al. 2020. G3. 0:doi: 10.1534/g3.120.401500     Reference: August 31st, 2020
Gene Product: December 18th, 2014
Variation: August 17th, 2020
85 days agoftr1 ferredoxin-thioredoxin1: cDNA sequence
9.01
GRMZM2G122793
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Variation: September 2nd, 2015
Gene Model: September 2nd, 2015
85 days agomatl1 matrilineal1: encodes a pollen-specific phospholipase; novel edits lead to a 6.7% haploid induction rate
 
GRMZM2G471240
Gustin, JL et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12857     Reference: August 31st, 2020
Gene Product: June 12th, 2020
Variation: February 10th, 2017
Gene Model: January 25th, 2017
85 days agotrx1 thioredoxin1: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM2G166877
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
85 days agotrx2 thioredoxin2: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM2G082886
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
85 days agotrx3 thioredoxin3: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM2G170008
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
85 days agotrx4 thioredoxin4: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM5G892522
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
85 days agotrx5 thioredoxin5: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM2G086779
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
85 days agotrxr1 thioredoxin reductase1: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM5G841142
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
85 days agotrxr2 thioredoxin reductase2:
 
GRMZM5G889769
    Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
85 days agocda3 cytidine deaminase3:
 
GRMZM2G008297
Xu, JH; Messing, J. 2006. BMC Genetics. 7:52     Reference: August 26th, 2008
Gene Product: August 26th, 2008
Gene Model: August 31st, 2020
3 months agozpu1 pullulanase-type starch debranching enzyme1: single copy, cDNA clone similar to rice sequence; SSR umc1003The zpu1 gene encodes a pullulanase-type starch debranching enzyme. Analysis of plants homozygous for the zpu1-204 mutation reveal the genes role in starch catabolism. zpu1-204 endosperm accumulate maltooligosaccharides not found in wild type plants. zpu1-204 are also deficient for linear maltooligosaccharides.
2.05
GRMZM2G158043
Zhong, YY et al. 2020. Carbohydrate Polymers 247:116681     Reference: August 24th, 2020
Gene Product: October 25th, 2011
Variation: June 29th, 2015
Gene Model: November 20th, 2014
3 months agogbss1 granule-bound starch synthase1:
 
GRMZM2G008263
Zhong, YY et al. 2020. Carbohydrate Polymers 247:116681     Reference: August 24th, 2020
Gene Product: June 4th, 2008
Variation: August 4th, 2011
Gene Model: November 20th, 2014
3 months agohcf60 high chlorophyll fluorescence60: green to pale green seedling leaves, deficiency in photosystem I
 
GRMZM2G038013
Zhang, Y et al. 2020. Int J Mol Sci 21:6082     Reference: August 24th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 17th, 2015
3 months agosu4 sugary4: duplicate factor: in combination with su3 gives sugary endosperm phenotype.
6.05
GRMZM2G090905
Zhong, YY et al. 2020. Carbohydrate Polymers 247:116681     Reference: August 24th, 2020
Gene Product: October 25th, 2011
Variation: June 3rd, 2011
Gene Model: October 24th, 2011
3 months agoss1 starch synthase I: single copy endosperm specific cDNA; encoded-protein cross-reacts with antibody to granule associated starch synthase I
9.02
   Zhong, YY et al. 2020. Carbohydrate Polymers 247:116681     Reference: August 24th, 2020
Gene Product: October 14th, 2016
Variation: October 7th, 2010
3 months agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
   Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 4th, 2013
3 months agorpl19 ribosomal protein L19: single copy cDNA
5.06
GRMZM2G171444
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 28th, 2016
3 months agopgm2 phosphoglucomutase2: electrophoretic mobility; null allele is known; cytosolic; monomeric
5.01
GRMZM2G109383
Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 28th, 2011
3 months agotua4 alpha tubulin4: belongs to alpha tubulin subfamily I, with tua1 and tua2; gene specific cDNA probe
5.01
   Bertels, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa385     Reference: August 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agogst24 glutathione transferase24:
5.07
GRMZM2G032856
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: September 1st, 2003
Variation: August 20th, 2010
Gene Model: July 27th, 2016
3 months agouce4 ubiquitin conjugating enzyme4:
2.01
   Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: December 19th, 2019
Variation: July 29th, 2004
3 months agoopr2 12-oxo-phytodienoic acid reductase2: Cytoplasmic
8.05
GRMZM2G000236
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: September 3rd, 2010
Variation: December 11th, 2013
Gene Model: November 27th, 2013
3 months agoaox3 alternative oxidase3:
 
GRMZM2G074743
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: February 22nd, 2012
Gene Model: February 17th, 2012
3 months agoga2ox3 gibberellin 2-oxidase3:
 
GRMZM2G022679
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
3 months agomcm4 minichromosome maintenance4:
 
GRMZM2G066101
Bertels, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa385     Reference: August 22nd, 2020
Gene Product: August 2nd, 2017
Gene Model: July 31st, 2017
3 months agouce9 ubiquitin conjugating enzyme9:
 
GRMZM2G027378
Bertels, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa385     Reference: August 22nd, 2020
Gene Product: December 19th, 2019
Gene Model: May 10th, 2018
3 months agocul2 cullin2:
 
GRMZM2G166694
Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: May 10th, 2018
Gene Model: May 10th, 2018
3 months agolug9 leunig-related9:
 
GRMZM2G425377
Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: October 23rd, 2018
Gene Model: July 3rd, 2020
3 months agoIDP610  :
2.09
GRMZM2G152258
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Variation: March 31st, 2005
Gene Model: February 20th, 2019
3 months agodek605 defective kernel605: mutants have delayed seed and seedling development
5.05
GRMZM2G114241
Fan, KJ et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa110     Reference: August 21st, 2020
Gene Product: December 27th, 2016
Variation: August 21st, 2020
Gene Model: July 10th, 2018
3 months agotrkin1 tandem repeat kinesin1: required to mobilize neocentromeres
 
   Swentowsky, KW et al. 2020. Genes Dev pp.doi: 10.1101/gad.340679.120     Reference: August 21st, 2020
Gene Product: November 10th, 2017
3 months agokindr1 kinesin driver1: on Ab10; encodes a kinesin-14 required to mobilize neo-centromeres; made up of the major tandem repeat knob180.
 
   Swentowsky, KW et al. 2020. Genes Dev pp.doi: 10.1101/gad.340679.120     Reference: August 21st, 2020
Gene Product: November 10th, 2017
3 months agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
3 months agoan1 anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+
1.08
GRMZM2G081554
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Variation: May 13th, 2020
Gene Model: November 7th, 2011
3 months agohcf3 high chlorophyll fluorescence3: (aka hcf9, hcf107) missing PSII thylakoid membrane core complex; green seedling; RNA metabolism
1.03
GRMZM2G121960
Chotewutmontri, P; Barkan, A. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2007833117     Reference: August 19th, 2020
Gene Product: December 1st, 2015
Variation: August 19th, 2020
Gene Model: December 1st, 2015
3 months agopsa3 photosystemI3: Mutants have a pale green seedling phenotype; lacks photosystem I core complex polypeptides
 
GRMZM2G051403
Chotewutmontri, P; Barkan, A. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2007833117   AT3G55250 (TAIR) Reference: August 19th, 2020
Gene Product: May 20th, 2017
Variation: May 20th, 2017
Gene Model: May 20th, 2017
3 months agopet2 photosynthetic electron transport2: lacks cytochrome bf polypeptidesOrtholog of Arabidopsis HCF208 and Chlamydomonas CCB2. Cyt b6 heme attachment factor. (A. Barkan, 2015)
 
GRMZM2G087063
Chotewutmontri, P; Barkan, A. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2007833117   At5g52110 (TAIR)
LOC_Os10g37840 (MSU/TIGR)
Os10g0522500 (Gramene)
Reference: August 19th, 2020
Gene Product: April 19th, 2011
Variation: August 19th, 2020
Gene Model: April 19th, 2011
3 months agocrp1 chloroplast RNA processing1: Chloroplast PPR protein. Activates translation of petA and psaC genes. Stabilizes petB-petD intergenic RNA termini. Binds petA, psaC, petD 5'UTRs. (A. Barkan, 2015)pale green seedling lethal, high chlorophyll leaf fluorescence;cytochromeb6/f and PSI deficient; protein translation
7.03 - 7.06
   Chotewutmontri, P; Barkan, A. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2007833117   AT5G42310 (TAIR)
LOC_Os07g36390 (MSU/TIGR)
Os07g0548300 (Gramene)
Reference: August 19th, 2020
Gene Product: December 27th, 2016
Variation: July 23rd, 2009
3 months agonta1 N-terminal amidase1: NCBI: CemA-like proton extrusion protein-related
9.08
GRMZM2G110258
Chotewutmontri, P; Barkan, A. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2007833117   At4g34090 (TAIR)
LOC_Os03g01920 (MSU/TIGR)
Reference: August 19th, 2020
Variation: August 18th, 2020
Gene Model: April 21st, 2017
3 months agotps1 terpene synthase1: possible plant defense gene
2.02
GRMZM2G049538
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: May 28th, 2012
Variation: August 6th, 2013
Gene Model: May 28th, 2012
3 months agocpps3 copalyl diphosphate synthase3: Functions as a (+)-CPP synthase
 
GRMZM2G068808
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
3 months agoks1 kaurene synthase1:
 
GRMZM2G016922
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
3 months agoks2 kaurene synthase2:
 
GRMZM2G093526
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
3 months agoks4 kaurene synthase4:
 
AC214360.3_FG001
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
3 months agoks6 kaurene synthase6:
 
GRMZM2G391312
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: December 2nd, 2015
3 months agocpps4 copalyl diphosphate synthase4: Produces 8,13-CPP and LPP; moderately inducible expression under root exposure to abiotic stress
 
AC218998.2_FG011
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: November 9th, 2018
3 months agoks3 kaurene synthase3: functionality inferred from expression data and sequence similarity (Song et al 2011; Nelissen et al 2012)
2.02
GRMZM2G093603
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: August 15th, 2012
3 months agosbp9 SBP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.01
   Liu, Y et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00389     Reference: August 18th, 2020
Gene Product: July 5th, 2019
3 months agoadc1 arginine decarboxylase1:
9.03
GRMZM2G396553
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: August 18th, 2020
Variation: September 1st, 2003
Gene Model: March 7th, 2018
3 months agosam2 S-adenosyl methionine decarboxylase2: leaf cDNA, csu6
2.04
   Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: September 1st, 2003
Variation: July 13th, 2013
3 months agopao1 polyamine oxidase1: cDNA and genomic clones, low copy numberplays an important role in tumor development during the maize-U. maydis interaction
10.03
GRMZM2G034152
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: June 10th, 2020
Variation: October 7th, 2015
Gene Model: October 7th, 2015
3 months agoadc2 arginine decarboxylase2:
4.06
   Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: August 18th, 2020
Variation: September 25th, 2007
3 months agopao3 polyamine oxidase3:
 
GRMZM2G396856
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: June 10th, 2020
Gene Model: June 9th, 2020
3 months agospms1 spermine synthase1: up-regulated by salt stress
 
GRMZM2G047867
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: June 19th, 2020
Gene Model: June 19th, 2020
3 months agospds3 spermidine synthase3:
 
GRMZM2G120578
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: June 19th, 2020
Gene Model: August 18th, 2020
3 months agosam3 S-adenosylmethionine decarboxylase3:
 
GRMZM2G060369
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: September 1st, 2003
Gene Model: August 18th, 2020
3 months agopao7 polyamine oxidase7:
 
   Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: June 10th, 2020
3 months agoodc1 ornithine decarboxylase 1:
 
GRMZM2G140824
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: March 19th, 2008
Variation: March 19th, 2008
Gene Model: August 18th, 2020
3 months agoadh1 alcohol dehydrogenase1: electrophoretic mobility; null alleles are known; dimeric; intra/interlocus hybrid bands occur); SSR umc1726
1.10
   He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: July 8th, 2009
Variation: March 22nd, 2006
3 months agocpn1 chaperonin 1: cDNA sequence homologous to hsp60 family; 2 copies
5.03
GRMZM2G458208
He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: September 1st, 2003
Variation: May 20th, 2015
Gene Model: May 20th, 2015
3 months agonlp9 NLP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04
GRMZM2G105004
He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: December 3rd, 2019
Variation: July 29th, 2004
Gene Model: October 21st, 2018
3 months agoamt1 ammonium transporter1:
 
GRMZM2G175140
He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
3 months agomha3 membrane H(+)-ATPase3:
 
GRMZM2G104325
He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: September 1st, 2003
Variation: January 22nd, 2016
Gene Model: January 22nd, 2016
3 months agoaatr1 amino acid transporter1: candidate gene for nitrogen use efficiency
 
GRMZM2G108597
He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: August 17th, 2020
Gene Model: August 17th, 2020
3 months agomha2 plasma-membrane H+ATPase2: cDNA sequence similar to plant plasma-membrane [H+]-ATPase and distinct from mha1
2.02
   Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: May 13th, 2009
3 months agomyb75 MYB-transcription factor 75: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
1.04
   Wang, D, et al. 2020. Genetics. 0:doi: 10.1534/genetics.120.303264     Reference: August 7th, 2020
Variation: September 25th, 2007
3 months agomha8 membrane H(+)-ATPase8:
9.02
GRMZM2G455557
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: June 15th, 2020
3 months agomha13 membrane H(+)-ATPase13:
1.09
   Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
3 months agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
GRMZM2G005624
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
3 months agodhn2 dehydrin2: polymorphic protein in embryos of some inbredssimilar to Arabidopsis dehydrin Rab18
9.03
GRMZM2G098750
Castorina, G, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.20.00322     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: October 12th, 2018
3 months agosk1 silkless ears1: pistils abort, no silks
2.03 - 2.04
GRMZM2G021786
Sun, YH, et al. 2020. Genome Biol. 21:143   AT3G22250 (TAIR)
LOC_Os04g44354 (MSU/TIGR)
Reference: August 7th, 2020
Gene Product: September 24th, 2018
Variation: August 21st, 2018
Gene Model: October 31st, 2016
3 months agote1 terminal ear1: stalked ear appendages at tip; varying to infolded ears
3.05
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: July 24th, 2017
3 months agots1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: January 3rd, 2018
Variation: September 5th, 2019
3 months agots2 tassel seed2: like ts1, but tassel branches variably pistillate and staminate; sequence homologous to short chain alcohol dehydrogenases; SSR phi001
1.03
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agotu1 tunicate1: dominant Tu1 ears develop long glumes enclosing individual kernels; tassels develop large, coarse glumes and sex reversal; both inflorescences become grossly vegetative and sterile in homozygotes
4.08 - 4.08
GRMZM2G370777
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: June 12th, 2012
Variation: February 3rd, 2011
Gene Model: May 9th, 2012
3 months agomha4 proton-exporting ATPase4:
10.07
GRMZM2G006894
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: December 14th, 2017
Gene Model: December 14th, 2017
3 months agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
GRMZM2G101511
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: July 5th, 2019
Variation: May 7th, 2015
Gene Model: October 28th, 2011
3 months agotip1 tonoplast intrinsic protein1: tip1 cDNA is 1097 bp long, including the 93 bp leader sequence. Its derived amino acid sequence has 76% identity with the tonoplast aquaporin from Arabidopsis.
10.04
GRMZM2G168439
Devi, MJ; Reddy, VR. 2020. Plant Physiol Biochem 154:714-722     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2015
3 months agopip2g plasma membrane intrinsic protein2:
 
   Devi, MJ; Reddy, VR. 2020. Plant Physiol Biochem 154:714-722     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agomha1 membrane H(+)-ATPase1: cDNA and genomic sequences similar to plant plasma membrane proton-translocating ATPase, major band in Southerns; partly contained in Bs-1 retroelement; SSR umc1207
2.09
GRMZM2G144821
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: February 20th, 2007
Gene Model: January 22nd, 2016
3 months agofdl1 fused leaves1: coleoptile-first or first-second leaves fused at epidermis, curly
7.04
GRMZM2G056407
Castorina, G, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.20.00322     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: February 13th, 2020
Gene Model: September 12th, 2018
3 months agoaos1 allene oxide synthase1: expression induction by herbivory and methyl jasmonate
9.06
GRMZM2G067225
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: October 29th, 2015
3 months agonsa1 Na+ content under saline-alkaline conditions1: involved in Na+ homeostasis; mutants promote root Na+ efflux
 
GRMZM2G000397
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: January 10th, 2020
Variation: January 10th, 2020
Gene Model: January 10th, 2020
3 months agomha5 membrane H(+)-ATPase5:
 
GRMZM2G341058
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
3 months agomha6 membrane H(+)-ATPase6:
 
GRMZM2G008122
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
3 months agomha7 membrane H(+)-ATPase7:
 
GRMZM2G148374
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
3 months agomha10 membrane H(+)-ATPase10:
 
GRMZM2G131309
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
3 months agomha11 membrane H(+)-ATPase11:
 
GRMZM2G172183
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
3 months agomha12 membrane H(+)-ATPase12:
 
GRMZM2G035520
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
3 months agomha9 membrane H(+)-ATPase9:
 
AC209050.3_FG001
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
3 months agoaos5 allene oxide synthesis5:
 
GRMZM2G033098
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: March 19th, 2020
3 months agolw1 lemon white1: white seedling, pale yellow endosperm; some alleles have zebra or luteus phenotypes
1.10
GRMZM2G027059
Mlotshwa, S et al. 2020. Plant Direct. doi: 10.1002/pld3.224     Reference: August 6th, 2020
Gene Product: June 20th, 2012
Variation: March 10th, 2016
Gene Model: January 8th, 2014
3 months agoccha1 chloroplast-localized potential Ca2+/H+ antiporter1: encodes a chloroplast-localized Mn2+ or Ca2+ transporter
 
GRMZM2G464891
Wang, CJ et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.08.002   At1g64150 (TAIR) Reference: August 6th, 2020
Gene Product: August 6th, 2020
Variation: August 6th, 2020
Gene Model: August 6th, 2020
3 months agofat2 fatty acyl-ACP thioesterase2:
9.02
GRMZM5G829544
Li, L, et al. 2011. PLoS One. 6:e24699   AT1G08510 (TAIR) Reference: August 5th, 2020
Gene Product: May 23rd, 2012
Variation: May 23rd, 2012
Gene Model: May 23rd, 2012
Recommended by Lin Li:
May 24th, 2012
3 months agoo10 opaque endosperm10: like o1
 
GRMZM2G346263
Yao, DS, et al. 2016. PLoS Genetics. 12:e1006270     Reference: August 5th, 2020
Gene Product: August 20th, 2016
Variation: August 20th, 2016
Gene Model: August 20th, 2016
3 months agopx3 peroxidase3: electrophoretic mobility, anodal; monomeric; widely distributed in tissues
7.05 - 7.06
GRMZM2G427815
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 18th, 2015
Variation: August 11th, 2015
Gene Model: August 11th, 2015
3 months agotan1 tangled1: (was py1) leaves short, pointed, fine white streaks; displays abnormally oriented cell divisions and altered growth and development throughout the plant
6.05
   Martinez, P, et al. 2020. J Cell Biol. 219:e201907184     Reference: August 5th, 2020
Variation: June 29th, 2005
3 months agoiaa11 Aux/IAA-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G167794
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Variation: September 1st, 2003
Gene Model: April 2nd, 2018
3 months agomlks2 Maize LINC KASH AtSINE-like2: required for normal male meiosis and pollen development and normal stomatal complex development
 
GRMZM2G000608
Gumber, HK, et al. 2019. Nucleus. 10:144-166     Reference: August 5th, 2020
Gene Product: December 7th, 2019
Variation: June 22nd, 2019
Gene Model: June 7th, 2018
3 months agogst25 glutathione transferase25:
9.08
GRMZM2G161905
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
3 months agogst34 glutathione transferase34:
 
GRMZM2G145069
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Gene Model: April 18th, 2017
3 months agohsftf11 HSF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.11
GRMZM2G132971
Li, YS, et al. 2020. 11:881   AT2G26150 (TAIR) Reference: August 5th, 2020
Gene Product: May 15th, 2020
Gene Model: October 13th, 2017
3 months agoemb14 embryo defective 14: mutant has defective embryo; unlinked suppressor(s) give an albino seedling phenotype
 
GRMZM2G384293
Li, C-L; Shen, Y; Meeley, RB; McCarty, DR; Tan, BC. 2015. Plant J. 84:785-799   AT3G47450 (TAIR)
LOC_Os02g01440 (MSU/TIGR)
Reference: August 5th, 2020
Gene Product: July 5th, 2013
Variation: October 13th, 2015
Gene Model: July 1st, 2013
3 months agoga20ox6 gibberellin 20-oxidase6:
 
GRMZM2G127232
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: October 28th, 2014
Gene Model: July 6th, 2020
3 months agoder1 derlin1: endoplasmic reticulum-associated degradation protein
8.04
GRMZM2G117388
Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Variation: June 11th, 2012
Gene Model: December 22nd, 2015
Recommended by Ed Coe:
May 1st, 2007
3 months agopab2 polyA binding protein2:
 
GRMZM2G102829
Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Gene Product: August 4th, 2020
Gene Model: August 4th, 2020
3 months agopdi13 protein disulfide isomerase13:
 
GRMZM2G376542
Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Gene Product: September 1st, 2003
Gene Model: August 4th, 2020
3 months agoconr1 concentric ring1: mutants have a 'concentric ring' leaf lesion phenotype
2.04
GRMZM2G014695
Kim, SB et al. 2020. Plant J pp.doi: 10.1111/tpj.14945     Reference: August 4th, 2020
Variation: August 4th, 2020
Gene Model: March 15th, 2020
3 months agoad1 adherent1: seedling leaves, tassel branches, and occasionally top leaves adhere
1.08
GRMZM2G167438
Liu, X et al. 2020. New Phytol pp.doi: 10.1111/nph.16837     Reference: August 3rd, 2020
Gene Product: November 1st, 2018
Variation: February 13th, 2020
Gene Model: February 13th, 2020
3 months agogi2 gigantea2: homologous to Arabidopsis photoperiod gene gigantea.
3.03
GRMZM5G844173
Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Gene Product: September 19th, 2012
Variation: September 18th, 2012
Gene Model: September 18th, 2012
3 months agolfy1 leafy1: dominant Lfy1 plants have increased number of leaves above ear
 
   Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Variation: September 24th, 2015
3 months agolhcb6 light harvesting chlorophyll a/b binding protein6:
 
GRMZM2G092427
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: January 8th, 2005
Variation: October 8th, 2010
Gene Model: October 9th, 2015
3 months agopsb3 photosystem II3:
4.04
GRMZM2G174984
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Variation: April 14th, 2015
Gene Model: April 14th, 2015
3 months agokcs15 3-ketoacyl-CoA synthase15: NCBI: fatty acid elongase
1.08
GRMZM2G162508
Liu, X et al. 2020. New Phytol pp.doi: 10.1111/nph.16837     Reference: August 3rd, 2020
Gene Product: November 1st, 2018
Variation: November 4th, 2016
Gene Model: November 4th, 2016
3 months agozmm15 Zea mays MADS-box 15:
5.01
GRMZM2G553379
Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Variation: June 15th, 2018
Gene Model: June 15th, 2018
3 months agopsbB (cp)  :
 
GRMZM5G808939
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Gene Model: June 16th, 2020
3 months agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
   Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Gene Product: August 21st, 2018
Variation: June 25th, 2020
3 months agopsa6 photosystem I reaction center6: leaf cDNA csu67, similar to barley photosystem I subunit
7.01
GRMZM2G012397
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 8th, 2015
3 months agoploc1 plastocyanin homolog1: leaf cDNA csu257, similar to plastocyanin
6.01
GRMZM2G071450
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: August 18th, 2018
Gene Model: August 19th, 2018
3 months agooec17 oxygen evolving complex, 17kDa homolog: leaf cDNA csu229 similar to plant oxygen evolving complex polypeptide
7.03
GRMZM2G058070
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: July 18th, 2012
Gene Model: September 11th, 2018
3 months agofkf2 flavin-binding kelch repeat f-box2: Involved in regulating the circadian clock and photoperiodic flowering
 
GRMZM2G106363
Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Gene Product: July 25th, 2017
Gene Model: December 12th, 2017
3 months agokcs16 3-ketoacyl-CoA synthase16:
 
GRMZM2G160417
Liu, X et al. 2020. New Phytol pp.doi: 10.1111/nph.16837     Reference: August 3rd, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
3 months agopspb2 photosystem II oxygen evolving polypeptide2: sequence highly similar to OEC23 oxygen evolving complex protein of photosystem II; located peripheral to lumenal side of thylakoid (Huang et al 2013)
7.01
GRMZM2G047954
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: January 30th, 2019
3 months agolhcb5 light harvesting chlorophyll a/b binding protein5:
2.08
GRMZM2G149428
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Variation: February 19th, 2015
Gene Model: February 19th, 2015
3 months agoczog2 cis-zeatin O-glucosyltransferase2: enzymatic activity like that of czog1 but high in roots and low in kernels; 97.8% identity at amino acid level
8.07
GRMZM2G110511
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: March 20th, 2014
Variation: March 25th, 2009
Gene Model: March 21st, 2014
Recommended by Marty Sachs:
March 7th, 2007
3 months agohb75 Homeobox-transcription factor 75: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G001289
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Variation: September 1st, 2003
Gene Model: February 6th, 2018
3 months agodof3 DNA binding with one finger3: cDNA sequence distinct from dof1, dof2
6.01
GRMZM2G179069
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: April 18th, 2008
Gene Model: August 29th, 2013
3 months agocr4 crinkly4: crinkly seedling leaves; plants short with rough, sometimes knot-bearing, extremely crinkly leaves and club tassel; aleurone mosaic
10.02
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: July 17th, 2006
3 months agothk1 thick aleurone1: Mutants have a thick aleurone phenotype; encodes a NOT1 subunit of the CCR4-NOT complex
 
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: August 1st, 2020
Variation: August 1st, 2020
3 months agotubtf8 TUB-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 29th, 2015
3 months agoocl4 outer cell layer4:
1.05 - 1.06
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: December 6th, 2019
3 months agoczog1 cis-zeatin O-glucosyltransferase1: gene intronless, genomic and cDNA sequences identical (Martin et al., 2001 PNAS 98:5922); expression high in roots and kernels (compare czog2).
2.03
GRMZM2G168474
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: March 20th, 2014
Variation: October 25th, 2012
Gene Model: March 20th, 2014
3 months agonkd2 naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
10.06
GRMZM5G884137
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: January 3rd, 2015
Variation: December 21st, 2017
Gene Model: December 21st, 2017
3 months agomkkk16 MAP kinase kinase kinase16: Function inferred from sequence similarity (Kong 2013)
2.06
GRMZM2G098828
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: July 10th, 2013
Gene Model: July 11th, 2013
3 months agonkd1 naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
 
GRMZM2G129261
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
3 months agocsld1 cellulose synthase-like D1: participates in cell wall polysaccharides formation during cell division; mutants have narrow leaves
 
GRMZM2G015886
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: October 7th, 2016
Variation: October 18th, 2018
Gene Model: October 18th, 2018
3 months agothkl1 thick aleurone-like1: likely accounts for the ability of thk1 mutants to form viable cells
 
GRMZM5G827026
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: August 1st, 2020
Gene Model: August 1st, 2020
3 months agocadtfr12 CCAAT-DR1-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.03
GRMZM2G167576
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: August 9th, 2016
Gene Model: August 8th, 2016
3 months agocdc201 cell division cycle201:
4.06
GRMZM2G063192
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Variation: March 31st, 2005
Gene Model: November 18th, 2016
3 months agosmr5 siamese-related5:
9.08 - 9.08
GRMZM2G413337
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Variation: September 1st, 2003
Gene Model: June 27th, 2020
3 months agoumc1671  :
7.05
GRMZM2G041328
    Variation: September 1st, 2003
Gene Model: July 30th, 2020
3 months agosmr4 siamese-related4:
 
GRMZM2G019353
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: March 14th, 2018
3 months agosmr1 siamese-related1:
 
GRMZM2G013463
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
3 months agosmr2 siamese-related2: may have been primarily responsible for the endoreplication regulation of outer endosperm or aleurone cells
 
GRMZM2G144024
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
3 months agosmr3 siamese-related3:
 
GRMZM2G331766
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
3 months agosmr6 siamese-related6:
 
GRMZM2G090029
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
3 months agosmr7 siamese-related7:
 
GRMZM2G004898
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
3 months agosmr9 siamese-related9: may have regulated the initiation of endoreplication in endosperm central cells
 
GRMZM2G337190
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
3 months agosmr10 siamese-related10: may have been primarily responsible for the endoreplication regulation of outer endosperm or aleurone cells
 
GRMZM2G493549
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
3 months agosmr11 siamese-related11: may have regulated the initiation of endoreplication in endosperm central cells
 
GRMZM2G140032
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
3 months agosmr12 siamese-related12: may have regulated the initiation of endoreplication in endosperm central cells
 
GRMZM2G388297
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
3 months agopco129709  :
7.06
GRMZM2G140758
    Variation: September 25th, 2007
Gene Model: July 30th, 2020
3 months agosmr8 siamese-related8:
6.02
GRMZM5G897944
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Variation: March 31st, 2005
Gene Model: January 17th, 2020
3 months agothx43 Trihelix-transcription factor 43:
10.03
GRMZM2G110145
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 29th, 2020
Variation: September 1st, 2003
Gene Model: December 9th, 2017
3 months agothx21 Trihelix-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx1 Trihelix-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx10 Trihelix-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx12 Trihelix-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx13 Trihelix-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI 103626744 is similar to RNA-metabolising metallo-beta-lactamase family protein of A. thaliana
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx14 Trihelix-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx15 Trihelix-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx16 Trihelix-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx17 Trihelix-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx18 Trihelix-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx19 Trihelix-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx2 Trihelix-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx20 Trihelix-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to protein GT-2-like 1 of A. thaliana
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx22 Trihelix-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx23 Trihelix-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx24 Trihelix-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx25 Trihelix-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx26 Trihelix-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. This locus shares some 40% sequence similarity to aspartate/glutamate/uridylate kinase-like protein of A. thaliana, and where the function of the A. thaliana protein was assigned based on sequence similarity to another species. (Dec 2019 Updated)
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx27 Trihelix-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx28 Trihelix-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx29 Trihelix-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx3 Trihelix-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months agothx4 Trihelix-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
3 months ago