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CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The most recent updates can be found on our curation site or by clicking the Most Recent Data option in the menu below.


         Recommended Genes

Most recent data | Six months | One year | All time

New or updated genes since one year ago. The cutoff date is May 19th, 2018

Last UpdateGeneFull Name : DescriptionChromosome
or Bin		Gene
Model		Recent ReferenceOrthologsUpdate information
2 days agots5 tassel seed5: dominant Ts5 tassels are upright with scattered, short silks; branches mostly pistillate toward the base
4.03 - 4.05
 GRMZM2G177668
 Wang, F et al. 2019. J Integr Plant Biol pp.doi: 10.1111/jipb.12826     Reference: May 17th, 2019
Gene Product: March 25th, 2019
Variation: March 25th, 2019
Gene Model: March 25th, 2019
2 days agocpd33 carbohydrate partitioning defective33: mutants accumulate excess starch and soluble sugars in mature leaves
 
 GRMZM5G852378
 Tran, TM et al. 2019. Molecular Plant pp.doi: 10.1016/j.molp.2019.05.001     Reference: May 17th, 2019
Gene Product: May 17th, 2019
Variation: May 17th, 2019
Gene Model: May 17th, 2019
4 days agovp15 viviparous15: Viviparous with yellow endosperm; Vp15 encodes a plant MPT synthase small subunit (ZmCNX7)
5.05
    Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Gene Product: February 22nd, 2007
Variation: July 27th, 2009
Recommended by Marty Sachs:
March 7th, 2007
4 days agomus2 MutS homolog2: NCBI: DNA mismatch repair protein MSH7
3.02 - 3.03
 GRMZM2G110212
 Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Gene Product: August 15th, 2005
Variation: January 28th, 2013
Gene Model: August 5th, 2015
4 days agoumc1350  :
6.07
 GRMZM2G038284
 Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Variation: September 1st, 2003
Gene Model: August 29th, 2018
4 days agodof25 C2C2-Dof-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Gene Product: May 15th, 2019
4 days agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
    Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Gene Product: December 18th, 2014
Variation: December 17th, 2014
4 days agozfl1 zea floricaula/leafy1: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
10.06
    Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Variation: February 20th, 2007
4 days agocyp8 cytochrome P-450 8: developing inflorescence, cDNA clone, assayed in transgenic yeast microsomes
1.08
    Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y   LOC_Os10g26340 (MSU/TIGR) Reference: May 15th, 2019
Gene Product: September 1st, 2003
Variation: October 24th, 2012
4 days agoifa1 indeterminate floral apex1: mutants have perturbed floral and inflorescence meristems as well as droopy leaves with increased angle
 
 GRMZM2G088309
 Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR) 		Reference: May 15th, 2019
Gene Product: October 16th, 2015
Variation: July 13th, 2017
Gene Model: October 16th, 2015
4 days agoincw5 invertase cell wall5:
 
 GRMZM2G095725
 Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y   LOC_Os04g33740 (MSU/TIGR) Reference: May 15th, 2019
Gene Product: June 12th, 2018
Variation: August 16th, 2017
Gene Model: August 16th, 2017
4 days agoIDP727  : similar to xyloglucan:xyloglucosyl transferase of A. thaliana
7.03
 GRMZM2G413044
 Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Variation: March 31st, 2005
Gene Model: February 5th, 2019
5 days agosrk1 S-receptor kinase1: single copy leaf cDNA, csu811, similar to S-receptor kinase of Brassica; locus is absent from inbred GT119
2.09
 AC217293.3_FG007
 Qi, FK et al. 2019. Plant Dis pp.doi: 10.1094/PDIS-09-18-1687-RE     Reference: May 14th, 2019
Gene Product: July 1st, 2015
Variation: September 1st, 2003
Gene Model: July 1st, 2015
5 days agonldr2 NBS-LRR disease resistance protein2: appears to be involved in the response to Sporisorium reilianum infection
 
 GRMZM2G047152
 Qi, FK et al. 2019. Plant Dis pp.doi: 10.1094/PDIS-09-18-1687-RE     Reference: May 14th, 2019
Gene Product: May 14th, 2019
Gene Model: May 14th, 2019
5 days agonldr1 NBS-LRR disease resistance protein1: appears to be involved in the response to Sporisorium reilianum infection
 
 GRMZM2G078013
 Qi, FK et al. 2019. Plant Dis pp.doi: 10.1094/PDIS-09-18-1687-RE     Reference: May 14th, 2019
Gene Product: May 14th, 2019
Gene Model: May 14th, 2019
6 days agoemp602 empty pericarp602: mutants have an empty pericarp; loss of mature Nad4 transcripts
 
 GRMZM2G464510
 Ren, ZJ et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz083   AT1G02420 (TAIR)
LOC_Os03g11020 (MSU/TIGR) 		Reference: May 13th, 2019
Gene Product: December 27th, 2016
Variation: May 13th, 2019
Gene Model: May 13th, 2019
11 days agohmg13 HMG-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: May 8th, 2019
11 days agobhlh172 bHLH-transcription factor 172: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Kurt, F et al. 2019. BioMetals doi: 10.1007/s10534-019-00199-z   AT1G51070 (TAIR) Reference: May 8th, 2019
Gene Product: September 14th, 2016
11 days agoaasr3 abscisic acid stress ripening3:
2.04
 GRMZM5G806182
 Liang, YN et al. 2019. Int J Mol Sci 20:2278     Reference: May 8th, 2019
Gene Product: December 1st, 2011
Gene Model: January 2nd, 2019
12 days agots6 tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement.
1.11
 GRMZM5G862109
 Wang, J et al. 2019. New Phytol pp.doi: 10.1111/nph.15890     Reference: May 7th, 2019
Gene Product: February 27th, 2017
Variation: December 4th, 2013
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
15 days agoereb160 AP2-EREBP-transcription factor 160: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.01
 GRMZM2G171179
 Yu, F et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13140     Reference: May 4th, 2019
Variation: September 1st, 2003
Gene Model: September 25th, 2015
15 days agonactf108 NAC-transcription factor 108: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.functions as a negative regulator of the stay‐green trait
 
    Zhang, J et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13139     Reference: May 4th, 2019
Gene Product: September 22nd, 2015
Variation: May 4th, 2019
18 days agokn1 knotted1: dominant Kn1 plants have localized proliferation of tissue at vascular bundles on leaf
1.10
    Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Variation: December 6th, 2013
18 days agora3 ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis
7.06
    Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: May 1st, 2019
Gene Product: September 15th, 2013
Variation: December 3rd, 2010
18 days agoufo1 unstable factor for orange1: dominant Ufo1 plants have orange color in anthers, silks, and most other plant parts in presence of P1-wr or P1-rr; growth retarded
10.03
 GRMZM2G053177
 Wittmeyer, KT, et al. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00546     Reference: May 1st, 2019
Variation: December 19th, 2018
Gene Model: December 19th, 2018
18 days agomyb31 MYB31 transcription factor31: R2R3-MYB factor, regulates lignin genes
 
 GRMZM2G050305
 Li, M et al. 2019. Mol Biol Rep pp.doi: 10.1007/s11033-019-04840-5   LOC_Os09g36730 (MSU/TIGR) Reference: May 1st, 2019
Gene Product: February 16th, 2011
Variation: May 6th, 2011
Gene Model: November 30th, 2015
18 days agoubi1 ubiquitin1: genomic sequence, 7 contiguous direct ubiquitin repeats; transcript specific probe; promoter active in monocots, not in tobacco
 
 GRMZM2G409726
 Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Gene Product: September 1st, 2003
Variation: November 20th, 2014
Gene Model: November 18th, 2014
18 days agodof36 C2C2-Dof-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Wu, JD et al. 2019. Frontiers Plant Sci 10:465     Reference: May 1st, 2019
Variation: October 7th, 2016
18 days agotrpp4 trehalose-6-phosphate phosphatase4: double mutants with ra3 give a more extreme phenotype
4.08
 GRMZM2G151044
 Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: May 1st, 2019
Gene Product: September 15th, 2013
Variation: April 2nd, 2019
Gene Model: June 7th, 2018
18 days agorbm48 RNA binding motif protein 48: Encodes a U12 splicing factor; mutants have a rough endosperm phenotype
 
 GRMZM2G163247
 Bai, F, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00754     Reference: May 1st, 2019
Gene Product: March 7th, 2019
Variation: March 7th, 2019
Gene Model: February 15th, 2019
18 days agozag1 Zea AGAMOUS homolog1: amino acid sequence, deduced from cDNA to inflorescence mRNA, 61% identical to Arabidopsis floral homeotic gene protein AG1; expression strong in female inflorescence; possibly pt1; SSR umc1187
6.05
    Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Gene Product: September 1st, 2003
Variation: January 2nd, 2015
18 days agosi1 silky1: (aka ts8, ms-si) multiple silks in ear; sterile tassel with silks
6.01
    Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Variation: November 2nd, 2015
18 days agokrp11 kinesin-related protein11: Mutants exhibit a varied-kernel-size phenotype - segregated small seeds of varying sizes (Huang et al., 2019)
7.00
 GRMZM2G436981
 Huang, YC, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00966     Reference: May 1st, 2019
Gene Product: November 10th, 2017
Variation: April 9th, 2019
Gene Model: July 30th, 2015
18 days agodrl2 drooping leaf2: mutant enhances the phenotype of ifa1 mutants (a.k.a. drl1)
9.06
 GRMZM2G102218
 Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR) 		Reference: May 1st, 2019
Gene Product: October 16th, 2015
Variation: July 12th, 2017
Gene Model: October 16th, 2015
18 days agorgh3 rough endosperm3: Mature rgh3 seeds show a rough, etched, or pitted endosperm surface as well as a reduced seed size
 
 GRMZM2G128228
 Bai, F, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00754     Reference: May 1st, 2019
Gene Product: December 29th, 2011
Variation: December 29th, 2011
Gene Model: April 29th, 2013
18 days agotrpp12 trehalose-6-phosphate phosphatase12:
 
 GRMZM2G178546
 Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: May 1st, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
18 days agocyp27 cytochrome P-450 27: close paralog to ts5 (Lunde et al., 2019)
 
 GRMZM2G164074
 Lunde, C; Kimberlin, A; Leiboff, S; Koo, AJ; Hake, S. 2019. 2:114     Reference: May 1st, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
18 days agotrpp13 trehalose-6-phosphate phosphatase13:
 
 GRMZM5G890599
 Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: May 1st, 2019
Gene Product: September 15th, 2013
Gene Model: April 2nd, 2019
18 days agotrpp14 trehalose-6-phosphate phosphatase14:
 
    Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: May 1st, 2019
Gene Product: September 15th, 2013
18 days agoyab15 yabby15:
5.05
    Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Gene Product: October 16th, 2015
Variation: December 30th, 2014
20 days agol15 luteus15: like l4; lethal yellow seedling; chloroplast mRNA processing.Chloroplast PPR protein. Activates atpH translation. Stabilizes atpH and psaJ RNA termini. Binds atpI-atpH and psaJ-rpl33 intergenic regions. (A. Barkan, 2015)
6.02 - 6.03
 GRMZM2G177169
 Rojas, M et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0412-1   AT2G18940 (TAIR)
LOC_Os05g19380 (MSU/TIGR)
Os05g0275000 (Gramene) 		Reference: April 29th, 2019
Gene Product: December 30th, 2015
Variation: November 7th, 2012
Gene Model: November 6th, 2012
20 days agoatpH (cp) ATPaseH:
 
    Rojas, M et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0412-1     Reference: April 29th, 2019
Gene Product: October 21st, 2003
22 days agomatl1 matrilineal1: encodes a pollen-specific phospholipase; novel edits lead to a 6.7% haploid induction rate
 
 GRMZM2G471240
 Wang, S et al. 2019. Plant Methods 15:42     Reference: April 27th, 2019
Gene Product: March 14th, 2017
Variation: February 10th, 2017
Gene Model: January 25th, 2017
22 days agocenH3 centromeric histone H3:
6.06
 GRMZM2G158526
 Wang, S et al. 2019. Plant Methods 15:42     Reference: April 27th, 2019
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
24 days agoms33 male sterile33:
2.09
 GRMZM2G070304
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y   LOC_Os11g45400 (MSU/TIGR) Reference: April 25th, 2019
Gene Product: March 25th, 2019
Variation: December 4th, 2018
Gene Model: March 17th, 2018
24 days agogpat1 glycerol-3-phosphate acyltransferase1:
3.06
 GRMZM2G083195
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Variation: March 23rd, 2015
Gene Model: March 24th, 2015
24 days agogpat15 glycerol-3-phosphate acyltransferase15:
 
 GRMZM2G159890
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat7 glycerol-3-phosphate acyltransferase7:
 
 GRMZM2G064590
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat2 glycerol-3-phosphate acyltransferase2:
 
 GRMZM2G147917
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat3 glycerol-3-phosphate acyltransferase3:
 
 GRMZM2G156729
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat5 glycerol-3-phosphate acyltransferase5:
 
 GRMZM2G072298
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat6 glycerol-3-phosphate acyltransferase6:
 
 GRMZM2G033767
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat8 glycerol-3-phosphate acyltransferase8:
 
 GRMZM2G065203
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat9 glycerol-3-phosphate acyltransferase9:
 
 GRMZM2G131378
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat10 glycerol-3-phosphate acyltransferase10:
 
 GRMZM2G020320
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat11 glycerol-3-phosphate acyltransferase11:
 
 GRMZM2G059637
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat12 glycerol-3-phosphate acyltransferase12:
 
 GRMZM2G166176
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat13 glycerol-3-phosphate acyltransferase13:
 
 GRMZM2G177150
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat14 glycerol-3-phosphate acyltransferase14:
 
 GRMZM2G123987
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
24 days agogpat16 glycerol-3-phosphate acyltransferase16:
 
 GRMZM2G124042
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: April 25th, 2019
24 days agogpat17 glycerol-3-phosphate acyltransferase17:
 
    Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
24 days agogpat18 glycerol-3-phosphate acyltransferase18:
 
    Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
24 days agogpat19 glycerol-3-phosphate acyltransferase19:
 
 GRMZM2G165681
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: April 25th, 2019
24 days agogpat20 glycerol-3-phosphate acyltransferase20:
 
 GRMZM2G075295
 Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: April 25th, 2019
24 days agodek41 defective kernel41: mutations cause reduced splicing efficiency of mitochondrial nad4 intron 3, resulting in severely reduced complex I assembly and NADH dehydrogenase activity
 
 GRMZM2G127015
 Zhu, CG et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz193     Reference: April 25th, 2019
Gene Product: December 27th, 2016
Variation: April 25th, 2019
Gene Model: April 25th, 2019
25 days agozep1 zeaxanthin epoxidase1:
2.04
 GRMZM2G127139
 Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
25 days agolyce1 lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids
8.05
 GRMZM2G012966
 Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: December 10th, 2011
Variation: October 3rd, 2011
Gene Model: October 3rd, 2011
25 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
    Wang, W et al. 2019. Genes 10:316     Reference: April 24th, 2019
Gene Product: September 1st, 2003
Variation: June 6th, 2016
25 days agops1 pink scutellum1: (aka vp7, lyc1, lycB) some alleles viviparous; endosperm and scutellum pink, seedling white with pink flush
5.04 - 5.04
    Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: December 10th, 2011
Variation: March 30th, 2011
25 days agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
    Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: December 13th, 2011
Variation: March 4th, 2014
25 days agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
 GRMZM2G300348
 Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
25 days agodxs3 deoxy xylulose synthase3:
 
 GRMZM2G173641
 Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: August 17th, 2004
Variation: February 15th, 2012
Gene Model: December 9th, 2011
25 days agoo*-QCL3024 opaque*-QCL3024: mutant has opaque/high-lysine endosperm
 
    Wang, W et al. 2019. Genes 10:316     Reference: April 24th, 2019
Variation: February 16th, 2013
25 days agodmes1 diphosphocytidyl methyl erythritol synthase1: encodes 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase
6.01
 GRMZM5G856881
 Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: March 7th, 2014
Gene Model: October 4th, 2014
25 days agodxs2 deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes
9.03
 GRMZM2G493395
 Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: August 17th, 2004
Variation: February 15th, 2012
Gene Model: December 9th, 2011
25 days agovp14 viviparous14: viviparous; yellow endosperm; abscisic acid biosynthesis; SSR umc1218
1.08
 GRMZM2G014392
 Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: September 20th, 2012
Variation: June 25th, 2007
Gene Model: May 13th, 2011
30 days agosweet1b sugars will eventually be exported transporter1b: encodes a functional glucose transporter expressed in subsidiary cells; mutants result in reduced stomatal opening
 
 GRMZM2G153358
 Wang, H et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00736     Reference: April 19th, 2019
Gene Product: November 4th, 2015
Variation: April 19th, 2019
Gene Model: November 3rd, 2015
33 days agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
    Dooner, HK et al. 2019. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1903809116     Reference: April 16th, 2019
Gene Product: July 4th, 2018
Variation: November 20th, 2018
33 days agosh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
    Dooner, HK et al. 2019. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1903809116     Reference: April 16th, 2019
Gene Product: October 25th, 2006
Variation: September 25th, 2017
33 days agoremo3 remorin3: mutants are more susceptible to to Southern corn rust
 
 GRMZM2G122937
 Wang, SX et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13129     Reference: April 16th, 2019
Gene Product: September 24th, 2018
Variation: April 16th, 2019
Gene Model: April 16th, 2019
34 days agofcp1 fon2-like cle protein1: mutants have a fasciated ear phenotype
 
 GRMZM2G165836
 Rodriguez-Leal, D et al. 2019. Nature Genetics pp.DOI: 10.1038/s41588-019-0389-8   LOC_Os04g39770 (MSU/TIGR)
Os04g0473800 (Gramene) 		Reference: April 15th, 2019
Gene Product: May 21st, 2016
Variation: April 15th, 2019
Gene Model: May 21st, 2016
34 days agocle7 clavata3/esr-related7: mutants have fasciated ears
 
 GRMZM2G372364
 Rodriguez-Leal, D et al. 2019. Nature Genetics pp.DOI: 10.1038/s41588-019-0389-8     Reference: April 15th, 2019
Variation: April 15th, 2019
Gene Model: September 15th, 2016
37 days agobx1 benzoxazinless1: plastid localized, committed step in cyclic hydroxamates/DIMBOA synthesis; insect resistance in young seedlings; SSR umc1022
4.00
 GRMZM2G085381
 Kudjordjie, EN et al. 2019. Microbiome 7:59     Reference: April 12th, 2019
Gene Product: October 14th, 2011
Variation: April 12th, 2019
Gene Model: October 14th, 2011
37 days agobx2 benzoxazinone synthesis2: endoplasmic reticulum P450 monoxygenase; synthesis cyclic hyroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1164, umc1682
4.01
 GRMZM2G085661
 Kudjordjie, EN et al. 2019. Microbiome 7:59     Reference: April 12th, 2019
Gene Product: April 8th, 2013
Variation: April 12th, 2019
Gene Model: October 24th, 2011
37 days agobx6 benzoxazinone synthesis6: cytosolic 2-oxoglutarate-dependent dioxygenase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1232
4.01
    Kudjordjie, EN et al. 2019. Microbiome 7:59     Reference: April 12th, 2019
Gene Product: June 20th, 2016
Variation: April 12th, 2019
39 days agorlsb1 rbcl rna s1-binding domain protein1: Chloroplast RNA binding protein. (A. Barkan, 2015)encodes RLSB mRNA binding proteinplastid RNA-chaperone-like protein (Jiang et al., 2019)
 
 GRMZM2G087628
 Jiang, JJ et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00946   AT1G71720 (TAIR) Reference: April 10th, 2019
Gene Product: July 1st, 2016
Variation: April 10th, 2019
Gene Model: October 19th, 2013
39 days agobm5 brown midrib5: bm5 encodes 4-coumarate-CoA ligase (Xiong et al., 2019)
5.04
 GRMZM2G075333
 Xiong, WD et al. 2019. Biotechnology for Biofuels. 12:82     Reference: April 10th, 2019
Gene Product: April 1st, 2017
Variation: April 10th, 2019
Gene Model: June 23rd, 2016
43 days agofl1 floury endosperm1: (was o4) endosperm opaque, soft; dosage effect with fl1-ref allele, but o4 allele is recessive
2.04
 GRMZM2G094532
 Vanous, A et al. 2019. Plant Genome 12:170114     Reference: April 6th, 2019
Gene Product: July 8th, 2013
Variation: September 16th, 2010
Gene Model: July 8th, 2013
43 days agoo10 opaque endosperm10: like o1
 
 GRMZM2G346263
 Vanous, A et al. 2019. Plant Genome 12:170114     Reference: April 6th, 2019
Gene Product: August 20th, 2016
Variation: August 20th, 2016
Gene Model: August 20th, 2016
43 days agoemp16 empty pericarp16: mutant homozyous kernels have empty pericarp and are non-viable.
 
 GRMZM2G060516
 Vanous, A et al. 2019. Plant Genome 12:170114     Reference: April 6th, 2019
Gene Product: December 27th, 2016
Variation: January 16th, 2016
Gene Model: January 16th, 2016
44 days agolhca1 light harvesting complex A1: leaf cDNA csu800 similar to photosystem I antenna protein
2.08
 GRMZM2G038519
 Septiani, P et al. 2019. Sci. Rep. 9:5665     Reference: April 5th, 2019
Gene Product: September 1st, 2003
Variation: February 18th, 2015
Gene Model: February 18th, 2015
44 days agoaco5 aconitase5:
2.07
    Septiani, P et al. 2019. Sci. Rep. 9:5665     Reference: April 5th, 2019
Gene Product: September 1st, 2003
Variation: April 5th, 2019
44 days agotua5 alpha tubulin5: alpha tubulin subfamily II with tua6; gene specific cDNA probe
2.08
    Septiani, P et al. 2019. Sci. Rep. 9:5665     Reference: April 5th, 2019
Gene Product: September 1st, 2003
Variation: August 16th, 2013
44 days agomkkk27 MAP kinase kinase kinase27: function inferred from sequence similarity (Kong et al 2013)
2.08
 GRMZM2G089159
 Septiani, P et al. 2019. Sci. Rep. 9:5665     Reference: April 5th, 2019
Gene Product: July 10th, 2013
Gene Model: July 11th, 2013
44 days agoaprl2 adenosine 5'-phosphosulfate reductase-like2:
2.07
 GRMZM2G087254
 Septiani, P et al. 2019. Sci. Rep. 9:5665     Reference: April 5th, 2019
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
46 days agoarid7 ARID-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj1 JUMONJI-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
46 days agojmj10 JUMONJI-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj11 JUMONJI-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj12 JUMONJI-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj13 JUMONJI-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
46 days agojmj14 JUMONJI-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj16 JUMONJI-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj17 JUMONJI-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
46 days agojmj18 JUMONJI-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj19 JUMONJI-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj2 JUMONJI-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
46 days agojmj20 JUMONJI-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj21 JUMONJI-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj22 JUMONJI-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj3 JUMONJI-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
46 days agojmj4 JUMONJI-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj5 JUMONJI-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
46 days agojmj6 JUMONJI-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj7 JUMONJI-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj8 JUMONJI-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj9 JUMONJI-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
46 days agojmj15 JUMONJI-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.06
    Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
48 days agozag4 zea agamous4: genomic clone: distinct leaf and endosperm transcripts attributed to alternative splicing; contains zag1-like MADS box; SSR umc1183
3.03
 GRMZM2G471089
 Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 1st, 2019
50 days agocrs4 chloroplast RNA splicing4: pale yellow green seedling lethal; splicing of ndhA and ndhB transcprits (uncertain if in crs4 or crs4a)
 
 GRMZM2G481231
 Wei, KF; Han, P. 2016. Mol Breed 36:170     Reference: December 26th, 2016
Gene Product: September 15th, 2012
Variation: December 27th, 2016
Gene Model: March 30th, 2019
50 days agomab31 math-btb31:
 
 GRMZM2G091251
 Juranic, M et al. 2012. Plant Cell 24:4974-4991     Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: March 30th, 2019
52 days agobzip1 bZIP transcription factor1:
3.08
 GRMZM2G117851
 Zhang, YM et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00322     Reference: March 28th, 2019
Gene Model: September 30th, 2015
Recommended by Ed Coe:
January 8th, 2008
52 days agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
    Bahaji, A et al. 2019. Frontiers Plant Sci pp.doi: 10.3389/fpls.2019.00242     Reference: March 28th, 2019
Gene Product: February 24th, 2015
Variation: March 16th, 2018
52 days agogl6 glossy6: like gl1, but seedling leaf surface bright green instead of bluish
3.05 - 3.05
 GRMZM2G139786
 Li, L et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz131     Reference: March 28th, 2019
Gene Product: March 28th, 2019
Variation: July 28th, 2018
Gene Model: July 28th, 2018
52 days agolg2 liguleless2: like lg1, less extreme
3.06
    Zhang, YM et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00322     Reference: March 28th, 2019
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
52 days agovp1 viviparous1: embryo fails to become dormant, viable if transplanted; some alleles dormant; chlorophyll and carotenoids unaffected; anthocyanins in aleurone suppressed (aka vp4); cDNA
3.05
    Zhang, YM et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00322     Reference: March 28th, 2019
Gene Product: July 29th, 2015
Variation: August 22nd, 2013
52 days agorafs1 raffinose synthase1: mutants have significantly reduced seed vigor
3.03
 GRMZM2G150906
 Zhang, YM et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00322     Reference: March 28th, 2019
Variation: March 23rd, 2018
Gene Model: March 23rd, 2018
52 days agogols3 galactinol synthase3: Expessed late in seed development
9.04
 GRMZM5G872256
 Zhang, YM et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00322     Reference: March 28th, 2019
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
52 days agogpm46  : ubiquitous expression; putative adenylate translocase
9.03
 GRMZM2G174738
 Bahaji, A et al. 2019. Frontiers Plant Sci pp.doi: 10.3389/fpls.2019.00242     Reference: March 28th, 2019
Gene Product: February 24th, 2015
Gene Model: February 24th, 2015
52 days agobzip127 bZIP-transcription factor 127: similar to Arabidopsis basic leucine zipper transcription factor-like protein (NCBI)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
 GRMZM2G175280
 Zhang, YM et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00322     Reference: March 28th, 2019
Variation: September 6th, 2017
Gene Model: September 6th, 2017
55 days agopep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
    Gorska, A et al. 2019. Plant J pp.doi: 10.1111/tpj.14323     Reference: March 25th, 2019
Gene Product: September 1st, 2003
Variation: May 11th, 2018
55 days agocyp25 cytochrome P-450 25:
4.09
 GRMZM2G070508
 Yoneyama, K et al. 2018. New Phytol pp.doi: 10.1111/nph.15055     Reference: February 27th, 2018
Gene Product: March 25th, 2019
Gene Model: June 8th, 2018
55 days agoben1 bentazon resistance1: recessive susceptibility to nicosulfuron (Accent) and mesotrione herbicidesDominant Ben1 resistant, with Ben2
5.01
 GRMZM2G090432
 Liu, XM et al. 2019. Theor Appl Genet pp.doi:10.1007/s00122-019-03282-8     Reference: January 17th, 2019
Gene Product: March 25th, 2019
Variation: February 12th, 2010
Gene Model: July 27th, 2016
55 days agocyp22 cytochrome P-450 22:
 
 GRMZM2G067591
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: March 25th, 2019
Gene Model: February 26th, 2018
55 days agocyp23 cytochrome P-450 23:
 
 GRMZM2G018612
 Yoneyama, K et al. 2018. New Phytol pp.doi: 10.1111/nph.15055     Reference: February 27th, 2018
Gene Product: March 25th, 2019
Gene Model: February 27th, 2018
55 days agocyp24 cytochrome P-450 24:
 
 GRMZM2G023952
 Yoneyama, K et al. 2018. New Phytol pp.doi: 10.1111/nph.15055     Reference: February 27th, 2018
Gene Product: March 25th, 2019
Gene Model: February 27th, 2018
55 days agocyp26 cytochrome P-450 26:
 
 GRMZM2G087875
 Panozzo, A et al. 2019. Frontiers Plant Sci 10:62     Reference: February 20th, 2019
Gene Product: March 25th, 2019
Gene Model: November 30th, 2018
57 days agockx7 cytokinin oxidase7:
 
 GRMZM2G114427
 Gu, R et al. 2010. J Plant Growth Reg 29:428-440     Reference: March 28th, 2014
Gene Product: April 4th, 2014
Gene Model: March 23rd, 2019
58 days agocol9 C2C2-CO-like-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to zinc finger protein CONSTANS-LIKE 9 of A. thaliana
 
 GRMZM2G042198
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: March 22nd, 2019
58 days agockx8 cytokinin oxidase8:
 
 GRMZM2G114427
 Gu, R et al. 2010. J Plant Growth Reg 29:428-440     Reference: March 28th, 2014
Gene Product: April 4th, 2014
Gene Model: March 22nd, 2019
60 days agoms20 male sterile20: mutants are male sterile and exhibit a glossy outer anther surface, abnormal Ubish bodies, and defective pollen exinedegeneration obvious by mid-vacuolated microspore stage
1.00 - 1.05
 GRMZM2G434500
 Wang, YB et al. 2019. Int J Mol Sci 20:1411   AT1G12570 (TAIR) Reference: March 20th, 2019
Gene Product: November 16th, 2016
Variation: March 20th, 2019
Gene Model: November 16th, 2016
61 days agotrps12 trehalose-6-phosphate synthase12: similar to alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 of A. thaliana
 
 GRMZM2G133966
 Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: September 15th, 2013
Gene Model: March 19th, 2019
68 days agogl8b 3-ketoacyl reductase GL8B: encodes fatty acid elongase, paralogous to gl8, maps in syntenous region, expression distinct but similar, double mutant embryos are non-viable
4.05
 GRMZM2G087323
 Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: March 6th, 2007
Variation: December 6th, 2012
Gene Model: February 20th, 2015
Recommended by Marty Sachs:
March 7th, 2007
68 days agogl8 glossy8: (was gl10) like gl1; cuticle wax in rice-grain-type particles; cDNA probesimilar to Arabidopsis beta-ketoacyl reductase 1
5.05
    Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: September 1st, 2003
Variation: June 14th, 2012
68 days agogl26 glossy26: like gl1similar to Arabidopsis enoyl reductase
8.02
 GRMZM2G481843
 Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: September 17th, 2018
68 days agoggt1 geranylgeranyl transferase1: when expressed in maize callus, it as more resistant to maize insect pests and ear rot fungi
 
 GRMZM2G151087
 Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: January 9th, 2018
Gene Model: January 8th, 2018
68 days agoelo1 elongation defective-like1:
 
 GRMZM2G037152
 Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: November 1st, 2018
Gene Model: March 12th, 2019
68 days agokcs1 3-ketoacyl-CoA synthase1:
8.03
 GRMZM2G393897
 Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: November 1st, 2018
Gene Model: March 12th, 2019
72 days agoaasr1 abscisic acid stress ripening1: protects the major ARS protein in maize; protects kernel yield under water deficit; SSR pio059, IDP9044
10.02
 GRMZM2G136910
 Yao, CT et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09934-9     Reference: March 8th, 2019
Gene Product: January 2nd, 2019
Variation: December 30th, 2011
Gene Model: November 1st, 2011
72 days agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
    Wu, XY et al. 2019. Genet Resour Crop Evol pp.doi: 10.1007/s10722-019-00763-z     Reference: March 8th, 2019
Gene Product: June 4th, 2008
Variation: March 8th, 2019
72 days agobzip22 bZIP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Dong, Q et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.03.001   AT1G43700 (TAIR) Reference: March 8th, 2019
Gene Product: August 21st, 2018
Variation: September 24th, 2018
72 days agotpj1 translation of psbJ1: encodes a chloroplast-localized PPR protein that is required for the translation of the chloroplast psbJ ORF
 
 GRMZM2G056116
 Williams-Carrier, R et al. 2019. Plant J pp.doi: 10.1111/tpj.14308   AT3G46610 (TAIR) Reference: March 8th, 2019
Gene Product: December 27th, 2016
Variation: March 8th, 2019
Gene Model: March 14th, 2018
75 days agorel2 ramosa1 enhancer locus2: rel2 mutants dramatically increase the formation of long branches in ears of both ra1 and ra2 mutants
10.03
    Liu, X; Galli, M; Camehl, I; Gallavotti, A. 2018. Plant Physiol. 0:doi: 10.1104/pp.18.00913     Reference: March 5th, 2019
Gene Product: October 23rd, 2018
Variation: October 23rd, 2018
75 days agotpl1 topless-related1:
 
 GRMZM2G316967
 Liu, X; Galli, M; Camehl, I; Gallavotti, A. 2018. Plant Physiol. 0:doi: 10.1104/pp.18.00913     Reference: March 5th, 2019
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
75 days agotpl2 topless-related2:
 
 GRMZM2G030422
 Liu, X; Galli, M; Camehl, I; Gallavotti, A. 2018. Plant Physiol. 0:doi: 10.1104/pp.18.00913     Reference: March 5th, 2019
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
75 days agorelk3 rel2-like3:
9.06
 GRMZM2G550865
 Liu, X; Galli, M; Camehl, I; Gallavotti, A. 2018. Plant Physiol. 0:doi: 10.1104/pp.18.00913     Reference: March 5th, 2019
Gene Product: October 23rd, 2018
Gene Model: October 23rd, 2018
76 days agoatg12 autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development.
 
 GRMZM5G842517
 McLoughlin, F, et al. 2018. Nature Plants. 0:doi: 10.1038/s41477-018-0299-2     Reference: March 4th, 2019
Variation: August 15th, 2017
Gene Model: August 15th, 2017
79 days agowgs1 white green sectors1: white seedling with green sectors
5.07 - 5.08
    Neuffer, MG and England, DJ. 1995. MNL 69:43-46     Reference: September 1st, 2003
Variation: March 1st, 2019
79 days agozag2 Zea AGAMOUS homolog2: amino acid sequence, deduced from cDNA sequence, has 49% identity to Arabidopsis, floral homeotic gene product; expression restricted to female inflorescence; near ts4
3.05 - 3.05
    Dong, Q et al. 2019. Sci. Rep. 9:3253     Reference: March 1st, 2019
Gene Product: April 1st, 2011
Variation: October 22nd, 2014
81 days agomre11a meiotic recombination protein 11 homolog A: transgenic expression has positive role in plant salt tolerance (Luo et al., 2019)
 
 GRMZM2G106056
 Luo, X et al. 2019. J Integr Plant Biol pp.doi: 10.1111/jipb.12797     Reference: February 27th, 2019
Variation: May 10th, 2017
Gene Model: January 27th, 2017
82 days agocah6 carbonic anhydrase6: predicted beta carbonic anhydrase
8.06
 GRMZM2G094165
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Gene Model: July 31st, 2014
82 days agocah2 carbonic anhydrase2: with cah1 promotes leaf CO2 availability for photosynthesis (Studer et al 2014)
 
 GRMZM2G348512
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Variation: May 25th, 2018
Gene Model: July 31st, 2014
82 days agocah3 carbonic anhydrase3:
 
 GRMZM2G348512
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Gene Model: August 5th, 2014
82 days agocah1 carbonic anhydrase1: C4 carbonic anhydrase; higher transcripts in mesophyll cells (Tausta 2014); double mutants with cah2 virutally remove this activity from leaf (Studer et al 2014).
 
 GRMZM2G121878
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Variation: May 25th, 2018
Gene Model: July 31st, 2014
82 days agocah4 carbonic anhydrase4: putative mitochondrial carbonic anhydrase (Studer et al 2014)
 
 GRMZM2G414528
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Gene Model: July 31st, 2014
82 days agocah5 carbonic anhydrase5: predicted mitochondrial carbonic anhydrase
 
 GRMZM2G145101
 Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Gene Model: July 31st, 2014
83 days agodef4 defensin-like protein4:
 
 GRMZM2G153488
 Vi, TXT et al. 2019. Mol Biol Rep pp.doi: 10.1007/s11033-019-04670-5     Reference: February 25th, 2019
Gene Product: July 25th, 2018
Gene Model: September 16th, 2017
83 days agoIDP137  :
3.07
 GRMZM2G176912
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP1480  : simiar to DEAD-box ATP-dependent RNA helicase 14 of A. thaliana
3.09
 GRMZM2G078826
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP149  : similar to proteasome subunit alpha type-3 A. thaliana
3.06
 GRMZM2G445100
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP158  :
3.09
 GRMZM2G175076
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP1617  : similar to 3-hydroxyisobutyrate dehydrogenase of A. thaliana
3.07
 GRMZM5G818186
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP2348  : similar to pinoid-binding protein 1 of A. thaliana
3.06
 GRMZM2G062283
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP2368  :
3.07
 GRMZM2G042548
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP253  :
3.09
 GRMZM2G094428
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP264  :
3.06
 GRMZM2G096920
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP284  :
3.09
 GRMZM2G463032
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP366  :
3.07
 GRMZM2G042099
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP427  :
3.09
 GRMZM2G034943
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP494  :
3.09
 GRMZM2G049866
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP518  :
3.09
 GRMZM2G120619
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP546  : similar to glyoxalase II 3 of A. thaliana
3.08
 GRMZM5G816356
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP624  :
3.09
 GRMZM2G019386
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP748  :
3.08
 GRMZM2G092152
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP783  : similar to lavodoxin-like protein of A. thaliana
3.07
 GRMZM2G069865
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agoIDP798  :
3.09
 GRMZM2G036050
     Variation: March 31st, 2005
Gene Model: February 25th, 2019
83 days agopco139502b  :
3.08
 GRMZM2G152686
 Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: April 8th, 2011
Variation: April 17th, 2008
Gene Model: February 25th, 2019
84 days agoumc2269  :
3.06
 GRMZM2G145753
     Variation: February 24th, 2019
Gene Model: April 3rd, 2018
84 days agoIDP138  :
3.05
 GRMZM2G439884
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP1433  :
3.05
 GRMZM2G155096
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP1696  : similar to vacuolar protein sorting 55 domain-containing protein of A. thaliana
3.05
 GRMZM2G174221
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP1698  :
3.05
 GRMZM2G099496
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP227  :
3.05
 AC209377.3_FG003
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP351  :
3.09
 GRMZM2G057853
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP49  :
3.05
 GRMZM2G136262
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP583  :
3.08
 GRMZM2G178244
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP667  :
3.05
 GRMZM2G006277
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP692  :
3.05
 GRMZM2G349187
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP73  : similar to beta-galactosidase 10 of A. thaliana
3.06
 GRMZM2G038281
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
84 days agoIDP813  : similar to 50S ribosomal protein L13 of A. thaliana
3.07
 GRMZM2G043212
     Variation: March 31st, 2005
Gene Model: February 24th, 2019
85 days agomkk3 MAP kinase kinase3: stress response; induced by abscisic acid
 
 GRMZM2G004468
 Zhang, M; et al. 2012. J Plant Physiol. 169:1501-10     Reference: July 10th, 2013
Gene Product: July 10th, 2013
Gene Model: February 23rd, 2019
85 days agosweet17a sugars will eventually be exported transporter17a:
 
 GRMZM2G106462
 Sosso, D et al. 2015. Nature Genetics 47:1489-1493     Reference: February 17th, 2017
Gene Product: November 4th, 2015
Variation: February 23rd, 2019
Gene Model: November 3rd, 2015
85 days agoIDP125  : similar to Optic atrophy 3 protein (OPA3) of A. thaliana
3.00
 GRMZM2G047509
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP1475  :
3.04
 GRMZM2G326465
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP1634  :
3.04
 GRMZM2G119778
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP2429  :
3.00
 GRMZM2G093104
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP2443  : similar to syntaxin-22 of A. thaliana
3.04
 GRMZM2G120115
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP319  :
3.04
 GRMZM2G135322
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP370  :
3.04
 GRMZM2G108847
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP428  :
3.04
 GRMZM2G033626
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP491  :
3.04
 GRMZM2G034896
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP506  :
3.05
 GRMZM2G301172
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP664  : similar to Enolase-phosphatase E1 of A. thaliana
3.04
 GRMZM2G111164
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP703  :
3.01
 GRMZM2G153181
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP876  :
3.04
 GRMZM2G035305
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
85 days agoIDP94  :
3.04
 GRMZM2G083111
     Variation: March 31st, 2005
Gene Model: February 23rd, 2019
88 days agoadh1 alcohol dehydrogenase1: electrophoretic mobility; null alleles are known; dimeric; intra/interlocus hybrid bands occur); SSR umc1726
1.10
    Panozzo, A et al. 2019. Frontiers Plant Sci 10:62     Reference: February 20th, 2019
Gene Product: July 8th, 2009
Variation: March 22nd, 2006
88 days agoumc1049  :
2.08
 GRMZM2G144180
     Variation: February 20th, 2019
Gene Model: February 15th, 2018
88 days agopdc3 pyruvate decarboxylase3: cDNA sequence, gene-specific probe
1.03
    Panozzo, A et al. 2019. Frontiers Plant Sci 10:62     Reference: February 20th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
88 days agophyB1 phytochromeB1: phyB1 mutants have elongated mesocotyl under red light. Double mutant with phyB2 is pale, narrow with elongated leaf blades, elongated internodes, less anthocyanin in sheath tissues, and earlier flowering time.
1.03
    Wies, G et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz015     Reference: February 20th, 2019
Gene Product: October 24th, 2007
Variation: February 1st, 2015
88 days agophyB2 phytochromeB2: phyB2 mutant is early flowering. Double mutant with phyB1 is pale, narrow with elongated leaf blades and elongated internodes, and contains less anthocyanin in sheath tissues.
9.05
    Wies, G et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz015     Reference: February 20th, 2019
Gene Product: October 24th, 2007
Variation: January 11th, 2013
88 days agoaox2 alternative oxidase2: primers give PCR product closely similar to alternative oxidase in other species
 
 GRMZM2G125669
 Panozzo, A et al. 2019. Frontiers Plant Sci 10:62     Reference: February 20th, 2019
Gene Product: February 22nd, 2012
Variation: March 1st, 2012
Gene Model: February 17th, 2012
88 days agoalt10 alanine aminotransferase10: putative alanine aminotransferase weakly expressed in seedling leaf (Tausta et al 2014)
 
 GRMZM2G124963
 Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: August 22nd, 2014
Variation: February 20th, 2019
Gene Model: August 1st, 2014
88 days agoIDP114  :
2.09
 GRMZM2G134559
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP117  : similar to SNARE-like protein of A. thaliana
2.08
 GRMZM2G097568
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP1450  :
2.08
 GRMZM5G837251
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agogbptf6 GeBP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.08
 GRMZM2G075122
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP1674  :
2.08
 GRMZM2G327635
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP171  :
2.09
 GRMZM2G444533
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP176  :
2.08
 GRMZM2G010551
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agomagi86137  :
2.09
 GRMZM2G169095
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP1944  :
2.09
 GRMZM2G340130
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP2141  :
2.06
 GRMZM2G078959
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP2589  :
2.07
 GRMZM2G102878
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP456  :
2.07
 GRMZM2G409722
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP469  :
2.08
 GRMZM2G010991
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP502  :
2.07
 GRMZM2G087662
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP504  :
2.07
 GRMZM2G031837
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP610  :
2.09
 GRMZM2G152258
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP616  :
2.07
 GRMZM2G081676
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP661  :
2.09
 GRMZM2G111172
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP785  : similar to rhomboid protein-like protein of A. thaliana
2.08
 GRMZM2G172138
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP79  :
2.07
 GRMZM2G080466
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
88 days agoIDP866  :
2.06
 GRMZM2G176977
     Variation: March 31st, 2005
Gene Model: February 20th, 2019
89 days agoras11A1 ras related protein11A1:
 
 GRMZM2G029486
     Variation: January 21st, 2011
Gene Model: February 19th, 2019
89 days agoIDP1439  :
2.04
 GRMZM2G083888
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP147  : similar to small nuclear ribonucleoprotein D2 of A. thaliana
2.04
 GRMZM2G171372
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP1496  :
2.04
 GRMZM2G391511
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP183  :
2.05
 GRMZM2G152089
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP1954  :
2.03
 GRMZM2G114276
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP1971  :
2.02
 GRMZM2G162230
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP2407  :
2.04
 GRMZM2G022255
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP2449  :
2.04
 GRMZM2G065073
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP2455  : similar to bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein of A. thaliana
2.04
 GRMZM2G136364
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agorpl12 ribosomal protein L12: endosperm cDNA 5C05D11 similar to mammalian and yeast ribosomal protein
2.04
 AC196489.3_FG002
 Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP267  : similar to elongator complex protein 1 of A. thaliana
2.04
 GRMZM2G018223
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP445  :
2.02
 GRMZM2G463280
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP496  :
2.04
 GRMZM2G022347
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP592  :
2.05
 GRMZM2G319454
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP712  : similar to copper chaperone for SOD1 to A. thaliana
2.03
 GRMZM2G175728
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP723  :
2.05
 GRMZM2G008864
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
89 days agoIDP750  :
2.05
 GRMZM2G116812
     Variation: March 31st, 2005
Gene Model: February 19th, 2019
90 days agorth2 roothair defective2: root hairs elongate 1/5-1/4 of normal; plants are vigorous and show little nutritional deficiency
5.04 - 5.09
    Klamer, F et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz011     Reference: February 18th, 2019
Variation: September 1st, 2003
90 days agoIDP232  :
2.02
 GRMZM5G876898
     Variation: March 31st, 2005
Gene Model: February 18th, 2019
90 days agoIDP2388  :
2.02
 GRMZM2G007914
     Variation: March 31st, 2005
Gene Model: February 18th, 2019
90 days agoIDP53  :
2.01
 GRMZM2G407347
     Gene Product: March 25th, 2010
Gene Model: February 18th, 2019
90 days agoIDP776  :
2.01
 GRMZM2G065012
     Variation: March 31st, 2005
Gene Model: February 18th, 2019
90 days agorad51b recombination protein51 gene b: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
3.05
 GRMZM2G084762
 Liu, F et al. 2019. Int J Mol Sci 20:807     Reference: February 18th, 2019
Gene Product: August 12th, 2016
Variation: May 13th, 2012
Gene Model: June 19th, 2014
90 days agorad51a recombination protein51 gene a: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
7.04
 GRMZM2G121543
 Liu, F et al. 2019. Int J Mol Sci 20:807     Reference: February 18th, 2019
Gene Product: August 12th, 2016
Variation: April 19th, 2012
Gene Model: June 19th, 2014
91 days agozim32 ZIM-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: February 17th, 2019
3 months agoIDP1478  :
1.11
 GRMZM2G001661
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agoIDP1633  :
1.11
 GRMZM2G004459
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agomagi24643  :
1.10
 GRMZM2G120596
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agoIDP2395  :
1.10
 GRMZM2G031870
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agoIDP2400  :
1.12
 GRMZM2G021642
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agoIDP340  :
1.09
 GRMZM2G042040
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agoIDP538  :
1.11
 GRMZM2G062289
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agoIDP603  :
1.11
 GRMZM2G024267
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agomagi62468  :
1.12
 GRMZM2G023242
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agoIDP72  :
1.11
 GRMZM5G878153
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agoIDP738  :
1.10
 GRMZM2G443453
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agoIDP772  :
1.11
 GRMZM2G477609
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agomagi7806  :
1.10
 GRMZM2G165619
     Variation: March 31st, 2005
Gene Model: February 16th, 2019
3 months agoplt5 phospholipid transfer protein homolog5:
 
 GRMZM2G005991
 Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281     Reference: January 6th, 2017
Gene Product: September 1st, 2003
Variation: February 15th, 2019
Gene Model: January 6th, 2017
3 months agoIDP2450  : similar to P-loop containing nucleoside triphosphate hydrolase-like protein of A. thaliana
1.10
 GRMZM5G837018
     Variation: March 31st, 2005
Gene Model: February 15th, 2019
3 months agoIDP352  :
1.08
 GRMZM2G015005
     Variation: March 31st, 2005
Gene Model: February 15th, 2019
3 months agoIDP437  :
1.09
 GRMZM2G038217
     Variation: May 12th, 2006
Gene Model: February 15th, 2019
3 months agoIDP630  :
1.08
 GRMZM2G092391
     Variation: February 15th, 2007
Gene Model: February 15th, 2019
3 months agorgh*-N802 roughN802: speckled kernel; floury pitted etched rough surface
3.05 - 3.09
    Neuffer, MG and England, DJ. 1995. MNL 69:43-46     Reference: September 1st, 2003
Variation: February 14th, 2019
3 months agoagal1 alpha-galactosidase1: Entrez Gene relates to alpha-galactosidase 1 (AGAL) of Arabidopsis
1.07
 GRMZM2G095126
 Beaumont, VH et al. 1996. Theor Appl Genet 93:606-612     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: February 14th, 2019
Gene Model: April 19th, 2016
3 months agoIDP1437a  : similar to protein PIR of A. thaliana (1S site)similar to small subunit ribosomal protein S19 of A. thaliana (1L site)
1.01
 GRMZM2G103599
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP1468  : similar to RNA polymerase Rpb6 of A. thaliana
1.08
 GRMZM2G013600
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP156  :
1.06
 GRMZM2G056056
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP174  :
1.07
 GRMZM5G842970
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP190  :
1.08
 GRMZM2G144782
     Variation: May 12th, 2006
Gene Model: February 14th, 2019
3 months agomagi32402  :
1.07
 GRMZM2G057608
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP1982  :
1.07
 GRMZM5G832380
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP243  :
1.07
 GRMZM2G152552
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP2492  :
1.07
 GRMZM2G135866
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP295  : similar to chitin elicitor receptor kinase 1 of A. thaliana
1.06
 GRMZM2G317770
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP512  :
1.08
 GRMZM2G124434
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP640  : similar to methionine aminopeptidase 1A of A. thaliana
1.07
 GRMZM2G113062
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP641  : similar to UDP-glucosyl transferase 85A2 of A. thaliana
1.07
 GRMZM2G373124
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP644  :
1.07
 GRMZM2G025855
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP669  :
1.08
 GRMZM2G064605
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP707  :
1.08
 GRMZM2G164018
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP716  : similar to thioredoxin family protein of A. thaliana
1.07
 GRMZM5G804772
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP790  :
1.06
 GRMZM2G068657
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP820  :
1.07
 GRMZM2G153208
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agoIDP856  :
1.07
 AC217910.3_FG004
     Variation: March 31st, 2005
Gene Model: February 14th, 2019
3 months agosro2 similar to RCD one2:
 
 GRMZM5G866843
 Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Variation: February 13th, 2019
Gene Model: August 10th, 2018
3 months agoIDP1407  :
1.05
 GRMZM2G114356
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agomagi23951  :
1.04
 GRMZM2G330650
     Variation: September 25th, 2007
Gene Model: February 13th, 2019
3 months agoIDP1473  :
1.04
 GRMZM2G074138
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP1675  :
1.05
 GRMZM2G424181
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP182  :
1.04
 GRMZM2G115975
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP194  :
1.05
 GRMZM2G034372
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP1953  :
1.04
 GRMZM2G074946
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP1986  :
1.04
 GRMZM2G028302
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP2367  :
1.05
 GRMZM5G868757
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP2553  :
1.04
 GRMZM2G107473
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP34  :
1.05
 GRMZM2G167728
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP511  :
1.04
 GRMZM5G862467
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP739  :
1.04
 GRMZM2G009232
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP741  : similar to Lactoylglutathione lyase / glyoxalase I family protein of A. thaliana
1.06
 GRMZM2G067028
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP751  :
1.05
 GRMZM2G033478
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP752  : similar to putative protein phosphatase 2C 6 of A. thaliana
1.06
 GRMZM2G170299
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP839  :
1.04
 GRMZM2G039880
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agoIDP875  :
1.03
 GRMZM5G851485
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agomagi107220  :
1.04
 GRMZM2G172244
     Variation: March 31st, 2005
Gene Model: February 13th, 2019
3 months agopdi9 protein disulfide isomerase9:
1.03
 GRMZM2G073628
 Jia, SG et al. 2019. pp.doi: 10.1016/j.gpb.2018.02.003     Reference: February 12th, 2019
Gene Product: September 1st, 2003
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
3 months agoAY106592  : similar to protein sodium-and lithium-tolerant 1 of A. thaliana
1.03
 GRMZM2G048482
     Variation: February 12th, 2019
Gene Model: February 12th, 2019
3 months agoAY110240  :
1.03
 GRMZM2G013957
     Variation: July 29th, 2004
Gene Model: February 12th, 2019
3 months agoIDP112  :
1.03
 GRMZM2G319781
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
3 months agolimtf1 LIM-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
 GRMZM2G128206
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: February 12th, 2019
3 months agoIDP180  :
1.03
 GRMZM2G341309
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
3 months agoIDP329  :
1.03
 GRMZM2G049190
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
3 months agoIDP643  : similar to gamma-interferon-inducible lysosomal thiol reductase family protein of A. thaliana
1.03
 GRMZM2G307992
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
3 months agoIDP701  :
1.03
 GRMZM2G048703
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
3 months agoIDP92  :
1.03
 GRMZM2G049041
     Variation: March 31st, 2005
Gene Model: February 12th, 2019
3 months agotrps2 trehalose-6-phosphate synthase2:
1.03
 GRMZM2G099860
 Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: September 15th, 2013
Gene Model: February 11th, 2019
3 months agolw2 lemon white2: like lw1
5.05
 GRMZM2G137409
 Zhang, LL et al. 2019. Plant Physiol pp.doi: 10.1104/pp.18.01148     Reference: February 8th, 2019
Gene Product: February 8th, 2019
Variation: February 11th, 2019
Gene Model: February 8th, 2019
3 months agooy1 oil yellow1: seedling oily greenish-yellow; viable; fails to convert protoporphyrin IX to Mg-protoporphyrin; oy1-t tinged green; oy1-1039, oy1-1040 lethal; Oy1-700 dominant yellow-green; gene product confirmed by transgenic expression and genetic mapping.
10.02
    Khangura, RS et al. 2019. G3 9:375-390     Reference: February 11th, 2019
Gene Product: June 8th, 2007
Variation: March 17th, 2011
3 months agobnlg1429  :
1.02
        Variation: February 11th, 2019
3 months agoIDP1425  :
1.02
 GRMZM2G136081
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
3 months agoIDP2385  :
1.03
 GRMZM2G012501
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
3 months agomagi2762  :
1.02
 GRMZM2G172410
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
3 months agoIDP29  :
1.02
 GRMZM2G080586
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
3 months agoIDP343  : similar to vacuolar protein-sorting-associated protein 37-1 of A. thaliana
1.02
 GRMZM2G023575
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
3 months agoIDP622  :
1.02
 GRMZM2G009326
     Variation: March 12th, 2007
Gene Model: February 11th, 2019
3 months agoIDP810  :
1.02
 GRMZM2G164965
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
3 months agoIDP847  :
1.01
 GRMZM2G038485
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
3 months agoIDP871  : similar to RAB GTPase H1E of A. thaliana
1.02
 AC166636.1_FG008
     Variation: March 31st, 2005
Gene Model: February 11th, 2019
3 months agoIDP1464  :
1.01
 GRMZM2G013634
     Variation: March 31st, 2005
Gene Model: February 10th, 2019
3 months agoIDP2420  :
1.01
 GRMZM2G176820
     Variation: March 31st, 2005
Gene Model: February 10th, 2019
3 months agoIDP553  :
1.01
 GRMZM2G176397
     Variation: March 31st, 2005
Gene Model: February 10th, 2019
3 months agoIDP658  :
1.02
 GRMZM2G070259
     Variation: May 13th, 2006
Gene Model: February 10th, 2019
3 months agoIDP755  : similar to D111/G-patch domain-containing protein of A. thaliana
1.01
 GRMZM2G089976
     Variation: March 31st, 2005
Gene Model: February 10th, 2019
3 months agopx14 peroxidase14:
2.03
 GRMZM2G108219
 Jin, B et al. 2019. PLoS One 14:e0211941     Reference: February 9th, 2019
Gene Product: September 18th, 2015
Variation: February 22nd, 2015
Gene Model: February 23rd, 2015
3 months agopza01089  : candidate modifier of Ga1-s expression (Hurst et al. 2019)
10.04
    Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: January 26th, 2019
3 months agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
    Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: June 22nd, 2005
3 months agoumc1454  : candidate modifier of Ga1-s expression (Hurst et al. 2019)
2.04
 AC235541.1_FG002
 Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: September 1st, 2003
Gene Model: February 21st, 2018
3 months agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
 GRMZM2G091819
 Bernardi, J et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.01.027     Reference: February 8th, 2019
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
3 months agosid1 sister of indeterminate spikelet1: inflorescence architecture, apparent target of tasselseed4 microRNA (Chuck et al 2008),
 
 GRMZM2G176175
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: February 27th, 2017
Variation: October 17th, 2014
Gene Model: October 16th, 2014
Recommended by Lisa Harper:
September 2nd, 2008
3 months agospi1 sparse inflorescence1: mutant tassels have fewer branches and spikelets, and its ears are small, with fewer kernels
3.08
 GRMZM2G025222
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: June 24th, 2011
Gene Model: April 24th, 2013
Recommended by Lisa Harper:
October 7th, 2008
3 months agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
 GRMZM2G700665
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: February 27th, 2017
Gene Model: November 20th, 2012
3 months agopebp1 phosphatidylethanolamine-binding protein1:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: November 17th, 2010
3 months agopebp2 phosphatidylethanolamine-binding protein2:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
3 months agopebp3 phosphatidylethanolamine-binding protein3:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
3 months agopebp7 phosphatidylethanolamine-binding protein7:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: June 19th, 2015
3 months agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
 GRMZM2G179264
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
3 months agopebp12 phosphatidylethanolamine-binding protein12:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 10th, 2010
3 months agopebp14 phosphatidylethanolamine-binding protein:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
3 months agopebp15 phosphatidylethanolamine-binding protein15:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
3 months agopebp18 phosphatidylethanolamine-binding protein18:
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 13th, 2010
3 months agopebp26 phosphatidylethanolamine-binding protein26:
 
 GRMZM2G400167
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 14th, 2010
Gene Model: July 28th, 2016
3 months agogi1 gigantea1: homologous to Arabidopsis photoperiod gene gigantea
8.03
 GRMZM2G107101
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 19th, 2012
Variation: April 23rd, 2013
Gene Model: September 18th, 2012
3 months agogi2 gigantea2: homologous to Arabidopsis photoperiod gene gigantea.
3.03
 GRMZM5G844173
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 19th, 2012
Variation: September 18th, 2012
Gene Model: September 18th, 2012
3 months agoba1 barren stalk1: ear shoots and most tassel branches and spikelets absent
3.06
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: July 19th, 2012
Variation: March 18th, 2015
3 months agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
 GRMZM2G307119
 Stephenson, E et al. 2019. PLoS One 14:e0203728   At5g18560 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os07g0669500 (Gramene) 		Reference: February 7th, 2019
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
3 months agobif1 barren inflorescence1: dominant Bif1 plants have ear and tassel with many fewer spikelets, bare rachis appendages
8.03 - 8.03
 GRMZM2G130953
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: October 16th, 2015
Variation: October 16th, 2015
Gene Model: October 16th, 2015
3 months agoct2 compact plant2: semi-dwarf plant, 1/3 height; shortened internodes; club tassel, fasciated ear
1.01 - 1.02
 GRMZM2G064732
 Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001     Reference: February 7th, 2019
Gene Product: September 16th, 2013
Variation: September 20th, 2013
Gene Model: September 16th, 2013
3 months agogl15 glossy15: glossy leaf surface expressed after 3rd leaf (aka gl4)
9.03
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: October 5th, 2012
3 months agora1 ramosa1: ear and tassel many-branched; tassel branches taper to tip
7.02
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: April 11th, 2007
Variation: August 20th, 2010
3 months agora2 ramosa2: tassel many-branched, upright, not conical like ra1; irregular kernel placement
3.03 - 3.03
 AC233943.1_FG002
 Stephenson, E et al. 2019. PLoS One 14:e0203728   AT5G63090 (TAIR)
LOC_Os01g07480 (MSU/TIGR)
Os01g0169400 (Gramene) 		Reference: February 7th, 2019
Gene Product: July 27th, 2009
Variation: September 19th, 2009
Gene Model: July 14th, 2011
3 months agotsh4 tassel sheath4: tsh4 mutant tassels have one to five long tassel branches, instead of ~13 observed in non-mutant W22. In place of tassel branches, long bract leaves were present, clustered at the base of the tassel.
7.03
 GRMZM2G307588
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: October 8th, 2011
Gene Model: October 6th, 2011
3 months agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
 GRMZM2G381691
 Stephenson, E et al. 2019. PLoS One 14:e0203728   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene) 		Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
3 months agobif4 barren inflorescence4: like Bif1; dominant plants have ear and tassel with many fewer spikelets, bare rachis appendage
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: October 16th, 2015
Variation: October 16th, 2015
3 months agohb48 Homeobox-transcription factor 48: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Tsuda, K, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00967     Reference: February 7th, 2019
Variation: April 7th, 2017
3 months agohb76 Homeobox-transcription factor 76: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Tsuda, K, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00967     Reference: February 7th, 2019
Variation: April 7th, 2017
3 months agosbp23 SBP-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
3 months agoub2 unbranched2: double mutant shows decrease in tassel branch number
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: December 17th, 2014
3 months agotcptf15 TCP-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: November 2nd, 2014
3 months agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
 GRMZM2G101511
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
3 months agofea2 fasciated ear2: ear fasciated, broadened and flattened at the tip; rows irregular; similar to CLAVATA 2 of Arabidopsis thaliana
4.05
    Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001     Reference: February 7th, 2019
Gene Product: December 20th, 2004
Variation: February 11th, 2013
3 months agozmm15 Zea mays MADS-box 15:
5.01
 GRMZM2G553379
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: June 15th, 2018
Gene Model: June 15th, 2018
3 months agozap1 zea apetala homolog1:
2.10
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: February 2nd, 2011
3 months agozmm31 Zea mays MADS31:
5.01
 GRMZM2G071620
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: August 7th, 2008
Gene Model: July 2nd, 2014
3 months agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: August 21st, 2018
Variation: February 6th, 2011
3 months agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 1st, 2003
Variation: April 15th, 2008
3 months agospt*-N1620B spottedN1620B:
4.03 - 4.05
    Neuffer, MG. 1995. Personal communication-mutant collection     Reference: September 1st, 2003
Variation: February 7th, 2019
3 months agozmm24 Zea mays MADS24:
1.10
 GRMZM2G087095
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: February 2nd, 2011
Gene Model: July 2nd, 2014
3 months agovt2 vanishing tassel2: inflorescence development; TRP-dependent auxin synthesis
 
 GRMZM2G127308
 Stephenson, E et al. 2019. PLoS One 14:e0203728   AT1G70560 (TAIR) Reference: February 7th, 2019
Gene Product: April 30th, 2011
Variation: June 24th, 2011
Gene Model: May 2nd, 2012
3 months agocrn1 coryne1: involved in shoot apical meristem (SAM) development; functions downstream of fea2; mutants develop fasciated ears
 
 GRMZM2G032132
 Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001   AT5G13290 (TAIR) Reference: February 7th, 2019
Gene Product: January 24th, 2013
Gene Model: May 21st, 2018
3 months agosbp29 SBP-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
 GRMZM2G067624
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: December 18th, 2014
Gene Model: July 11th, 2018
3 months agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
 GRMZM2G398650
 Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: June 7th, 2012
3 months agogif1 growth-regulating-factor-interacting factor1: mutants are semi-dwarf with narrow leaves and fasciated inflorescence meristems
1.10
 GRMZM2G180246
 Zhang, D, et al. 2018. Plant Cell. 0:doi: 10.1105/tpc.17.00791   AT5G28640 (TAIR)
LOC_Os03g52320 (MSU/TIGR) 		Reference: February 7th, 2019
Gene Product: July 6th, 2015
Variation: February 6th, 2018
Gene Model: July 6th, 2015
3 months agoconz1 constans1: homologous to photoperiod genes constans (co) from Arabiodopsis and heading date 1 (hd1) in rice. (Miller 2008)
9.03
    Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: July 28th, 2008
3 months agocsu904  :
7.04
 GRMZM2G102786
     Variation: September 1st, 2003
Gene Model: February 6th, 2019
3 months agoIDP1466  :
7.06
 GRMZM2G133819
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
3 months agoIDP1611  :
7.05
 GRMZM2G427937
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
3 months agoIDP1673  :
7.05
 GRMZM2G148249
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
3 months agoIDP2594  :
7.04
 GRMZM2G382106
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
3 months agoIDP705  : similar to ATP synthase mitochondrial F1 complex assembly factor 2 of A. thaliana
7.05
 GRMZM2G003172
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
3 months agoIDP744  :
7.05
 GRMZM2G130398
     Variation: March 31st, 2005
Gene Model: February 6th, 2019
3 months agocsu5a  : Was thp1, leaf cDNA csu5 reported similar to Vigna mungo sulfhydryl-endopeptidase; single copy. Not in Entrez neighbors May 1998. similar to cysteine proteinase-like protein of A. thaliana
7.04
 GRMZM2G036203
 Rixmann, C et al. 1992. in Heller, SR et al. 1992. Abstracts, Plant Genome I, San Diego, CA     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2019
3 months agoumc1333  : similar to formin-like protein 2 of A. thaliana
7.03
 GRMZM2G132486
     Variation: February 5th, 2019
Gene Model: February 5th, 2019
3 months agocdpk11 calcium dependent protein kinase11: encodes a protein that functions in abscisic acid signaling upstream of the MAP kinase encoded by mpk2, aka MPK5 (Ding et al 2012)
 
 GRMZM2G047486
 Borkiewicz, L et al. 2019. Physiol Plant pp.doi: 10.1111/ppl.12938     Reference: February 5th, 2019
Gene Product: July 9th, 2013
Variation: April 3rd, 2015
Gene Model: July 9th, 2013
3 months agoIDP1704  :
7.03
 GRMZM2G052336
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
3 months agoIDP1981  :
7.04
 GRMZM2G072054
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
3 months agoIDP2483  :
7.03
 GRMZM2G148864
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
3 months agoIDP2590  :
7.04
 GRMZM5G886969
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
3 months agoIDP789  :
7.03
 GRMZM2G071015
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
3 months agoIDP865  :
7.03
 GRMZM2G085670
     Variation: March 31st, 2005
Gene Model: February 5th, 2019
3 months agomagi99589  :
7.03
 GRMZM5G870752
     Variation: March 31st, 2005
Gene Model: February 4th, 2019
3 months agoIDP96  :
7.03
 GRMZM2G161302
     Variation: March 31st, 2005
Gene Model: February 4th, 2019
3 months agodek15 defective kernel15: collapsed floury endosperm; lethal; cultured embryos green
10.04 - 10.07
 GRMZM2G079796
 He, YH et al. 2019. Plant Cell pp.doi; 10.1105/tpc.18.00921     Reference: February 1st, 2019
Gene Product: February 1st, 2019
Variation: February 1st, 2019
Gene Model: February 1st, 2019
3 months agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Anand, A et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13089   LOC_Os1g67410 (MSU/TIGR) Reference: February 1st, 2019
Gene Product: February 27th, 2017
3 months agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Anand, A et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13089     Reference: February 1st, 2019
Gene Product: August 25th, 2017
3 months agotlk2 tousled-like protein kinase2:
5.01
    Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: February 15th, 2008
Variation: June 25th, 2015
3 months agoesp1 embryo specific protein1: late embryonic protein, induced by abscisic acid and osmotic stress; cDNA similar to other LEA proteinsortholog of wheat Em; protein and mRNA in embryo from 16 days after pollination
6.05
 AC233879.1_FG002
 Williams, BA and Tsang, A. 1991. Plant Mol Biol 16:919-923     Reference: September 1st, 2003
Gene Product: January 31st, 2019
Variation: September 1st, 2003
Gene Model: July 27th, 2016
3 months agobnlg1057  :
1.06
    Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Variation: September 1st, 2003
3 months agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
    Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Variation: October 5th, 2018
3 months agolhy1 late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010)
10.03
 GRMZM2G474769
 Tian, L et al. 2019. PLoS One 14:e0211623     Reference: January 31st, 2019
Gene Product: July 31st, 2016
Variation: December 28th, 2016
Gene Model: December 28th, 2016
3 months agomeg8 maternally expressed gene8:
 
 GRMZM2G123153
 Xiong, Y et al. 2014. BMC Plant Biology 14:204     Reference: August 29th, 2014
Variation: August 29th, 2014
Gene Model: January 31st, 2019
3 months agolhcb10 light harvesting chlorophyll a/b binding protein10: gene-specific cDNA probe; low expression in bundle sheath cells (aka cab1)unique genomic sequence; promoter is light regulated in tobacco and maize leaf mesophyll protoplasts (Knight et al. 1992)
 
 GRMZM2G351977
 Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: September 1st, 2003
Gene Model: August 3rd, 2018
3 months agolea14 late embryogenesis abundant protein14: appears to be involved in drought tolerance
 
 GRMZM2G050607
 Bui, MM et al. 2019. Agronomy 9:62     Reference: January 31st, 2019
Gene Product: January 31st, 2019
Gene Model: January 31st, 2019
3 months agorop5 Rho-related protein from plants 5:
9.01
 GRMZM2G102946
 Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: April 1st, 2004
Gene Model: January 1st, 2015
3 months agoAY109061  :
7.02
 GRMZM2G095562
     Variation: September 25th, 2007
Gene Model: January 31st, 2019
3 months agoAY108844  :
7.04
 GRMZM2G121022
     Variation: September 25th, 2007
Gene Model: January 31st, 2019
3 months agoIDP1643  :
7.02
 GRMZM2G032944
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
3 months agomagi14814  :
7.02
 GRMZM2G160770
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
3 months agoIDP353  :
7.02
 GRMZM2G054120
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
3 months agoIDP754  : similar to S-adenosylmethionine decarboxylase 1 beta chain of A. thaliana
7.02
 GRMZM2G461159
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
3 months agoIDP767  :
7.02
 GRMZM2G053927
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
3 months agoIDP84  :
7.02
 GRMZM2G022014
     Variation: March 31st, 2005
Gene Model: January 31st, 2019
3 months agocybc7 cytochrome b-c1 complex subunit 7: encodes an important part of the mitochondrial electron transport chain that can suppress HR mediated by Rp1-D21 in a transient expression assay
 
 GRMZM2G318346
 He, YJ et al. 2019. Planta pp.doi: 10.1007/s00425-019-03092-8     Reference: January 30th, 2019
Gene Product: January 30th, 2019
Variation: January 30th, 2019
Gene Model: January 30th, 2019
3 months agoIDP1417  :
7.00
 GRMZM2G019200
     Variation: March 31st, 2005
Gene Model: January 30th, 2019
3 months agoIDP1688  :
7.00
 AC205122.4_FG003
     Variation: March 31st, 2005
Gene Model: January 30th, 2019
3 months agopspb2 photosystem II oxygen evolving polypeptide2: sequence highly similar to OEC23 oxygen evolving complex protein of photosystem II; located peripheral to lumenal side of thylakoid (Huang et al 2013)
7.01
 GRMZM2G047954
 Huang, M et al. 2013. J Proteome Res 12:491-504     Reference: August 5th, 2014
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: January 30th, 2019
3 months agoIDP336  : similar to ankyrin repeat and regulator of chromosome condensation (RCC1) domain-containing protein of A. thaliana
7.01
 GRMZM2G443668
     Variation: March 31st, 2005
Gene Model: January 30th, 2019
3 months agoIDP497  :
7.01
 GRMZM2G060866
     Variation: March 31st, 2005
Gene Model: January 30th, 2019
3 months agoIDP80  :
7.01
 GRMZM2G012324
     Variation: March 31st, 2005
Gene Model: January 30th, 2019
3 months agoba2 barren stalk2: like ba1 except tassel is normal (original description from Emerson, Beadle and Fraser 1935)
2.04 - 2.05
 GRMZM2G399641
 Yao, H, et al. 2019. Molecular Plant. 0:doi: 10.1016/j.molp.2018.12.024     Reference: January 28th, 2019
Gene Product: January 26th, 2019
Variation: January 26th, 2019
Gene Model: January 26th, 2019
3 months agokwl1 kiwellin1: specifically blocks the catalytic activity of Ustilago maydis secreted fungal chorismate mutase Cmu1, by hindering substrate access to the active site
 
 GRMZM2G073114
 Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: January 22nd, 2019
Gene Model: January 21st, 2019
3 months agocmu3 chorismate mutase3:
 
 GRMZM2G028369
 Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: February 12th, 2014
Gene Model: January 21st, 2019
3 months agocmu2 chorismate mutase2: enzyme activity from protein raised in E coli
5.04
 GRMZM2G179454
 Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: February 12th, 2014
Gene Model: February 12th, 2014
3 months agoms30 male sterile30: like ms1
4.08
 GRMZM2G174782
 An, XL et al. 2019. Molecular Plant pp.doi: 10.1016/j.molp.2019.01.011     Reference: January 25th, 2019
Gene Product: January 25th, 2019
Variation: January 25th, 2019
Gene Model: January 25th, 2019
3 months agomagi104697  :
9.03
 GRMZM2G074085
     Variation: March 31st, 2005
Gene Model: January 25th, 2019
3 months agotcb1 teosinte crossing barrier1: Barrier to crossing of maize onto Central Plateau teosinte - transferred to maize with linked positive modifiers, fails to accept any pollen, including Ga1-s
4.04
    Lu, Y et al. 2019. bioRxiv preprint pp.doi; 10.1101/529032     Reference: January 24th, 2019
Variation: January 24th, 2019
3 months agopme3 pectin methylesterase3: present and expressed only in Ga1-s genotypes; mutationally inactivated version present in Ga1-m
 
    Lu, Y et al. 2019. bioRxiv preprint pp.doi; 10.1101/529032     Reference: January 24th, 2019
Gene Product: September 10th, 2018
3 months agoIDP2364  :
9.02
 GRMZM2G008326
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
3 months agoIDP2406  :
9.03
 GRMZM2G110993
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
3 months agoIDP2554  :
9.07
 GRMZM2G169384
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
3 months agoIDP534  :
9.04
 GRMZM2G124567
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
3 months agoIDP809  :
9.04
 GRMZM5G842855
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
3 months agoIDP850  :
9.07
 AC149475.2_FG002
     Variation: March 31st, 2005
Gene Model: January 24th, 2019
3 months agonagk1 N-acetylglutamate kinase1: catalyzes the second step of arginine biosynthesis
2.03
 GRMZM2G132777
 Liu, WJ et al. 2019. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01902     Reference: January 23rd, 2019
Gene Product: January 23rd, 2019
Gene Model: January 23rd, 2019
3 months agoIDP1419  :
9.07
 GRMZM2G060564
     Variation: March 31st, 2005
Gene Model: January 23rd, 2019
3 months agoumc2558  :
9.04
 GRMZM2G020468
     Variation: January 22nd, 2019
Gene Model: January 23rd, 2019
3 months agoIDP2462  :
9.06
 GRMZM2G138589
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP248  : similar to homogentisate 1,2-dioxygenase of A. thaliana
9.03
 GRMZM2G154093
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP256  :
9.03
 GRMZM2G112951
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP2570  :
9.02
 GRMZM2G100873
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP300  :
9.04
 GRMZM2G005869
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP310  :
9.04
 GRMZM2G359070
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP375  :
9.03
 GRMZM2G034015
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP65  : similar to 60S ribosomal protein L23 of A. thaliana
9.07
 GRMZM2G171181
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP665  :
9.04
 AC225193.3_FG003
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP694  : similar to B12D protein of A. thaliana
9.00
 GRMZM2G027392
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP708  :
9.04
 GRMZM2G152417
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP717  :
9.03
 GRMZM2G097995
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agoIDP756  : similar to 40S ribosomal protein S15a-5 of A. thaliana
9.04
 GRMZM2G007103
     Variation: September 25th, 2007
Gene Model: January 22nd, 2019
3 months agoIDP760  :
9.01
 GRMZM2G152177
     Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agosun3 SUN domain protein3: plant-prevalent mid-SUN 3 transmembrane (PM3) type nuclear envelope protein
 
 GRMZM2G120262
 Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Gene Model: January 21st, 2019
Recommended by Hank (Henry) Bass:
April 19th, 2011
4 months agosun1 SUN domain protein1: canonical C-terminal SUN-domain (CCSD) type nuclear envelope protein
 
 GRMZM2G109818
 Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
4 months agosun2 SUN domain protein2:
 
 GRMZM2G440614
 Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
4 months agosun4 SUN domain protein4:
 
    Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
4 months agosun5 SUN domain protein5: plant-prevalent mid-SUN 3 transmembrane (PM3) type nuclear envelope protein; may be pollen specific
 
 AC194341.4_FG003
 Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
4 months agohsp10 heat shock protein10: Sequence shows similarity to Arabidopsis HSP18.2
1.03
 GRMZM2G481529
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Variation: August 8th, 2017
Gene Model: August 8th, 2017
4 months agohex1 hexokinase1: electrophoretic mobility; null allele is known; cytosolic; monomeric
3.02 - 3.03
 GRMZM2G104081
 Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Variation: February 15th, 2010
Gene Model: September 15th, 2013
4 months agohex2 hexokinase2: electrophoretic mobility; null allele is known; cytosolic; monomeric
6.04 - 6.05
 GRMZM2G432801
 Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Variation: February 15th, 2010
Gene Model: September 15th, 2013
4 months agohex3 hexokinase3:
8.05
 GRMZM2G058745
 Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Variation: February 15th, 2010
Gene Model: September 15th, 2013
4 months agohex4 hexokinase4:
 
 GRMZM2G068913
 Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agohex5 hexokinase5:
 
 GRMZM5G856653
 Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agohex6 hexokinase6:
 
 GRMZM2G171373
 Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agohex7 hexokinase7:
 
 GRMZM2G051806
 Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agohex8 hexokinase8:
 
 GRMZM2G046686
 Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agohex9 hexokinase9:
 
 GRMZM2G467069
 Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agohsp22 heat shock protein22: mitochondrial protein
4.07
 GRMZM2G007729
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: October 18th, 2013
4 months agohsp8 heat shock protein8:
 
 GRMZM2G080724
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
4 months agohsp9 heat shock protein9:
 
 GRMZM2G046382
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
4 months agohsp11 heat shock protein11:
 
 GRMZM2G306679
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
4 months agohsp12 heat shock protein12:
 
 GRMZM2G158232
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
4 months agohsp17.2 heat shock protein17.2: seedling expressed heat shock protein; cDNA sequence similar to other plant 18 kDa heat shock proteins but distinct in maize
3.04
 GRMZM2G422240
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 3rd, 2015
4 months agoles*-A467 lesion*-A467: recessive les* plants have late, large, necrotic lesions
 
    Johal, GS; Hulbert, SH; Briggs, SP. 1995. Disease lesion mimics of maize: A model for cell death in plants. Bioessays 17:685-692     Reference: September 1st, 2003
Variation: January 14th, 2019
4 months agoznf1 zinc finger protein1: glucose starved, root tip cDNA
9.03
 GRMZM5G836222
 Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: January 14th, 2019
Gene Model: January 13th, 2019
4 months agocsu1118  :
9.07
 GRMZM5G860976
 Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 14th, 2019
4 months agocdj3 chaperone DNA J3: NCBI: putative dnaJ chaperone family protein
5.03
 GRMZM2G134980
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Variation: March 24th, 2017
Gene Model: March 24th, 2017
4 months agohsp1 heat shock protein1: genomic clones, single copy (Southern blots), transcribed (Northern blots), transgenic (petunia) expression
8.01
    Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
4 months agohsp90 heat shock protein, 90 kDa: heat-induced; encoded protein interacts with HSP101
10.04
 GRMZM5G833699
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 14th, 2019
Variation: September 1st, 2003
Gene Model: November 3rd, 2014
4 months agohsp26 heat shock protein26: was umc195; cDNA, single mRNA species induced by heat shock, in vitro HSP26 imported by isolated chloroplasts, cross-reacts with anti-pea-chloroplast-HSP21 antibodies
1.03
 GRMZM2G149647
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: January 30th, 2015
Gene Model: January 30th, 2015
4 months agocsu43  : gene specific probe, partially sequenced cDNA to leaf mRNA
9.04
 GRMZM2G152105
 Baysdorfer, C. 1993. Personal communication to MaizeDB     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 14th, 2019
4 months agocdj1 chaperone DNA J homolog1: leaf cDNA csu63, deduced amino acid sequence nearly identical to chaperone DNA J, multiple copies
1.11
 GRMZM2G134917
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: September 29th, 2012
Gene Model: July 27th, 2016
4 months agohsp18f heat shock protein18f: induction by heat shock is developmentally constitutive
3.02
    Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: July 18th, 2014
4 months agohsp70-4 heat shock protein70-4:
3.05
    Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: January 2nd, 2013
4 months agocsu193  : single copy, novel leaf cDNA sequence
9.03
 GRMZM2G019586
 Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 14th, 2019
4 months agohsp6 heat shock protein6:
 
 AC209784.3_FG007
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
4 months agohsp7 heat shock protein7:
 
 GRMZM5G802801
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
4 months agohsp5 heat shock protein5:
9.06
 GRMZM2G366532
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
4 months agoIDP1637  :
9.00
 GRMZM5G811223
     Variation: March 31st, 2005
Gene Model: January 14th, 2019
4 months agoc3h6 C3H-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.04
 GRMZM2G086614
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: January 14th, 2019
4 months agoIDP1669  : similar to Arabidopsis LRR receptor-like serine/threonine-protein kinase FEI 2
9.06
 GRMZM2G479243
     Variation: March 31st, 2005
Gene Model: January 14th, 2019
4 months agoIDP1681  : similar to protein arginine N-methyltransferase 7 of A. thaliana
9.03
 GRMZM2G037624
     Variation: March 31st, 2005
Gene Model: January 14th, 2019
4 months agoIDP1984  :
9.03
 GRMZM2G171616
     Variation: March 31st, 2005
Gene Model: January 14th, 2019
4 months agoIDP2142  : similar to alpha-1,4-galacturonosyltransferase of A. thaliana
9.06
 GRMZM2G113506
     Variation: March 31st, 2005
Gene Model: January 14th, 2019
4 months agohsp4 heat shock protein4:
7.02
 GRMZM2G069651
 Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 14th, 2019
Gene Model: January 14th, 2019
4 months agomez2 enhancer of zeste2:
9.04
 GRMZM5G875502
 Springer, N et al. 2002. Plant Physiol 128:1332-1345     Reference: January 5th, 2011
Gene Product: September 1st, 2003
Variation: January 13th, 2019
Gene Model: January 13th, 2019
4 months agoIDP1969  : similar to ferredoxin 2 of A. thaliana
9.01
 GRMZM2G013607
     Variation: March 31st, 2005
Gene Model: January 13th, 2019
4 months agoAY110782  :
9.04
 GRMZM2G431243
     Variation: September 25th, 2007
Gene Model: January 12th, 2019
4 months agoIDP111  : imilar to Arabidopsis CP12 domain-containing protein 1
9.01
 GRMZM2G480850
     Variation: March 31st, 2005
Gene Model: January 12th, 2019
4 months agoanx1 annexin1:
 
 GRMZM2G064993
 He, F et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/ery452     Reference: January 11th, 2019
Variation: October 16th, 2013
Gene Model: July 27th, 2016
4 months agobbx7 b-box7:
 
 GRMZM5G813532
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
4 months agobbx11 b-box11:
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
4 months agobbx12 b-box12:
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
4 months agobbx13 b-box13:
 
 GRMZM2G438979
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
4 months agobbx17 b-box17:
 
 GRMZM2G146614
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
4 months agobbx24 b-box24:
 
 GRMZM2G354319
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
4 months agobbx26 b-box26:
 
 GRMZM2G415711
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
4 months agobbx34 b-box34:
 
 GRMZM2G056126
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
4 months agoanx2 annexin2:
5.07
 GRMZM2G061950
 He, F et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/ery452     Reference: January 11th, 2019
Variation: October 15th, 2013
Gene Model: July 27th, 2016
4 months agobbx6 b-box6:
 
 GRMZM2G422644
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
4 months agocol10 C2C2-CO-like-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
4 months agocol13 C2C2-CO-like-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
4 months agocol14 C2C2-CO-like-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
4 months agocol2 C2C2-CO-like-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
4 months agocol3 C2C2-CO-like-transcription factor 3: Functions as a repressor of flowering
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
4 months agocol4 C2C2-CO-like-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
4 months agocol5 C2C2-CO-like-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
4 months agocol6 C2C2-CO-like-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
4 months agocol7 C2C2-CO-like-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
4 months agocol8 C2C2-CO-like-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
4 months agocol16 C2C2-CO-like-transcription factor 16:
1.06
 GRMZM2G159996
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Variation: December 7th, 2016
Gene Model: December 7th, 2016
4 months agoprf5 Profilin homolog5: Deduced amino acid sequence shares 95% identity with PRF4 (aka ZmPRO4) and 79-80% identity with other maize profilins PRF1, PRF2 and PRF3.
9.02
 GRMZM5G877388
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: September 1st, 2003
Variation: July 14th, 2008
Gene Model: January 15th, 2015
4 months agocol12 2C2-CO-like-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: zinc finger protein CONSTANS-LIKE 16
5.07
 GRMZM2G041991
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: September 1st, 2003
Variation: March 31st, 2017
Gene Model: March 31st, 2017
4 months agocol11 C2C2-CO-like-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
2.04
 GRMZM2G095598
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Variation: October 9th, 2018
Gene Model: June 18th, 2018
4 months agodbb2 double B-box zinc finger protein2:
 
 GRMZM2G131982
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
4 months agodbb3 double B-box zinc finger protein3: similar to Arabidopsis light-regulated zinc finger protein 1
 
 GRMZM5G834596
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
4 months agodbb5 double B-box zinc finger protein5:
 
 GRMZM2G118884
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
4 months agodbb7 double B-box zinc finger protein7:
 
 GRMZM2G110541
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
4 months agodbb8 double B-box zinc finger protein8:
 
 GRMZM2G070446
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
4 months agodbb9 double B-box zinc finger protein9:
 
 GRMZM2G116475
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
4 months agodbb10 double B-box zinc finger protein10:
 
 GRMZM2G143718
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
4 months agodbb11 double B-box zinc finger protein11:
 
 GRMZM2G028594
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
4 months agodbb12 double B-box zinc finger protein12:
 
 GRMZM2G098442
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
4 months agocol17 C2C2-CO-like-transcription factor 17:
 
 GRMZM2G176173
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
4 months agocol19 C2C2-CO-like-transcription factor 19:
 
 GRMZM2G092363
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
4 months agocol15 C2C2-CO-like-transcription factor 1:
1.04
 GRMZM2G134671
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
4 months agodbb4 double B-box zinc finger protein4:
4.05
 GRMZM2G019335
 Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
4 months agofae2 fatty acid elongase2:
9.03
    Schreiber, L et al. 2000. Biochem Soc Trans 28:647-649     Reference: May 29th, 2010
Variation: January 9th, 2019
4 months agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
    Boehlein, SK et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01849     Reference: January 9th, 2019
Gene Product: November 4th, 2014
Variation: December 4th, 2018
4 months agogl3 glossy3: like gl1, but surface wax has all rice-grain-type particles
4.08
 GRMZM2G162434
 Rallapalli, G et al. 2019. BMC Bioinformatics 20:9     Reference: January 9th, 2019
Gene Product: June 2nd, 2012
Variation: June 2nd, 2012
Gene Model: June 2nd, 2012
4 months agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
    Boehlein, SK et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01849     Reference: January 9th, 2019
Gene Product: November 4th, 2014
Variation: January 9th, 2019
4 months agophp20075b(ext)  : similar to Arabidopsis putative gibberellin-regulated protein
9.03
 GRMZM2G105364
 Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: January 9th, 2019
4 months agoglpdh1 glycerol-3-phosphate dehydrogenase1: NAD+-dependent type A
 
 GRMZM2G155348
 Zhao, Y et al. 2019. BMC Plant Biology 19:16     Reference: January 9th, 2019
Gene Product: July 12th, 2018
Gene Model: July 11th, 2018
4 months agomac1 multiple archesporial cells1: (was lar*-487) several archesporial cells undergo normal meiosis; plants partially female sterile but completely male sterileBeware: this locus could accidentally be confused with the act1 (actin 1) locus, which also was called MAc1 in past publications!
10.03
 GRMZM2G027522
 van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: August 2nd, 2012
Variation: August 10th, 2012
Gene Model: July 26th, 2012
Recommended by Chung-Ju Rachel Wang:
December 19th, 2013
4 months agoms*-6015  :
 
    van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: August 8th, 2014
4 months agoam1 ameiotic1: male and female sterility - anaphase I equatorial; alleles am1-pra1(was pra1), am1-2 (was am2)affects switch to meiotic cell cycle
5.02
    van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: August 11th, 2011
4 months agoms13 male sterile13: like ms5; affected at microspore vacuolation
5.00 - 5.01
    van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: May 27th, 2004
4 months agoms22 male sterile22: pollen mother cells degenerate
7.02
 GRMZM2G442791
 van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: August 12th, 2012
Variation: February 12th, 2013
Gene Model: August 11th, 2012
4 months agoms23 male sterile23: pollen mother cells degenerate
8.01 - 8.02
 GRMZM2G021276
 van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 14th, 2016
Variation: December 4th, 2016
Gene Model: December 4th, 2016
4 months agoms9 male sterile9: breakdown of pollen mother cellsLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
 GRMZM2G308034
 van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 1st, 2003
Variation: July 18th, 2015
Gene Model: July 18th, 2015
4 months agoes4 embryo sac4: one of 4-5 copy gene family; pre-zygotic, embryo sac specific; required for pollen tube growth arrest and burst
 
 GRMZM2G009359
 Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
4 months agoes1 embryo sac1: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
 GRMZM2G012012
 Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
4 months agoes2 embryo sac2: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
 GRMZM2G009359
 Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
4 months agoes3 embryo sac3: one of 4-5 copy gene family; pre-zygotic embyro sac specific; required for pollen tube growth arrest and burst
 
 GRMZM2G009359
 Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
4 months agoms32 male sterile32: like ms1
2.00 - 2.10
 GRMZM2G163233
 van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 2nd, 2013
Variation: December 4th, 2016
Gene Model: September 2nd, 2013
4 months agoocl4 outer cell layer4:
1.05 - 1.06
    van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 1st, 2003
Variation: February 23rd, 2013
4 months agosut1 sucrose transporter1: mutant plants are deficient in leaf sucrose unloading to pholem; mature leaves hyperaccumulate carbohydrates and display leaf chlorosis with premature senescence
1.02
 GRMZM2G034302
 Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435     Reference: January 8th, 2019
Gene Product: September 14th, 2013
Variation: April 16th, 2013
Gene Model: April 16th, 2013
4 months agosweet4c sugars will eventually be exported transporter4c: Mutants are defective in seed filling
5.04
 GRMZM2G137954
 Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435   LOC_Os02g19820 (MSU/TIGR) Reference: January 8th, 2019
Gene Product: November 4th, 2015
Variation: November 3rd, 2015
Gene Model: November 3rd, 2015
4 months agosweet4b sugars will eventually be exported transporter4b:
5.04
 GRMZM2G144581
 Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435     Reference: January 8th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agopmei3 pectin methylesterase inhibitor3:
6.05
    Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Variation: September 25th, 2007
4 months agosweet11a sugars will eventually be exported transporter11:
1.06
 GRMZM2G368827
 Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435     Reference: January 8th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agotcl1 tapetal cell layer1: Mutant fails to form coherent middle and tapetal layers, and there are extra cells between the endothecial and inner sporogenous (AR) cells.
 
    van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: February 12th, 2013
4 months agosweet4a sugars will eventually be exported transporter4a:
 
 GRMZM2G000812
 Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435     Reference: January 8th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agomsp1 multiple sporocyte1: A conserved ligand-receptor pair with mac1
 
 GRMZM2G447447
 van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR) 		Reference: January 8th, 2019
Gene Product: February 17th, 2018
Gene Model: February 17th, 2018
4 months agopmei2 pectin methylesterase inhibitor2:
 
 GRMZM2G122230
 Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
4 months agopmei4 pectin methylesterase inhibitor4:
 
 GRMZM2G457612
 Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
4 months agopmei5 pectin methylesterase inhibitor5:
 
 GRMZM5G888934
 Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
4 months agopmei6 pectin methylesterase inhibitor6:
 
 GRMZM2G343236
 Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
4 months agopmei1 pectin methylesterase inhibitor1:
6.07
 GRMZM2G079661
 Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
4 months agortl3 reversion-to-ethylene sensitivity1 like3: Over-expression reduces ethylene responses (Shi et al. 2016)
 
 GRMZM2G121208
 Zheng, LJ et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-018-1524-4     Reference: January 4th, 2019
Variation: June 10th, 2016
Gene Model: June 10th, 2016
4 months agoexpb14 beta expansin14: may be involved in seed expansion during kernel development
 
 GRMZM2G118873
 Zheng, LJ et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-018-1524-4     Reference: January 4th, 2019
Gene Product: April 24th, 2008
Gene Model: January 4th, 2019
4 months agoexpb15 beta expansin15: may be involved in seed expansion during kernel development
 
 GRMZM2G121308
 Zheng, LJ et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-018-1524-4     Reference: January 4th, 2019
Gene Product: April 24th, 2008
Gene Model: January 4th, 2019
4 months agoaasr2 abscisic acid stress ripening2:
2.05
 GRMZM5G854138
 Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: December 1st, 2011
Variation: November 22nd, 2011
Gene Model: November 1st, 2011
4 months agoaasr6 abscisic acid stress ripening6:
5.04
 GRMZM2G057841
 Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Variation: November 12th, 2014
Gene Model: November 1st, 2011
4 months agoaasr9 abscisic acid stress ripening9:
3.04
 GRMZM2G383699
 Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: November 1st, 2011
4 months agobss1 bundle sheath strands specific1: encodes a photosynthesis-related protein with a deduced amino acid sequence with high homology to tomato Asr1 in the C-terminal region; stress-inducilible;
8.06
 GRMZM2G168552
 Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: December 1st, 2011
Variation: November 1st, 2011
Gene Model: November 1st, 2011
4 months agoaasr5 abscisic acid stress ripening5:
10.04
 GRMZM2G052100
 Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: November 4th, 2011
Variation: April 14th, 2007
Gene Model: November 1st, 2011
4 months agoaasr7 abscisic acid stress ripening7:
 
 GRMZM2G014797
 Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: November 1st, 2011
4 months agoaasr8 abscisic acid stress ripening8:
 
 GRMZM2G314075
 Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: November 1st, 2011
4 months agoaasr10 abscisic acid stress ripening10:
 
 GRMZM2G009792
 Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: January 2nd, 2019
4 months agoakin2 AKINbetagamma-1 protein kinase2:
1.03
    Wang, J et al. 2018. Gene doi: 10.1016/j.gene.2018.     Reference: December 31st, 2018
Gene Product: December 31st, 2018
Variation: September 25th, 2007
4 months agosnrk1a2 SNF1-related kinase alpha1-like2:
 
 GRMZM2G180704
 Wang, J et al. 2018. Gene doi: 10.1016/j.gene.2018.     Reference: December 31st, 2018
Gene Product: December 31st, 2018
Gene Model: February 13th, 2014
4 months agosnrk1a1 SNF1-related kinase alpha1-like1:
6.06
 GRMZM2G077278
 Wang, J et al. 2018. Gene doi: 10.1016/j.gene.2018.     Reference: December 31st, 2018
Gene Product: December 31st, 2018
Gene Model: February 7th, 2018
4 months agoabp1 auxin binding protein1: putative auxin receptor, single band in Southerns, endoplasmic reticulum and plasma membrane locales (aka axr1, aux311)Dominant Scmv1 and Scmv2 confer resistance
3.05 - 3.05
    Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
4 months agopin12 PIN-formed protein12: similar to Arabidopsis PIN10 (Forestan et al 2012)
9.02
 GRMZM2G160496
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
4 months agopin9 PIN-formed protein9: similar to Arabidopsis PIN9 (Forestan et al 2012)
3.06
 GRMZM5G859099
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
4 months agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
 GRMZM2G315375
 Yue, R et al. 2015. PLoS One 10:e0118751     Reference: December 28th, 2018
Gene Product: May 1st, 2012
Variation: June 22nd, 2018
Gene Model: April 28th, 2012
4 months agoaic1 auxin import carrier1: cDNA encoding a protein with a deduced amino acid showing 73% identity to AtAUX1.
1.05
 GRMZM2G129413
 Yue, R et al. 2015. PLoS One 10:e0118751   AT2G21050 (TAIR) Reference: December 28th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 21st, 2015
4 months agobif2 barren inflorescence2: recessive few-branched tassel, normally no pollen shed; variable expression on ear with 0-2 spikelets produced at each floral node
1.05
    Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012   AT2G34650 (TAIR) Reference: December 28th, 2018
Gene Product: July 19th, 2012
Variation: October 23rd, 2013
4 months agotar1 tryptophan aminotransferase related1:
6.05
 GRMZM2G127160
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 30th, 2011
Gene Model: June 4th, 2012
4 months agoabp4 auxin binding protein homolog4: putative auxin receptor, genomic clone, promoter-reporter gene fusion functional in maize leaf protoplasts. cDNA ZmERabp4 probes one band on Southerns
10.03
    Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: September 1st, 2003
Variation: May 26th, 2005
4 months agoaic3 auxin import carrier3: part of gene family that maintains auxin distribution pattern against environmental or developmental influences
1.03
 GRMZM2G149481
 Yue, R et al. 2015. PLoS One 10:e0118751     Reference: December 28th, 2018
Gene Product: April 19th, 2017
Gene Model: April 19th, 2017
4 months agorum1 rootless with undetectable meristems1: primordia for seminal roots and for laterals on the primary root absent
 
 GRMZM2G037368
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: June 16th, 2014
Variation: June 16th, 2014
Gene Model: June 16th, 2014
4 months agopin5 PIN-formed protein5: similar to Arabiodopsis PIN5 (Forestan et al 2012)
 
 GRMZM2G025742
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
4 months agopin7 PIN-formed protein7: simlar to Arabiodopsis PIN5 (Forestan et al 2012)
 
 GRMZM2G148648
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
4 months agopin11 PIN-formed protein11: similar to Arabiodopsis PIN5 (Forestan et al 2012)
 
 GRMZM2G040911
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
4 months agopin10 PIN-formed protein10: similar to Arabidopsis PIN10 (Forestan et al 2012)
 
 GRMZM2G126260
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
4 months agopin4 PIN-formed protein4: auxin efflux carriter similar to Arabidopsis PIN1 (Forestan et al 2012), but from PIN clade not found in all flowering plants save for the Brassicacease (O'Connor 2014 et al
4.08
 GRMZM2G171702
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
4 months agoatl1 auxin transporter-like1: mutant tassels have reduced branch numbers; bald tip on ears with fewer spikelets per row, and agravitropic root growth
 
 GRMZM2G127949
 Yue, R et al. 2015. PLoS One 10:e0118751   AT2G38120 (TAIR)
LOC_Os01g63770 (MSU/TIGR) 		Reference: December 28th, 2018
Gene Product: April 19th, 2017
Variation: April 19th, 2017
Gene Model: March 12th, 2015
4 months agoaic2 auxin import carrier2:
 
 GRMZM2G045057
 Yue, R et al. 2015. PLoS One 10:e0118751   AT2G21050 (TAIR) Reference: December 28th, 2018
Gene Product: September 1st, 2003
Variation: August 1st, 2017
Gene Model: August 1st, 2017
4 months agoyuc7 yucca7:
 
 GRMZM2G480386
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
4 months agotar2 tryptophan aminotransferase related2:
 
 GRMZM2G066345
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 30th, 2011
Gene Model: August 19th, 2017
4 months agoaic4 auxin import carrier4: part of gene family that maintains auxin distribution pattern against environmental or developmental influences
 
 GRMZM2G067022
 Yue, R et al. 2015. PLoS One 10:e0118751     Reference: December 28th, 2018
Gene Product: April 19th, 2017
Gene Model: December 28th, 2018
4 months agotir1 transport inhibitor response1: encodes a member of a class of F-BOX proteins shown to bind auxin and facilitate degradation of the transcriptional repressor Aux/IAA proteins
 
 GRMZM2G135978
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012   LOC_Os05g05800 (MSU/TIGR)
Os05g0150500 (Gramene) 		Reference: December 28th, 2018
Gene Product: July 25th, 2017
Gene Model: December 28th, 2018
4 months agopin2 PIN-formed protein2: see pin1
5.06
 GRMZM2G074267
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Variation: June 11th, 2007
Gene Model: June 7th, 2012
4 months agopin8 PIN-formed protein8: similar to Arabidopsis PIN8 (Forestan et al 2012)
3.07
 GRMZM5G839411
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
4 months agotar3 tryptophan aminotransferase related3:
6.05
 GRMZM2G141810
 Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 30th, 2011
Gene Model: August 22nd, 2013
4 months agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
    Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: August 25th, 2017
Variation: June 29th, 2005
4 months agolgn1 liguleless narrow1: Mutant leaves are narrow and branching in the inflorescence is reduced.
 
 GRMZM2G134382
 Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: January 24th, 2013
Variation: January 15th, 2016
Gene Model: January 3rd, 2013
4 months agohsf1 hairy sheath frayed1: dominant Hsf1 plants have pubescent sheaths and leaf margins; liguled enations at leaf margins
5.06 - 5.07
    Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Variation: September 1st, 2003
4 months agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
    Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: December 18th, 2014
Variation: November 8th, 2007
4 months agolg3 liguleless3: dominant Lg3 plants lack ligule; leaves upright, broad, often concave and pleated; homeobox similar to knox5 and knox11
3.04
    Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: August 22nd, 2014
Variation: March 16th, 2015
4 months agolg4 liguleless4: dominant Lg4 plants lack ligule and auricle but show vestiges sporadically in bladeclass I homeobox; cDNA and genomic clones; sequence and expression similar to lg3 and knox5
8.05
 GRMZM2G094241
 Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: August 22nd, 2014
Variation: May 18th, 2012
Gene Model: May 24th, 2012
4 months agotru1 tassels replace upper ears1: upper ear branches tassel-like, tillers bear ears
3.04 - 3.10
 GRMZM2G039867
 Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: December 17th, 2013
Variation: December 18th, 2013
Gene Model: December 17th, 2013
4 months agowab1 Wavy auricles in blades1: dominant confers auricle tissue in blade portion of leafrecessive mutants showed extremely acute tassel branch angles accompanied by a significant reduction in the size of the pulvinus compared with normal plants
2.06 - 2.07
 GRMZM2G110242
 Richardson, AE; Hake, S. 2018. Plants 8: 4   LOC_Os09g24480 (MSU/TIGR)
Os09g0410500 (Gramene) 		Reference: December 25th, 2018
Gene Product: September 14th, 2016
Variation: November 2nd, 2014
Gene Model: November 2nd, 2014
4 months agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
    Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: August 25th, 2017
Variation: February 20th, 2015
4 months agogn1 gnarley1: dominant Gn1 characterized by reduced internodal length, sinuously curving culm, lack of distinct boundary between blade and sheath, extra silks
2.10
    Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: September 1st, 2003
Variation: May 30th, 2014
4 months agobrd1 brassinosteroid-deficient dwarf1: Mutant plants have essentially no internode elongation and exhibit no etiolation response when germinated in the dark.
 
 GRMZM2G103773
 Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Gene Product: February 18th, 2012
Variation: March 5th, 2012
Gene Model: February 15th, 2012
4 months agobri1a brassinosteroid insensitive1a: Encodes a brassinosteroid receptor
 
 GRMZM2G048294
 Richardson, AE; Hake, S. 2018. Plants 8: 4   AT4G39400 (TAIR)
LOC_Os01g52050 (MSU/TIGR) 		Reference: December 25th, 2018
Variation: July 17th, 2015
Gene Model: July 16th, 2015
4 months agobri1b brassinosteroid insensitive1b: Encodes a brassinosteroid receptor
 
 GRMZM2G449830
 Richardson, AE; Hake, S. 2018. Plants 8: 4     Reference: December 25th, 2018
Variation: July 17th, 2015
Gene Model: July 16th, 2015
4 months agosep1 selenoprotein1: NCBI: selenoprotein family proteincontributes to tolerance of both osmotic and salinity stress
3.05 - 3.06
 GRMZM2G109429
 Zhu, JT et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13507     Reference: December 24th, 2018
Gene Product: December 24th, 2018
Variation: December 24th, 2018
Gene Model: March 3rd, 2017
4 months agouggt1 UDP-glucose:glycoprotein glucosyltransferase1: protein product interacts with sep1 product;
 
 GRMZM2G370162
 Zhu, JT et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13507     Reference: December 24th, 2018
Gene Product: December 24th, 2018
Gene Model: December 24th, 2018
4 months agocyc13 cyclin13:
4.07
 GRMZM2G075117
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Variation: March 15th, 2017
Gene Model: March 15th, 2017
4 months agocki1 cyclin-dependent kinase inhibitor1:
1.08
 GRMZM2G116885
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Variation: December 6th, 2016
Gene Model: December 6th, 2016
4 months agocyc14 cyclin14: NCBI: cyclin-D4-2-like
1.07
 GRMZM2G133413
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Variation: January 19th, 2017
Gene Model: January 19th, 2017
4 months agocdc2 cell division control protein homolog2: cDNA sequence homologous to cdc2/cdc28 subfamily of serine/threonine protein kinases, complements yeast cdc28
1.01
 GRMZM2G008327
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: December 29th, 2016
Variation: April 23rd, 2010
Gene Model: March 30th, 2015
4 months agocdc3 cell division control protein homolog3:
3.10
 GRMZM2G495626
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: December 29th, 2016
Gene Model: December 21st, 2018
4 months agocki6 cyclin-dependent kinase inhibitor6:
4.07
 GRMZM2G084570
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
4 months agocyc10 cyclin10: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity.
 
 GRMZM2G107377
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Variation: December 21st, 2016
Gene Model: December 21st, 2016
4 months agocyc11 cyclin11: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity.
 
 GRMZM2G161382
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Gene Model: December 21st, 2016
4 months agocki2 cyclin-dependent kinase inhibitor2:
 
 GRMZM2G037926
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Variation: May 17th, 2017
Gene Model: March 7th, 2017
4 months agocki3 cyclin-dependent kinase inhibitor3:
 
 GRMZM2G157510
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Variation: May 4th, 2017
Gene Model: March 7th, 2017
4 months agocki4 cyclin-dependent kinase inhibitor4:
 
 GRMZM2G358931
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Variation: May 26th, 2017
Gene Model: March 7th, 2017
4 months agocki7 cyclin-dependent kinase inhibitor7:
 
 GRMZM2G343769
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
4 months agocki8 cyclin-dependent kinase inhibitor8:
 
 GRMZM2G154414
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
4 months agocyc15 cyclin15:
 
 GRMZM2G006721
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Gene Model: December 21st, 2018
4 months agocyc16 cyclin16:
 
 GRMZM2G007130
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: June 26th, 2009
Gene Model: December 21st, 2018
4 months agocki5 cyclin-dependent kinase inhibitor5:
5.07
 GRMZM2G101613
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
4 months agocdc1 cell division control protein homolog1:
4.10
 GRMZM2G174596
 Garza-Aguilar, SM et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.12.020     Reference: December 22nd, 2018
Gene Product: December 29th, 2016
Gene Model: December 21st, 2018
4 months agoppr27 pentatricopeptide repeat protein27:
 
 GRMZM2G353195
 Chen, L et al. 2018. BMC Plant Biology 18:366     Reference: December 21st, 2018
Gene Product: December 27th, 2016
Gene Model: December 21st, 2018
4 months agoppr360 pentatricopeptide repeat protein360:
 
 GRMZM2G141202
 Chen, L et al. 2018. BMC Plant Biology 18:366     Reference: December 21st, 2018
Gene Product: December 27th, 2016
Gene Model: December 21st, 2018
5 months agomyb40 myb transcription factor40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
 GRMZM2G051256
 Meng, C; Sui, N. 2018. Plant Physiol Biochem 135:167-173     Reference: December 17th, 2018
Variation: February 18th, 2011
Gene Model: July 28th, 2016
5 months agobhlh10 bHLH-transcription factor 10: mutants affect root-hair length
 
    Wang, C-X et al. 2018. Plant J pp.doi: 10.1111/tpj.14200     Reference: December 17th, 2018
Gene Product: September 14th, 2016
Variation: December 17th, 2018
5 months agolrl3 ljrhl1-like3:
5.08
 GRMZM5G832135
 Hey, S et al. 2017. J Exp Bot pp.doi: 10.1093/jxb/erx104   AT5G58010 (TAIR) Reference: April 12th, 2017
Gene Product: September 14th, 2016
Gene Model: December 17th, 2018
5 months agoagpsl1 ADP glucose pyrophosphorylase small subunit leaf1: leaf-specific
1.07
 GRMZM2G163437
 Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: September 1st, 2003
Variation: April 3rd, 2011
Gene Model: June 15th, 2012
5 months agosps1 sucrose phosphate synthase1: cDNA encodes a 1068 amino acid leaf protein; transgenic (E. coli) directs sucrose phosphate synthesis
8.06
    Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: September 1st, 2003
Variation: January 15th, 2015
5 months agosus1 sucrose synthase1: (was sus2, css1) sucrose synthase-1 (SUS1) of embryo and other tissues, compare sh1; SSRs phi016, 032, 042
9.04
 GRMZM2G152908
 Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: October 25th, 2006
Variation: October 27th, 2014
Gene Model: August 12th, 2014
5 months agohak1 potassium high-affinity transporter1:
2.04
 GRMZM2G093826
 Qin, Y-J et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12756     Reference: December 15th, 2018
Gene Product: December 15th, 2018
Gene Model: February 23rd, 2018
5 months agoagpll1 ADP glucose pyrophosphorylase large subunit leaf1AGPL4:
1.10
 GRMZM2G391936
 Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: January 3rd, 2014
Variation: September 22nd, 2017
Gene Model: September 22nd, 2017
5 months agotpt1 triose phosphate translocator1: cDNA sequence similar to plant triosephospate/phosphate translocators
 
    Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
5 months agosweet13b sugars will eventually be exported transporter13b:
 
 GRMZM2G021706
 Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: November 3rd, 2015
5 months agosweet13c sugars will eventually be exported transporter13c:
 
 GRMZM2G179349
 Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: November 3rd, 2015
5 months agocbl1 calcineurin B-like1:
 
 GRMZM2G107575
 Qin, Y-J et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12756     Reference: December 15th, 2018
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
5 months agocbl9 calcineurin B-like9:
 
 GRMZM2G015324
 Qin, Y-J et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12756     Reference: December 15th, 2018
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
5 months agohak5 potassium high-affinity transporter5: mutants exhibit reduced K uptake and inhibited seedling growth
 
 GRMZM2G084779
 Qin, Y-J et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12756     Reference: December 15th, 2018
Gene Product: December 15th, 2018
Variation: December 15th, 2018
Gene Model: December 15th, 2018
5 months agomex1 maltose excess protein1:
 
 GRMZM2G156356
 Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: December 15th, 2018
Gene Model: December 15th, 2018
5 months agobmy3 beta-amylase3:
 
 GRMZM2G347708
 Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: September 1st, 2003
Gene Model: December 15th, 2018
5 months agocipk23 calcineurin B-like-interacting protein kinase3:
7.01
 GRMZM2G013236
 Qin, Y-J et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12756     Reference: December 15th, 2018
Gene Product: August 25th, 2018
Gene Model: December 15th, 2018
5 months agosweet13a sugars will eventually be exported transporter13a:
10.03
 GRMZM2G173669
 Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: December 28th, 2017
5 months agoss1 starch synthase I: single copy endosperm specific cDNA; encoded-protein cross-reacts with antibody to granule associated starch synthase I
9.02
    Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: October 14th, 2016
Variation: October 7th, 2010
5 months agosus2 sucrose synthase2: Encodes sucrose synthase-2 (SUS2), one of 3 loci defined for this function; compare sh1 and sus1.
1.04
 GRMZM2G318780
 Ning, P et al. 2018. Agronomy 8:302     Reference: December 15th, 2018
Gene Product: October 25th, 2006
Variation: September 25th, 2014
Gene Model: August 3rd, 2013
5 months agoumc1159  : candidate gene for kernel size (Peng et al., 2018)
7.01
 GRMZM2G144726
 Pang, JL et al. 2018. Plant J pp.doi: 10.1111/tpj.14193     Reference: December 14th, 2018
Variation: September 1st, 2003
Gene Model: September 4th, 2018
5 months agobhlh175 bHLH-transcription factor 175: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Pang, JL et al. 2018. Plant J pp.doi: 10.1111/tpj.14193   AT3G26744 (TAIR) Reference: December 14th, 2018
Gene Product: September 14th, 2016
5 months agopzb01111  :
10.04
        Variation: December 13th, 2018
5 months agoumc1045  : NCBI: probable serine/threonine-protein kinase PIX13
10.05
 GRMZM2G142832
 Matz, EC et al. 1992. MNL 66:107     Reference: September 1st, 2003
Variation: December 13th, 2018
Gene Model: April 25th, 2017
5 months agoarpg1 acid phosphatase-regulating gene1: 082 mutant confers a P-efficient ability to plant. Overexpression of the gene significantly increased acid phosphatase activity and Pi concentration in maize leaves.
 
 GRMZM2G041022
 Yu, TT et al. 2018. Theor Appl Genet pp.doI: 10.1007/s00122-018-3257-5     Reference: December 10th, 2018
Variation: December 10th, 2018
Gene Model: December 10th, 2018
5 months agocptk1 chloroplast thymidine kinase1: Mutants have aberrant chloroplast DNA metabolism. Alice Barkan, 2011
 
 GRMZM2G048821
 Le Ret, M et al. 2018. Plant Physiol 178:1643-1656     Reference: December 8th, 2018
Variation: October 11th, 2018
Gene Model: September 6th, 2011
5 months agoemp12 empty pericarp12: mutant severely arrests embryo and endosperm development, causing embryo lethality
 
 GRMZM2G023071
 Sun, F et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery432     Reference: December 8th, 2018
Gene Product: December 27th, 2016
Variation: December 8th, 2018
Gene Model: December 8th, 2018
5 months agolrs1 liguleless related sequence1: bzip90 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.07
 AC232238.2_FG004
 Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024     Reference: December 7th, 2018
Gene Product: August 21st, 2018
Variation: August 22nd, 2014
Gene Model: August 22nd, 2014
Recommended by Ed Coe:
January 8th, 2008
5 months agoos1 opaque-endosperm, small germ1: opaque crown; kernel larger, lighter color; viable; reduced oil content
2.00 - 2.04
    Song, WB et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12755     Reference: December 7th, 2018
Gene Product: June 15th, 2018
Variation: December 6th, 2018
5 months agomrp1 Myb related protein1: transforms aleurone cells into endosperm transfer cells and required to maintain transfer cell phenotype
8.05
    Song, WB et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12755     Reference: December 7th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
5 months agopmk1 Phosphomevalonate kinase1:
1.03
 GRMZM2G019260
 Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024     Reference: December 7th, 2018
Variation: March 9th, 2016
Gene Model: September 20th, 2016
5 months agobrs1 brassinosteroid synthesis1:
1.03
 GRMZM2G065635
 Dzievit, MJ et al. 2018. Plant Genome pp.doi: 10.3835/plantgenome2018.05.0024   AT3G50660 (TAIR) Reference: December 7th, 2018
Gene Product: September 20th, 2010
Variation: November 7th, 2013
Gene Model: October 3rd, 2012
5 months agogshs2 glutathione synthetase2:
3.05
 GRMZM2G155974
 Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: December 2nd, 2018
Variation: September 25th, 2007
Gene Model: December 1st, 2018
5 months agogshs1 glutathione synthetase1:
 
 GRMZM2G360494
 Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: December 2nd, 2018
Gene Model: December 1st, 2018
5 months agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
 GRMZM2G005624
 Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007     Reference: December 1st, 2018
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
5 months agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
    Dong, ZB et al. 2018. Trends Genet pp.doi: 10.1016/j.tig.2018.10.007     Reference: December 1st, 2018
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
5 months agosfp1 sulfate permease1:
1.02
 GRMZM2G159632
 Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: April 20th, 2018
Gene Model: February 3rd, 2015
5 months agoso1 sulfite oxidase1:
1.06
 GRMZM2G114739
 Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: April 16th, 2013
Gene Model: April 16th, 2013
5 months agosfp4 sulfate transporter4:
 
 GRMZM2G154211
 Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
5 months agocys3 cysteine synthase3:
 
 GRMZM2G003289
 Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
5 months agosqd1 sulfolipid biosynthesis1:
 
 GRMZM2G053322
 Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: December 1st, 2018
Gene Model: December 1st, 2018
5 months agocys4 cysteine synthase4:
 
 GRMZM2G003289
     Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
5 months agocys5 cysteine synthase5:
 
 GRMZM2G443985
     Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
5 months agocys7 cysteine synthase7:
 
 GRMZM2G104237
     Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
5 months agocys6 cysteine synthase6:
9.02
 GRMZM2G104269
     Gene Product: September 1st, 2003
Gene Model: December 1st, 2018
5 months agosir1 sulfite reductase1:
 
 GRMZM2G090338
 Xia, ZL et al. 2018. Frontiers Plant Sci 9:1680     Reference: December 1st, 2018
Gene Product: September 1st, 2003
Variation: January 26th, 2011
Gene Model: July 28th, 2016
5 months agobx4 benzoxazinone synthesis4: endoplasmic reticulum P450 monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; NAM SNP PHM1184
4.01
 GRMZM2G172491
 Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
5 months agopbf1 prolamin-box binding factor1: endosperm cDNA, SSR umc1065
2.06
    Jin, X et al. 2018. New Phytol pp.doi: 10.1111/nph.15614     Reference: November 30th, 2018
Gene Product: September 1st, 2003
Variation: April 20th, 2005
5 months agobx5 benzoxazinone synthesis5: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1276.
4.01
 GRMZM2G063756
 Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
5 months agohyd3 hydroxylase3: beta-carotene hydroxylase
 
 GRMZM2G152135
 Jin, X et al. 2018. New Phytol pp.doi: 10.1111/nph.15614     Reference: November 30th, 2018
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
5 months agocyp13 cytochrome P450 13: encodes CYP97A
 
 GRMZM5G837869
 Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: April 8th, 2013
Variation: July 8th, 2017
Gene Model: April 8th, 2013
5 months agocyp12 cytochrome P450 12:
2.06
 GRMZM2G091588
 Huang, HL et al. 2018. Science of The Total Environment doi: 10.1016/j.scitotenv.2018.11.351     Reference: November 30th, 2018
Gene Product: September 26th, 2016
Variation: January 22nd, 2010
Gene Model: April 30th, 2013
5 months agoatp10 ATP synthase10: specifically lacks the plastid ATP synthase; mutants block translation of atpB (cp)and atpA (cp)
 
    Zoschke, R et al. 2013. Plant Cell 25:2265-2275     Reference: February 17th, 2015
Variation: November 29th, 2018
5 months agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
    Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: April 21st, 2016
Variation: June 6th, 2016
5 months agohggt1 homogentisate geranylgeranyl transferase1: vitamin E synthesis; contributes to variation in levels of tocotrienol (Lipka et al 2013)member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
 GRMZM2G173358
 Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: January 8th, 2018
Gene Model: June 26th, 2013
5 months agosxd1 sucrose export defective1: vitamin E synthesis; anthocyanin accumulates in a non-clonal pattern at tip and margins of leaves soon after emergence from whorl; reduced plant height
5.04
    Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: December 1st, 2012
Variation: August 7th, 2012
5 months agopap19 purple acid phosphatase19: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.03
 GRMZM2G152447
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap20 purple acid phosphatase20: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.03
 GRMZM2G152477
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap22 purple acid phosphatase22: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.08
 GRMZM2G174549
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap31 purple acid phosphatase31: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
2.07
 GRMZM5G868679
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agoelm2 elongated mesocotyl2: mutant like elm1; encodes heme oxygenase
 
 GRMZM2G101004
 Zhang, H et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01520     Reference: November 23rd, 2018
Gene Product: September 24th, 2014
Variation: September 24th, 2014
Gene Model: November 18th, 2013
5 months agopap4 purple acid phosphatase4: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 AC202435.3_FG003
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap5 purple acid phosphatase5: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 AC207043.3_FG004
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap6 purple acid phosphatase6: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G007754
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap7 purple acid phosphatase7: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G073860
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap8 purple acid phosphatase8: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G077466
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap9 purple acid phosphatase9: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G096363
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap10 purple acid phosphatase10: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G104676
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap11 purple acid phosphatase11: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G106600
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap12 purple acid phosphatase12: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G109071
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap14 purple acid phosphatase14: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G111425
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap16 purple acid phosphatase16: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G138698
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap17 purple acid phosphatase17: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G138756
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap18 purple acid phosphatase18: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G141584
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap21 purple acid phosphatase21: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G157027
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap24 purple acid phosphatase24: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G326625
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap26 purple acid phosphatase26: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G366607
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap27 purple acid phosphatase27: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G386998
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap29 purple acid phosphatase29: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G434170
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap30 purple acid phosphatase30: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM5G831009
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agopap32 purple acid phosphatase32: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM5G881649
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agovte4 vitamin E synthesis4:
5.06
 GRMZM2G035213
 Baseggio, M et al. 2018. Plant Genome pp.doi:10.3835/plantgenome2018.06.0038     Reference: November 23rd, 2018
Gene Product: June 26th, 2013
Gene Model: June 26th, 2013
5 months agopap13 purple acid phosphatase13: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
7.03
 GRMZM2G109405
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 23rd, 2018
5 months agoacp1 acid phosphatase1: electrophoretic mobility; cytosolic; dimericencodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
9.03
 AC211394.4_FG004
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2016
5 months agopap25 purple acid phosphatase25: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
    Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
5 months agopap28 purple acid phosphatase28: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
    Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
5 months agoumc2224  :
1.01
 GRMZM2G076062
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Variation: February 1st, 2017
Gene Model: February 1st, 2017
5 months agopap15 purple acid phosphatase15: similar to Arabidopsis purple acid phosphatase 27encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
1.06
 GRMZM2G136453
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: June 21st, 2017
5 months agopht1 phosphate transporter protein1:
5.03
 GRMZM2G326707
 Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
5 months agopht2 phosphate transporter protein2:
1.08
 GRMZM2G154090
 Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
5 months agomecs2 methyl erythritol cyclodiphosphate synthase2:
 
 AC209374.4_FG002
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
5 months agopht9 phosphate transporter protein9:
 
 GRMZM2G070087
 Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
5 months agonc1 Na+ content1: loss-of-function allele confers increased accumulation of Na+ in leaves, and salt hypersensitivity.
 
 GRMZM2G047616
 Li, PC et al. 2018. Planta pp.doi: 10.1007/s00425-018-3043-2     Reference: November 21st, 2018
Gene Product: November 15th, 2017
Variation: November 15th, 2017
Gene Model: November 15th, 2017
5 months agopap1 purple acid phosphatase1: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G093101
 Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
5 months agopap23 purple acid phosphatase23: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G315848
 Gonzalez Munoz, E et al. 2015. Frontiers Plant Sci 6:341     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
5 months agospx1 SPX domain-containing membrane protein1: involved in Pi transport from roots to shoots
 
 GRMZM2G166976
 Sun, YL et al. 2018. Proteome Science 16:19     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
5 months agopap2 purple acid phosphatase2: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G134054
 Dionisio, G et al. 2011. Plant Physiol 156:1087-110     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
5 months agopap3 purple acid phosphatase3: encodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
 
 GRMZM2G014193
 Dionisio, G et al. 2011. Plant Physiol 156:1087-110     Reference: November 21st, 2018
Gene Product: November 21st, 2018
Gene Model: November 21st, 2018
6 months agoad1 adherent1: seedling leaves, tassel branches, and occasionally top leaves adhere
1.08
    Kempton, JH. 1921. USDA Bull 925:1-28     Reference: September 1st, 2003
Variation: November 20th, 2018
6 months agosh6 shrunken pale green6: shrunken, opaque, normal size kernel, like sh1; pale green virescent seedling that greens slowly and is usually lethal
7.00 - 7.02
    Neuffer, MG. 1992. MNL 66:39     Reference: September 1st, 2003
Variation: November 19th, 2018
6 months agoeps1 enolpyruvylshikimate phosphate synthase1: unpubl sequence
9.07
 GRMZM5G877500
 Dong, YX et al. 2018. J Biol Chem pp.doi: 10.1074/jbc.RA118.006134     Reference: November 15th, 2018
Gene Product: September 1st, 2003
Variation: November 15th, 2018
Gene Model: July 27th, 2016
6 months agodek19 defective kernel19: collapsed opaque endosperm; lethal; cultured embryos green
6.01 - 6.08
 GRMZM2G111984
 Dong, JQ et al. 2018. Plant J pp.doi: 10.1111/tpj.14153     Reference: November 13th, 2018
Gene Product: December 27th, 2016
Variation: November 13th, 2018
Gene Model: November 13th, 2018
6 months agodek33 defective kernel33: opaque, floury, dented, wrinkled kernel with floury endosperm; occasionally viviparous
5.04 - 5.05
 GRMZM2G090068
 Dong, JQ et al. 2018. Plant J pp.doi: 10.1111/tpj.14153     Reference: November 13th, 2018
Gene Product: November 13th, 2018
Variation: November 13th, 2018
Gene Model: November 13th, 2018
6 months agomet2 DNA methyl transferase2:
10.06
 GRMZM2G025592
 Stoddard, CI et al. 2018. Mol Cell pp.doi: 10.1016/j.molcel.2018.10.006     Reference: November 13th, 2018
Gene Product: April 6th, 2018
Variation: November 13th, 2018
Gene Model: November 16th, 2011
6 months agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
 GRMZM2G101958
 Jones, T et al. 2018. Methods in Molecular Biology 1864:81-93     Reference: November 12th, 2018
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 12th, 2015
6 months agoein2 ethylene insensitive 2: elevated expression co-segregated with a decreased smilaside A : smiglaside C ratio, which is important for maize seedling root defense against Fusarium graminearum
3.01
 GRMZM2G068217
 Zhou, S et al. 2018. New Phytol pp.doi: 10.1111/nph.15520   AT5G03280 (TAIR) Reference: November 12th, 2018
Variation: November 12th, 2018
Gene Model: March 1st, 2015
6 months agod8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
 GRMZM2G144744
 Schaefer, RJ et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00299     Reference: November 10th, 2018
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
6 months agod9 dwarf plant9: dominant D9 plants semidwarf with broad, dark green leaves; andromonoecious, not responsive to gibberellins; possible duplicate locus of d8
5.01
    Schaefer, RJ et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00299     Reference: November 10th, 2018
Gene Product: February 12th, 2007
Variation: January 30th, 2014
6 months agoppp1 pyrophosphate-energized proton pump1: endosperm and leaf cDNA's 5C02E08 (uaz280),csu220; single copy; similar to plant vacuolar pyrophosphate-energized ATPase
5.07
    Schaefer, RJ et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00299     Reference: November 10th, 2018
Gene Product: September 1st, 2003
Variation: December 14th, 2014
6 months agochr113 chromatin complex subunit A:
9.02
 GRMZM2G409865
     Variation: September 1st, 2003
Gene Model: November 10th, 2018
6 months agochr119 chromatin complex subunit A 119: phd31 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.07
 GRMZM2G181158
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: November 10th, 2018
6 months agochr118 chromatin complex subunit A:
6.07
 GRMZM2G168096
     Variation: September 1st, 2003
Gene Model: November 10th, 2018
6 months agochr125a chromatin complex subunit A 125a:
9.04
 GRMZM2G007922
     Variation: September 1st, 2003
Gene Model: November 10th, 2018
6 months agochr125b chromatin complex subunit A:
1.04
 GRMZM2G469162
     Variation: September 1st, 2003
Gene Model: November 10th, 2018
6 months agochr126a chromatin complex subunit A 126a:
8.03
 AC235535.1_FG001
     Variation: September 1st, 2003
Gene Model: November 10th, 2018
6 months agochr126b chromatin complex subunit A 126b:
3.04
 GRMZM2G010085
     Variation: September 1st, 2003
Gene Model: November 10th, 2018
6 months agocpps3 copalyl diphosphate synthase3: Functions as a (+)-CPP synthase
 
 GRMZM2G068808
 Murphy, KM et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01542     Reference: November 10th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
6 months agocpps4 copalyl diphosphate synthase4: Produces 8,13-CPP and LPP; moderately inducible expression under root exposure to abiotic stress
 
 AC218998.2_FG011
 Murphy, KM et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01542     Reference: November 10th, 2018
Gene Product: August 16th, 2012
Gene Model: November 9th, 2018
6 months agochr109a chromatin complex subunit A: alf6 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.03
 GRMZM2G115424
 Zhou, W et al. 2016. Genes Genom pp.DOI: 10.1007/s13258-016-0491-6     Reference: November 16th, 2016
Variation: September 1st, 2003
Gene Model: November 9th, 2018
6 months agochr12 chromatin complex subunit A 12:
2.08
 GRMZM2G102625
 Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Variation: September 1st, 2003
Gene Model: November 9th, 2018
6 months agoaat1 anthocyanin acyltransferase1: mutants exhibit reduced anthocyanin acylation
 
 GRMZM2G387394
 Paulsmeyer, MN et al. 2018. G3 8:3669-3678     Reference: November 7th, 2018
Gene Product: September 28th, 2018
Variation: October 1st, 2018
Gene Model: September 28th, 2018
6 months agochr101 chromatin complex subunit A 101: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
2.10
    Long, J-C et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12733     Reference: November 4th, 2018
Variation: June 9th, 2018
6 months agochr106 chromatin complex subunit A 106: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
1.10
 GRMZM2G071025
 Long, J-C et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12733     Reference: November 4th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
6 months agocoi1 coronatine insensitive1: jasmonate signal receptor gene family member
3.06
 GRMZM2G125411
 An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
6 months agocoi2 coronatine insensitive2: jasmonate signal receptor gene family member
 
 GRMZM2G151536
 An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
6 months agocoi3 coronatine insensitive3: jasmonate signal receptor gene family member
 
 GRMZM2G353209
 An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
6 months agocoi4 coronatine insensitive4: does not transgenically restore male fertility and defense response in Arabidopsis mutant coi1-1
 
 GRMZM2G079112
 An, LK et al. 2018. J Plant Growth Reg pp.doi: 10.1007/s00344-018-9863-2     Reference: November 2nd, 2018
Gene Product: November 2nd, 2018
Gene Model: November 2nd, 2018
6 months agogl4 glossy4: (was gl16) like gl1, but surface wax has reduced number of star-type particles
4.06
 GRMZM2G003501
 Liu, S et al. 2009. Genetics 183:1215-1225     Reference: November 1st, 2018
Gene Product: November 1st, 2018
Variation: November 1st, 2018
Gene Model: October 31st, 2018
6 months agogl4b 3-ketoacyl-CoA synthase gl4b: predicted to encode a 480-amino-acid protein; exhibits 96% identity with gl4a
 
 GRMZM2G478140
 Liu, S et al. 2009. Genetics 183:1215-1225     Reference: November 1st, 2018
Gene Product: November 1st, 2018
Gene Model: November 1st, 2018
6 months agogl14 glossy14: like gl1; expressed late (gl24 allelic)
2.05 - 2.05
 GRMZM5G806387
 Zheng, J et al. 2018. Plant J pp.doi: 10.1111/tpj.14140     Reference: October 31st, 2018
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: October 31st, 2018
6 months agocer8 eceriferum8: mutant seedlings displayed a typical glossy phenotype
10.03
 GRMZM2G101875
 Zheng, J et al. 2018. Plant J pp.doi: 10.1111/tpj.14140   AT2G47240 (TAIR) Reference: October 31st, 2018
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: January 23rd, 2018
6 months agoarftf9 ARF-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
    Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: September 25th, 2007
6 months agoarftf25 ARF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.06
 GRMZM2G116557
 Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: August 22nd, 2017
Gene Model: August 22nd, 2017
6 months agoarftf18 ARF-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
 GRMZM2G035405
 Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: September 1st, 2003
Gene Model: June 23rd, 2018
6 months agoarftf23 ARF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Galli, M et al. 2018. Nature communications 9:4526     Reference: October 30th, 2018
Variation: July 7th, 2017
6 months agonc2 Na+ content2:
 
 GRMZM2G135674
 Jiang, ZL et al. 2018. Frontiers Plant Sci 9:1485     Reference: October 30th, 2018
Gene Product: November 15th, 2017
Gene Model: November 15th, 2017
6 months agoauxrp1 auxin-regulated protein1: involved in stalk-rot disease resistance; encodes an auxin-regulated protein with a single DUF966 domain
 
 GRMZM2G063298
 Ye, JR et al. 2018. Molecular Plant pp.doi: 10.1016/j.molp.2018.10.005     Reference: October 30th, 2018
Variation: October 30th, 2018
Gene Model: October 30th, 2018
6 months agocg1 corngrass1: semidominant Cg1 plants have narrow leaves, extreme tilleringCg1 encodes two tandem miR156 genes that are overexpressed in the meristem and lateral organs. George Chuck, 2007
3.02
 GRMZM2G022489
 Ligaba-Osena, A et al. 2018. Int J Genomics doi; 10.1155/2018/8581258     Reference: October 26th, 2018
Gene Product: June 17th, 2016
Variation: August 25th, 2011
Gene Model: April 5th, 2013
Recommended by George Chuck:
September 25th, 2007
6 months agobnlg1677  :
10.07
 GRMZM5G898792
     Variation: September 1st, 2003
Gene Model: October 24th, 2018
6 months agoufg75b  :
10.07
 GRMZM2G120136
     Variation: October 24th, 2018
Gene Model: October 24th, 2018
6 months agolc1 red leaf color1: dominant Lc1 confers anthocyanin in coleoptile, nodes, auricle, leaf blade, etc. (compare Sn1 and Hopi1); displaced r1 gene
10.06
 GRMZM5G822829
 Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 23rd, 2018
6 months agoumc1477  :
10.04 - 10.06
 GRMZM2G016477
     Variation: September 1st, 2003
Gene Model: October 23rd, 2018
6 months agolug3 leunig-related3:
1.12
 GRMZM2G036169
 Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
6 months agolug5 leunig-related5:
3.04
    Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Variation: September 25th, 2007
6 months agoans2 anthranilate synthase component II homolog2:
 
 GRMZM2G171383
     Variation: October 23rd, 2018
Gene Model: October 22nd, 2013
6 months agolug1 leunig-related1:
 
 GRMZM2G361398
 Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
6 months agolug4 leunig-related4:
 
 GRMZM2G097640
 Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
6 months agolug6 leunig-related6:
 
 GRMZM2G149708
 Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
6 months agolug7 leunig-related7:
 
 GRMZM2G111247
 Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
6 months agolug8 leunig-related8:
 
 GRMZM2G061186
 Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
6 months agoans3 anthranilate synthase component II homolog2: anthranilate synthase homolog
 
 GRMZM2G049892
     Gene Product: October 23rd, 2013
Gene Model: October 23rd, 2018
6 months agolug2 leunig-related2:
5.08
 GRMZM2G079013
 Li, HY et al. 2016. J Plant Biol 59:603-615     Reference: December 12th, 2016
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
6 months agobnlg1074  :
10.04
 GRMZM5G828581
     Variation: September 1st, 2003
Gene Model: October 22nd, 2018
6 months agonpi445a  : Previous results indicated this probe mapped to chromosome 5 near the centromere.
10.03
 GRMZM2G304010
 Shattuck-Eidens, DM et al. 1990. Genetics 126:207-217     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 22nd, 2018
6 months agoemp5 empty pericarp5: encodes a mitochondrion-targeted DYW subgroup pentatricopeptide repeat (PPR) protein; mutant has empty pericarp phenotype
 
 GRMZM2G060536
 Zheng, P et al. 2018. Plant Growth Regulation pp.doi:10.1007/s10725-018-0447-8     Reference: October 22nd, 2018
Gene Product: December 27th, 2016
Variation: March 12th, 2013
Gene Model: March 11th, 2013
7 months agoumc1345  :
10.03
 GRMZM2G073077
     Variation: September 1st, 2003
Gene Model: October 21st, 2018
7 months agohb17 Homeobox-transcription factor 17: similar to Arbidopsis homeobox-leucine zipper protein MERISTEM L1Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.03
 GRMZM2G118063
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 21st, 2018
7 months agoctb1 chitinase B1: cDNA sequence corresponds to protein sequence of maize chitinase B
10.04
 GRMZM2G005633
 Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 21st, 2018
7 months agobnl3.04  :
10.00
 GRMZM2G427014
 Hong, K et al. 1993. Mol Gen Genet 239:115-121     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 21st, 2018
7 months agonlp9 NLP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04
 GRMZM2G105004
 Wang, ZK et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12696     Reference: January 25th, 2018
Variation: July 29th, 2004
Gene Model: October 21st, 2018
7 months agod1 dwarf plant1: andromonoecious, short, compact plants; responds to gibberellins; d1-t intermediate in height
3.03
 GRMZM2G036340
 Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 25th, 2014
Variation: October 30th, 2014
Gene Model: October 2nd, 2012
7 months agola1 lazy plant1: prostrate growth habit
4.03 - 4.04
 GRMZM2G135019
 Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 9th, 2013
Variation: February 26th, 2015
Gene Model: October 8th, 2013
7 months agomyb21 MYB-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: July 25th, 2017
7 months agotps3 terpene synthase3:
 
 GRMZM2G064406
 Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
7 months agoggps3 geranylgeranyl pyrophosphate synthase3: part of multigene family encoding geranylgeranyl diphosphate synthase
 
 GRMZM2G058404
 Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
7 months agod11 dwarf11: dominant mutant that appears to inhibit GA biosynthesis.
 
    Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Variation: June 18th, 2013
7 months agoks2 kaurene synthase2:
 
 GRMZM2G093526
 Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
7 months agoga20ox5 gibberellin 20-oxidase5:
 
 GRMZM2G049418
 Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 28th, 2014
Variation: July 6th, 2017
Gene Model: October 29th, 2014
7 months agoga2ox4 gibberellin 2-oxidase4:
 
 GRMZM2G153359
 Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
7 months agoga2ox7 gibberellin 2-oxidase7:
 
 GRMZM2G427618
 Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
7 months agoga2ox8 gibberellin 2-oxidase8:
 
 GRMZM2G155686
 Wang, YJ et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0788-8     Reference: October 20th, 2018
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
7 months agoscro1 scarecrow1: mRNA expressed in endodermis and quiescent center of root, influencing radial pattern
4.08
 GRMZM2G131516
 Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: August 26th, 2015
Variation: November 12th, 2012
Gene Model: November 11th, 2012
Recommended by Ed Coe:
January 25th, 2007
7 months agoisr1 inhibitor of striate1: (a.k.a. Ej1), dominant Isr1 plants have reduced expression of sr2 and other leaf-striping factors
10.06
    Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: September 1st, 2003
7 months agotan1 tangled1: (was py1) leaves short, pointed, fine white streaks; displays abnormally oriented cell divisions and altered growth and development throughout the plant
6.05
    Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: June 29th, 2005
7 months agors1 rough sheath1: shoot meristem and developing stem specific; dominant Rs1 plants have extreme ligule disorganization (aka kn2)
7.00
 GRMZM2G028041
 Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: September 30th, 2015
Variation: November 18th, 2013
Gene Model: September 30th, 2015
7 months agors2 rough sheath2: short, zigzag plants with warty, distorted sheaths and leaves
1.05
    Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: September 1st, 2003
Variation: May 9th, 2009
7 months agosr2 striate leaves2: white stripes on blade and sheath of upper leaves
10.07
    Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: September 1st, 2003
7 months agogras58 GRAS-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Kranz anatomy; SHR/SCR signaling
 
    Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: August 26th, 2015
Variation: April 9th, 2014
7 months agorgd2 ragged seedling2: mutant expression is variable from reduced midrib/moderately narrow leaf to filamentous or even radial leaves
1.04
 GRMZM5G852170
 Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: August 12th, 2016
Variation: July 6th, 2010
Gene Model: August 17th, 2017
7 months agocsld1 cellulose synthase-like D1: participates in cell wall polysaccharides formation during cell division; mutants have narrow leaves
 
 GRMZM2G015886
 Li, W et al. 2018. BMC Plant Biology 18:239     Reference: October 18th, 2018
Gene Product: October 7th, 2016
Variation: October 18th, 2018
Gene Model: October 18th, 2018
7 months agopve1 puncate vascular expression1: PVE1 may function downstream of RGD2 in a pathway that intersects and interacts with the ta-siARF pathway (Zhang et al 2012)
5.03
 AC211276.4_FG008
 Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Variation: June 16th, 2012
Gene Model: June 15th, 2012
7 months agozar8 Zea mays ARGOS8: Over-expression can lead to improved drought tolerance
 
 GRMZM2G354338
 Shi, JR et al. 2018. Plant J pp.doi: 10.1111/tpj.14131     Reference: October 17th, 2018
Gene Product: August 3rd, 2015
Gene Model: August 1st, 2015
7 months agoxyl1 xylanase1: Encodes an endoxylanase synthesized by a tapetum mRNA; predominant protein on the surface of maize pollen
 
 GRMZM2G170839
 Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: October 17th, 2018
Gene Model: October 15th, 2018
7 months agobnlg1129  :
9.08
 GRMZM2G168760
     Variation: September 1st, 2003
Gene Model: October 15th, 2018
7 months agoxyl2 xylanase2: encoded by one or few genes.
9.06
 GRMZM5G850567
 Suen, D; Huang, A. 2007. J Biol Chem 282:625-636     Reference: March 4th, 2009
Gene Product: September 1st, 2003
Gene Model: October 15th, 2018
7 months agoras18B1 ras related protein11B1:
 
 AC149818.2_FG001
     Variation: January 25th, 2011
Gene Model: October 15th, 2018
7 months agoabi43 ABI3-VP1-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.07
 GRMZM2G028794
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 14th, 2018
7 months agoumc1060  : similar to Arabidopsis RHO guanyl-nucleotide exchange factor 11
5.04
 GRMZM2G346133
     Variation: September 1st, 2003
Gene Model: October 14th, 2018
7 months agoglk34 G2-like-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.03
 GRMZM2G081671
 Xu, YJ et al. 2018. Plant Cell Rep pp.doi: 10.1007/s00299-018-2262-0     Reference: February 2nd, 2018
Variation: September 1st, 2003
Gene Model: October 13th, 2018
7 months agooec2 oxygen evolving complex2:
2.03
 GRMZM2G021617
 Ettinger, WF; Theg, SM. 1992. Plant Physiol 99:791-793     Reference: July 18th, 2012
Variation: February 6th, 2015
Gene Model: October 13th, 2018
7 months agoras11D1 ras-related protein11D1: similar to Arabidopsis RAB GTPase homolog A1D
9.03
 GRMZM2G018619
 Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: October 13th, 2018
Gene Model: October 13th, 2018
7 months agobnl5.04  :
9.03
 GRMZM2G306915
 Armstrong, CL et al. 1992. Theor Appl Genet 84:755-762     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 13th, 2018
7 months agodhn2 dehydrin2: polymorphic protein in embryos of some inbredssimilar to Arabidopsis dehydrin Rab18
9.03
 GRMZM2G098750
 Asghar, R; Fenton, RD; DeMason, DA; Close, TJ. 1994. Protoplasma 177:87-94     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: October 12th, 2018
7 months agohsk1 high-sulfur keratin homolog1: endosperm cDNA 5C04B04 (uaz144), similar to high-sulfur keratin; relation to uaz144a (bin 4.06) and uaz144b (bin 5.06) unclear
9.03
 GRMZM5G844723
 Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 12th, 2018
7 months agobnlg2122  :
9.01
 GRMZM2G124276
     Variation: October 11th, 2018
Gene Model: October 11th, 2018
7 months agonut1 necrotic upper tips1: Ac-tagged mutation, necrotic upper leaf tips and blasted tassel.
 
 GRMZM2G041668
 Dong, Zhaobin; et al. 2016. Maize Genetics Conference Abstracts. 58:P191   AT1G12260 (TAIR)
LOC_Os06g01480 (MSU/TIGR) 		Reference: June 22nd, 2016
Gene Product: September 22nd, 2015
Variation: October 10th, 2018
Gene Model: November 15th, 2017
7 months agohnh1 HNH endonuclease domain-containing protein1: involved in degrading linear and circular DNA and participates in mitochondrial DNA regulation during pollen development
 
 GRMZM2G074804
 Ma, F et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.18.00754   AT1G18680 (TAIR) Reference: October 10th, 2018
Gene Product: October 10th, 2018
Gene Model: October 10th, 2018
7 months agostk1 serine threonine kinase1: mutants have reduced pollen transmission
9.02
    Fan, MX et al. 2018. Plant Biotechnol J pp.doi: 10.1111/pbi.12880     Reference: January 13th, 2018
Gene Product: May 13th, 2014
Variation: October 10th, 2018
7 months agofl3 floury3: endosperm opaque, soft; dosage effect
8.03
 GRMZM2G006585
 Wang, JC et al. 2018. BMC Plant Biology pp.doi; 10.1186/s12870-018-1443-x     Reference: October 6th, 2018
Gene Product: September 7th, 2017
Variation: September 7th, 2017
Gene Model: September 7th, 2017
7 months agoplatz5 PLATZ-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
 GRMZM2G131280
 Wang, JC et al. 2018. BMC Plant Biology pp.doi; 10.1186/s12870-018-1443-x     Reference: October 6th, 2018
Variation: February 16th, 2018
Gene Model: February 16th, 2018
7 months agowrky111 WRKY-transcription factor 111: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Wang, C-T et al. 2018. Int J Mol Sci 19:3046     Reference: October 6th, 2018
Gene Product: July 24th, 2017
Variation: July 24th, 2017
7 months agofbr1 few-branched1: dominant Fbr1 plants have tassel reduced to 0-3 branches; bract replaces next-to-bottom branch
 
    Dari, S et al. 2018. Maydica 63     Reference: October 5th, 2018
Variation: September 1st, 2003
7 months agowrky70 WRKY-transcription factor 70: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
 GRMZM2G024898
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 2nd, 2018
7 months agoraf1 Rubisco Assembly Factor 1: Rubisco Accumulation Factor1; promotes Rubisco assembly. (A. Barkan, 2015)Encodes a previously unstudied protein that is conserved in the green lineage and localizes to bundle sheath chloroplasts
 
 GRMZM2G457621
 Salesse-Smith, CE et al. 2018. Nature Plants 4:802-810     Reference: October 2nd, 2018
Gene Product: October 4th, 2014
Variation: October 4th, 2014
Gene Model: October 4th, 2014
7 months agomrpa5 multidrug resistance-associated protein5:
 
 GRMZM2G084181
 Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Variation: May 14th, 2011
Gene Model: October 2nd, 2018
7 months agoraf2 rubisco accumulation factor2: Rubisco Accumulation Factor2; promotes Rubisco assembly. (A. Barkan, 2015)mutant is seedling-lethal, Rubisco-deficient
 
 GRMZM2G139123
 Salesse-Smith, CE et al. 2018. Nature Plants 4:802-810     Reference: October 2nd, 2018
Gene Product: December 16th, 2015
Variation: October 4th, 2014
Gene Model: October 4th, 2014
7 months agonactf82 NAC-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
    Zhu, YH et al. 2018. Mol Breed 38:125     Reference: September 30th, 2018
Gene Product: September 22nd, 2015
Variation: September 30th, 2018
7 months agoms39 male sterile39: mutant is male sterile and also exhibits a shorter plant height and tassel length and decreased tassel branch number
 
 GRMZM5G804976
 Zhu, YH et al. 2018. Mol Breed 38:125     Reference: September 30th, 2018
Gene Product: September 5th, 2012
Variation: September 29th, 2018
Gene Model: September 28th, 2018
7 months agonkd2 naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
10.06
 GRMZM5G884137
 Zhan, JP et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00392     Reference: September 28th, 2018
Gene Product: January 3rd, 2015
Variation: December 21st, 2017
Gene Model: December 21st, 2017
7 months agonkd1 naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
 
 GRMZM2G129261
 Zhan, JP et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00392     Reference: September 28th, 2018
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
7 months agodba2 DNA binding activity2: cDNA pAS12 has binding activity; gene specific
 
 GRMZM2G070360
 Davis, G et al. 1996. Maize Genetics Conference Abstracts 38     Reference: September 1st, 2003
Variation: September 25th, 2018
Gene Model: September 25th, 2018
7 months agosk1 silkless ears1: pistils abort, no silks
2.03 - 2.04
 GRMZM2G021786
 Zhao, Y et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01227   AT3G22250 (TAIR)
LOC_Os04g44354 (MSU/TIGR) 		Reference: August 21st, 2018
Gene Product: September 24th, 2018
Variation: August 21st, 2018
Gene Model: October 31st, 2016
7 months agosm1 salmon silks1: silks salmon color with P1-rr and P1-wr, brown with P1-ww
6.05 - 6.05
 GRMZM2G031311
 Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
7 months agophp20793  :
8.08
 GRMZM2G166441
 Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 24th, 2018
Gene Model: September 2nd, 2018
7 months agowrky22 WRKY-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.09
 GRMZM2G111354
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 24th, 2018
7 months agoglk101 G2-like-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
 GRMZM2G064197
 Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 1st, 2003
Gene Model: September 6th, 2018
7 months agocadtfr8 CCAAT-DR1-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.07
 GRMZM5G866699
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 24th, 2018
7 months agoumc1005  :
8.08
 GRMZM2G091121
     Variation: September 1st, 2003
Gene Model: September 24th, 2018
7 months agosm2 salmon silk2: like sm1; silks salmon color with P1-rr and P1-wr, brown with P1-ww
2.07
 GRMZM2G180283
 Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
7 months agoumc1268  :
8.07
 GRMZM2G112912
     Variation: September 1st, 2003
Gene Model: September 24th, 2018
7 months agoohp1 opaque2 heterodimerizing protein1: o2 heterodimerizing protein; one of two loci
1.11
    Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 1st, 2003
Variation: February 2nd, 2015
7 months agogrp1 glycine-rich protein1: protein with high glycine content and repetitive glycine stretches; putative cell wall components
1.08
    Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 1st, 2003
Variation: June 5th, 2014
7 months agoubf9 ubiquitin fusion protein9: genomic sequence, hybridizing mRNA expressed during cell division and/or cell growth; multiple copies in genome
 
 GRMZM2G431821
 Chen, K and Rubenstein, I. 1991. Gene 107:205-212     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 24th, 2018
7 months agoumc1607  :
8.07
 GRMZM2G033330
     Variation: September 1st, 2003
Gene Model: September 24th, 2018
7 months agotcptf29  : Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.09
 GRMZM2G148022
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: November 2nd, 2014
Gene Model: September 24th, 2018
7 months agoumc1663  :
8.09
 GRMZM2G160444
     Variation: September 1st, 2003
Gene Model: September 24th, 2018
7 months agoumc1673  :
8.08
 GRMZM2G139374
     Variation: September 1st, 2003
Gene Model: September 24th, 2018
7 months agomybr51 MYB-related-transcription factor 51:
5.09
 GRMZM5G811428
 Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 1st, 2003
Gene Model: February 2nd, 2018
7 months agosbe3 starch branching enzyme3:
8.06
 GRMZM2G005298
 Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: June 6th, 2011
Variation: June 1st, 2011
Gene Model: September 23rd, 2018
7 months agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
    Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 17th, 2010
Variation: September 16th, 2010
7 months agoAY110053  : similar to Arabidopsis protein kinase family protein
8.08
 GRMZM2G139223
     Variation: July 29th, 2004
Gene Model: September 24th, 2018
7 months agoremo2 remorin2:
1.01
 GRMZM2G137352
 Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 24th, 2018
Gene Model: September 24th, 2018
7 months agofnsi1 flavone synthase typeI1: Encodes a flavone synthase that is of the soluble Fe2+/2- oxoglutarate-dependent dioxygenase class
 
 GRMZM2G099467
 Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865   AT5G24530 (TAIR) Reference: September 24th, 2018
Gene Product: August 15th, 2015
Variation: August 14th, 2015
Gene Model: August 14th, 2015
7 months agoremo1 remorin1:
 
 GRMZM2G107774
 Jamann, TM et al. 2016. Theor Appl Genet 129:591-602     Reference: February 29th, 2016
Gene Product: September 24th, 2018
Variation: February 6th, 2016
Gene Model: February 6th, 2016
7 months agougt1 UDP-glucosyl transferase1:
 
 GRMZM2G162755
 Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: September 24th, 2018
Gene Model: May 6th, 2016
7 months agofns1 flavone synthase1:
 
 GRMZM2G167336
 Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: September 20th, 2017
Gene Model: May 6th, 2016
7 months agocgt1 C-glucosyl transferase1:
 
 GRMZM2G162783
 Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: September 24th, 2018
Gene Model: September 24th, 2018
7 months agoglk58 G2-like-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
6.06
 GRMZM2G117854
 Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 25th, 2007
Gene Model: February 2nd, 2018
7 months agocchh7 Cys2His2 Zinc Finger7:
7.01
 GRMZM2G144645
 Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: April 4th, 2017
Gene Model: September 24th, 2018
7 months agoohp3 opaque2 heterodimerizing protein3:
8.05
 GRMZM2G143469
 Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: August 21st, 2018
Gene Model: September 24th, 2018
7 months agobnlg1031  : similar to Arabidopsis 4,5-DOPA dioxygenase extradiol-like protein
8.06
 GRMZM2G092817
     Variation: September 1st, 2003
Gene Model: September 23rd, 2018
7 months agoumc2356  :
8.06
 GRMZM2G054341
     Variation: September 23rd, 2018
Gene Model: September 23rd, 2018
7 months agoAY109883  :
8.06
 GRMZM2G312365
     Variation: July 29th, 2004
Gene Model: September 23rd, 2018
7 months agopgd3 phosphogluconate dehydrogenase3: single copy cDNA, csu843, similar to alfalfa enzyme; pentose phosphate pathway
4.03
 GRMZM2G440208
 Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 1st, 2003
Variation: February 28th, 2013
Gene Model: July 28th, 2016
7 months agosod4 superoxide dismutase4: electrophoretic mobility; cytosolic; Cu-Zn dimeric; intralocus hybrid bands occur; two similar sequences X17564 (sod4), X17565(sod4A)
1.04
    Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: February 12th, 2007
Variation: April 20th, 2005
7 months agompk7 MAP kinase7:
 
 GRMZM2G002100
 Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
7 months agoupb1 upbeat1: transcription factor with a bHLH domain; transcriptional regulation affected by nitrate
 
 GRMZM2G040364
 Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839   AT2G47270 (TAIR) Reference: September 22nd, 2018
Gene Product: September 14th, 2016
Gene Model: September 22nd, 2018
7 months agomkk2 mitogen-activated protein kinase kinase2:
 
 GRMZM2G400470
 Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839   AT4G29810 (TAIR) Reference: September 22nd, 2018
Gene Product: July 12th, 2013
Gene Model: September 22nd, 2018
7 months agoprx112 peroxidase112:
 
 GRMZM2G033985
 Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
7 months agoprx39 peroxidase39:
 
 GRMZM2G085967
 Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
7 months agoprx64 peroxidase64:
 
 GRMZM2G076562
 Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
7 months agopgd4 phosphogluconate dehydrogenase4:
10.04
 GRMZM2G177077
 Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 1st, 2003
Gene Model: September 22nd, 2018
8 months agobnlg1651  :
8.05
 GRMZM2G020544
     Variation: September 1st, 2003
Gene Model: September 20th, 2018
8 months agodof5 C2C2-Dof-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
 GRMZM5G880268
 Chen, Y; Cao, J. 2014. Plant Mol Biol Rep pp.doi: 10.1007/s11105-014-0835-9     Reference: November 26th, 2014
Variation: September 20th, 2018
Gene Model: September 20th, 2018
8 months agoereb117 AP2-EREBP-transcription factor 117: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
 GRMZM2G113078
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 20th, 2018
8 months agommt1 methionine S-methyltransferase1:
8.05
 GRMZM2G098031
 Bourgis, F. 1999. Plant Cell. 11:1485-1498     Reference: July 19th, 2004
Variation: September 20th, 2018
Gene Model: September 20th, 2018
8 months agobnlg1176a  :
8.05
 GRMZM2G375222
     Variation: September 1st, 2003
Gene Model: September 19th, 2018
8 months agoumc1263  : similar to Arabidopsis BRCT domain-containing DNA repair protein
8.05
 GRMZM2G372200
     Variation: September 1st, 2003
Gene Model: September 19th, 2018
8 months agoiaa38 Aux/IAA-transcription factor 38: similar to Arabidopsis auxin-responsive protein IAA27Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
 GRMZM2G035465
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 19th, 2018
8 months agosweet3a sugars will eventually be exported transporter3a:
8.04
 GRMZM2G179679
 Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: September 19th, 2018
8 months agoumc1959  :
8.05
 GRMZM2G090963
     Variation: September 1st, 2003
Gene Model: September 19th, 2018
8 months agoumc1562  :
8.05
 GRMZM2G059693
     Variation: September 19th, 2018
Gene Model: September 19th, 2018
8 months agocadtfr15 CCAAT-DR1-transcription factor 15: cDNA 5C05F12 similar to binding protein; single copyLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
 GRMZM2G064426
 Zhang, Z et al. 2016. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2016.08.020     Reference: August 8th, 2016
Gene Product: August 9th, 2016
Variation: September 1st, 2003
Gene Model: September 19th, 2018
8 months agoAY110056  : Protein trichome birefringence-like 25
8.04 - 8.04
 GRMZM2G131152
     Variation: September 25th, 2007
Gene Model: September 19th, 2018
8 months agoras7B2 ras-related protein7B2:
 
 GRMZM5G811797
 Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 19th, 2018
8 months agorps28 ribosomal protein S28: cDNA; SSR umc1741
 
 GRMZM2G030293
 Chevalier, C et al. 1996. Plant Sci 117:95-105     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 19th, 2018
Gene Model: September 18th, 2018
8 months agophi121  :
8.03
 GRMZM2G136567
 Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 18th, 2018
8 months agopro1 proline responding1: (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
8.04
 GRMZM2G375504
 Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: March 19th, 2015
Variation: September 18th, 2018
Gene Model: June 22nd, 2014
8 months agobnlg1863  :
8.03
 GRMZM2G022768
     Variation: September 1st, 2003
Gene Model: September 18th, 2018
8 months agobnlg2082  :
8.03
 GRMZM5G842965
     Variation: September 1st, 2003
Gene Model: September 18th, 2018
8 months agoumc1157  :
8.03
 GRMZM2G058913
     Variation: September 1st, 2003
Gene Model: September 18th, 2018
8 months agoumc1415  :
8.03
 GRMZM2G063676
     Variation: September 1st, 2003
Gene Model: September 18th, 2018
8 months agoumc1470  :
8.03
 GRMZM2G145573
     Variation: September 1st, 2003
Gene Model: September 18th, 2018
8 months agoumc1735  :
8.03
 GRMZM2G164090
 Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: September 18th, 2018
8 months agockx10 cytokinin oxidase10: Mapped the minor band to this site.
1.07
 GRMZM2G348452
 Smehilova, M; et al. 2009. J Exp Bot. 60:2701-12     Reference: March 25th, 2014
Gene Product: April 4th, 2014
Variation: September 1st, 2003
Gene Model: September 18th, 2018
8 months agoumc120a  :
8.03
 GRMZM2G578572
 Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 18th, 2018
8 months agoAY110032  :
8.03
 GRMZM2G102745
     Variation: July 29th, 2004
Gene Model: September 18th, 2018
8 months agoAY110450  : BRCA1/BRCA2-containing complex subunit 3
8.03
 GRMZM2G152436
     Variation: July 29th, 2004
Gene Model: September 18th, 2018
8 months agompk3 MAP kinase3: transcript and protein activity upregulated by ABA and H2O2
1.03
 GRMZM2G017792
 Liu, JX et al. 2018. PLoS One 13:e0203612     Reference: September 18th, 2018
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013
8 months agobnlg2235  :
8.02
 AC196470.3_FG007
     Variation: September 1st, 2003
Gene Model: September 17th, 2018
8 months agocko5 cytokinin oxidase 5:
8.03
 GRMZM2G325612
 Gu, R et al. 2010. J Plant Growth Reg 29:428-440     Reference: March 28th, 2014
Gene Product: April 4th, 2014
Variation: September 1st, 2003
Gene Model: September 17th, 2018
8 months agoumc1817  :
8.01
 GRMZM2G049781
     Variation: September 1st, 2003
Gene Model: September 17th, 2018
8 months agoras7B1 ras-related protein7B1:
 
 GRMZM2G058366
 Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 17th, 2018
8 months agobhlh19 bHLH-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.01 - 8.02
 GRMZM2G066057
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 16th, 2018
8 months agoumc1304  :
8.02
 GRMZM2G133552
     Variation: September 1st, 2003
Gene Model: September 16th, 2018
8 months agodxr2 deoxy xylulose reductoisomerase2:
8.01
 GRMZM2G036290
 Owens, BF, et al. 2014. Genetics. 198:1699-1716     Reference: January 1st, 2015
Gene Product: December 10th, 2011
Gene Model: September 16th, 2018
8 months agorf4 restorer of fertility4: dominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6
8.01 - 8.01
    Liu, YM et al. 2018. BMC Plant Biology 18:190     Reference: September 14th, 2018
Variation: September 1st, 2003
8 months agoumc1139  : similar to Arabidopsis ubiquitin-activating enzyme E1 C
8.01
 GRMZM2G007915
     Variation: September 1st, 2003
Gene Model: September 14th, 2018
8 months agoumc1414  :
8.01
 GRMZM2G020148
     Variation: September 1st, 2003
Gene Model: September 14th, 2018
8 months agoumc1483  :
8.01
 GRMZM5G872442
     Variation: March 30th, 2007
Gene Model: September 14th, 2018
8 months agobnl13.05a  : B-A translocations indicate that the probe does not map to 4S, 8L, or 10L.
8.01
 GRMZM2G041308
 Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 14th, 2018
8 months agophi116  : similar to Arabidopsis Nuclear transport factor 2 (NTF2) family protein
7.06
 GRMZM2G056772
     Variation: September 1st, 2003
Gene Model: September 13th, 2018
8 months agoglk59 G2-like-transcription factor 59: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.05
 AC155434.2_FG005
 Xu, YJ et al. 2018. Plant Cell Rep pp.doi: 10.1007/s00299-018-2262-0     Reference: February 2nd, 2018
Variation: September 13th, 2018
Gene Model: February 2nd, 2018
8 months agoAY109703  :
7.06
 GRMZM2G386824
     Variation: September 25th, 2007
Gene Model: September 13th, 2018
8 months agopht5 phosphate transporter protein5:
 
 GRMZM2G041595
 Liu, F et al. 2016. Int J Mol Sci 17:903     Reference: June 16th, 2016
Gene Product: June 16th, 2016
Gene Model: September 13th, 2018
8 months agophi069  :
7.05
 GRMZM2G448739
 Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 12th, 2018
8 months agolls1 lethal leaf spot1: chlorotic-necrotic lesions resembling Helminthosporium carbonum infection
1.01
    Sindhu, A et al. 2018. PLoS One 13:e0201359     Reference: September 12th, 2018
Gene Product: November 5th, 2014
Variation: September 12th, 2018
8 months agoo7 opaque endosperm7: like o1; high lysine content
10.07
 GRMZM2G074759
 Yang, J et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00266     Reference: September 12th, 2018
Gene Product: December 20th, 2011
Variation: February 20th, 2012
Gene Model: December 16th, 2011
8 months agobnlg2259  :
7.04
 GRMZM2G037444
     Variation: September 1st, 2003
Gene Model: September 12th, 2018
8 months agoumc1029  :
7.04
 GRMZM2G023346
     Variation: September 1st, 2003
Gene Model: September 12th, 2018
8 months agoumc1295a  :
7.04
 GRMZM2G080567
     Variation: September 1st, 2003
Gene Model: September 12th, 2018
8 months agoumc1768  :
7.04
 GRMZM2G351469
 Baysdorfer, C. 1993. submission to dbEST, a nucleotide sequence database     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 12th, 2018
8 months agofdl1 fused leaves1: coleoptile-first or first-second leaves fused at epidermis, curly
7.04
 GRMZM2G056407
 La Rocca, N, et al. 2015. J Exp Bot. 0:doi:10.1093/jxb/erv278     Reference: June 23rd, 2015
Gene Product: September 1st, 2003
Variation: September 12th, 2018
Gene Model: September 12th, 2018
8 months agoocd1 oxalyl-CoA decarboxylase1: Mutants have an opaque phenotype and caused dramatic alterations in the metabolome in the endosperm
 
 GRMZM2G175171
 Yang, J et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00266     Reference: September 12th, 2018
Gene Product: September 12th, 2018
Variation: September 12th, 2018
Gene Model: September 12th, 2018
8 months agoIDP363  :
2.05
 GRMZM2G042981
     Variation: March 31st, 2005
Gene Model: September 12th, 2018
8 months agoumc1214  : similar to Arabidopsis nuclear transport factor 2 and RNA recognition motif domain-containing protein
7.04
 GRMZM2G167932
     Variation: September 11th, 2018
Gene Model: September 11th, 2018
8 months agobnlg1666  :
7.04
 GRMZM2G081949
     Variation: September 1st, 2003
Gene Model: September 11th, 2018
8 months agobnlg1805  :
7.03
 GRMZM2G167591
     Variation: September 1st, 2003
Gene Model: September 11th, 2018
8 months agoippi1 isopentenyl pyrophosphate isomerase1: similar to Arabidopsis Isopentenyl-diphosphate Delta-isomerase IIpart of multigene family encoding isopentenyl pyrophosphate isomerase
7.03
 GRMZM2G108285
 Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Variation: September 1st, 2003
Gene Model: September 11th, 2018
8 months agoumc1708  :
7.04
 GRMZM2G131228
     Variation: September 1st, 2003
Gene Model: September 11th, 2018
8 months agoumc2332  :
7.04
 GRMZM2G131243
     Variation: September 11th, 2018
Gene Model: September 11th, 2018
8 months agooec17 oxygen evolving complex, 17kDa homolog: leaf cDNA csu229 similar to plant oxygen evolving complex polypeptide
7.03
 GRMZM2G058070
 Ettinger, WF; Theg, SM. 1992. Plant Physiol 99:791-793     Reference: July 18th, 2012
Gene Product: September 1st, 2003
Variation: July 18th, 2012
Gene Model: September 11th, 2018
8 months agoc3h32 C3H-transcription factor32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
 GRMZM5G842019
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: July 29th, 2004
Gene Model: September 11th, 2018
8 months agopsei2 cystatin2: cDNA expressed in E. coli inhibits cysteine proteinases; sequence and gene product activity distinct from psei1
8.08
    Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: April 21st, 2008
Variation: January 15th, 2015
8 months agobx14 benzoxazinone synthesis14: encodes an O-methyltransferase that converts DIM2BOA-Glc to HDM2BOA-Glc.
2.05
 GRMZM2G127418
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Variation: June 20th, 2016
Gene Model: June 20th, 2016
8 months agotps10 terpene synthase10:
10.03
 GRMZM2G179092
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
8 months agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
 GRMZM2G015419
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: January 3rd, 2018
Variation: June 6th, 2014
Gene Model: October 29th, 2015
8 months agobnlg2271  :
7.03
 GRMZM2G313643
     Variation: September 1st, 2003
Gene Model: September 10th, 2018
8 months agopme1 pectin methylesterase1: pollen; cDNA and genomic sequences
10.04
 GRMZM2G125356
 Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012     Reference: February 13th, 2017
Gene Product: September 10th, 2018
Variation: October 8th, 2015
Gene Model: October 8th, 2015
8 months agoumc1112  :
7.03
 GRMZM2G139931
     Variation: September 1st, 2003
Gene Model: September 10th, 2018
8 months agoumc1134  :
7.03
 GRMZM2G105253
     Variation: September 1st, 2003
Gene Model: September 10th, 2018
8 months agoumc1324  :
7.03
 GRMZM2G108874
     Variation: September 1st, 2003
Gene Model: September 10th, 2018
8 months agoprp5 pathogenesis related protein5:
1.06
 GRMZM2G402631
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 25th, 2018
Variation: August 20th, 2011
Gene Model: October 30th, 2015
8 months agosci1 subtilisin-chymotrypsin inhibitor homolog1: cDNA from germinating embryo infected with Fusarium moniliforme; similar to subtilisin-chymotrypsin inhibitor
8.05
    Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: August 25th, 2015
8 months agorip2 ribosome-inactivating protein2: genomic sequence produces RIP protein in E. coli; cDNA, SSR umc1782
7.04
 GRMZM2G119705
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: November 21st, 2017
Gene Model: July 28th, 2016
8 months agoaos1 allene oxide synthase1: expression induction by herbivory and methyl jasmonate
9.06
 GRMZM2G067225
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: October 29th, 2015
8 months agoprp4 pathogenesis related protein4:
7.00
 GRMZM2G465226
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 25th, 2018
Variation: August 29th, 2011
Gene Model: November 20th, 2014
8 months agoras6A1 ras-related protein6A1:
 
 GRMZM2G075719
 Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 10th, 2018
8 months agotps2 terpene synthase2:
 
 GRMZM2G046615
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
8 months agobx10 benzoxazinone synthesis10:
 
 GRMZM2G311036
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
8 months agobx11 benzoxazinone synthesis11:
 
 GRMZM2G336824
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
8 months agopme2 pectin methylesterase2:
 
 GRMZM2G046618
 Hawkins, JS et al. 2014. Plant J 79:375-384     Reference: September 25th, 2015
Gene Product: September 10th, 2018
Gene Model: April 26th, 2014
8 months agocyp19 cytochrome P-450 19:
 
 GRMZM2G102079
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: September 26th, 2016
Gene Model: September 26th, 2016
8 months agoZm00001d048936  : candidate gene for ga1
 
 GRMZM2G119698
 Zhang, ZG et al. 2018. Nature communications p.3678     Reference: September 10th, 2018
Gene Product: September 10th, 2018
Gene Model: September 10th, 2018
8 months agotsah1 tryptophan synthase A homolog1: Homologous to tryptophan synthase alpha subunit but does occur as part of native tryptophan synthase. Localized in the cytosol (Kriechbaumer et al 2008). Function unknown.
1.11
 GRMZM2G046163
 Hu, LF et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13443     Reference: September 10th, 2018
Gene Product: October 14th, 2011
Variation: August 15th, 2014
Gene Model: September 10th, 2018
8 months agomyb152 MYB-transcription factor 152:
7.03
 GRMZM2G104551
 Agarwal, T et al. 2016. Sci. Rep. 6:28502     Reference: June 23rd, 2016
Variation: September 1st, 2003
Gene Model: September 9th, 2018
8 months agodek1 defective kernel1: germless; colorless (mosaic) aleurone; floury white endosperm; anthocyanins and carotenoids absent; cultured embryos not obtained (aka clf1, gay1)
1.03
    Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499     Reference: September 8th, 2018
Gene Product: September 1st, 2003
Variation: September 8th, 2018
8 months agobzip7 bZIP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
 GRMZM2G006578
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 8th, 2018
Gene Model: September 8th, 2018
8 months agoumc1450  :
7.03
 GRMZM2G181371
     Variation: September 1st, 2003
Gene Model: September 8th, 2018
8 months agonpi394  :
7.03
 GRMZM2G043254
 Stuber, CW et al. 1992. Genetics 132:823-839     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 8th, 2018
8 months agonod1 narrow odd dwarf1: mutants are small plants with narrow leaves
 
 GRMZM2G027821
 Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499   AT4G35920 (TAIR)
LOC_Os03g06120 (MSU/TIGR) 		Reference: September 8th, 2018
Gene Product: March 4th, 2017
Variation: September 8th, 2018
Gene Model: March 4th, 2017
8 months agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
 GRMZM2G044481
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
8 months agotps23 terpene synthase23: part of defense response to herbivory by western maize rootworm and Spodoptera littoralis but not expressed highly in most North American maize
10.03
 GRMZM2G127336
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: July 21st, 2008
Variation: November 21st, 2017
Gene Model: August 22nd, 2012
8 months agotps4 terpene synthase4: gene product raised in E. coli forms same mixture of sesquiterpene olefins as tsp5 but with quantitative differences.
10.03
 GRMZM2G117319
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
8 months agotps5 terpene synthase5:
10.03
 GRMZM2G074309
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 26th, 2012
8 months agotps26 terpene synthase26: orthologous to stc1 but function in insect herbivory not clear
6.04
 GRMZM2G030583
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 5th, 2008
Variation: September 5th, 2008
Gene Model: August 22nd, 2012
8 months agoumc1713  :
7.03
 AC208031.3_FG002
     Variation: September 1st, 2003
Gene Model: September 7th, 2018
8 months agoparp1 poly(ADP-ribose) polymerase1:
8.03
 GRMZM2G124718
 Muli, JK et al. 2018. Plant 6:8-15     Reference: April 28th, 2018
Gene Product: September 7th, 2018
Variation: August 19th, 2010
Gene Model: August 7th, 2014
8 months agoparp2 poly(ADP-ribose) polymerase2:
2.06
 GRMZM5G831712
 Muli, JK et al. 2018. Plant 6:8-15     Reference: April 28th, 2018
Gene Product: September 7th, 2018
Variation: August 19th, 2010
Gene Model: July 28th, 2016
8 months agotps8 terpene synthase8:
1.04 - 1.04
 GRMZM2G038153
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Variation: May 29th, 2012
Gene Model: May 28th, 2012
8 months agotps1 terpene synthase1: possible plant defense gene
2.02
 GRMZM2G049538
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: May 28th, 2012
Variation: August 6th, 2013
Gene Model: May 28th, 2012
8 months agotps7 terpene synthase7:
 
 AC217050.4_FG007
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: July 17th, 2016
Variation: May 28th, 2012
Gene Model: June 8th, 2012
8 months agoks1 kaurene synthase1:
 
 GRMZM2G016922
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
8 months agoks4 kaurene synthase4:
 
 AC214360.3_FG001
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
8 months agoyg3 yellow-green3: Dominant yellow green mutant; homozygous viable
 
 GRMZM2G165521
 Sorgini, CA. 2018. Utilizing maize genomics for pre-breeding insights     Reference: September 7th, 2018
Variation: September 7th, 2018
Gene Model: September 7th, 2018
8 months agoks6 kaurene synthase6:
 
 GRMZM2G391312
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: December 2nd, 2015
8 months agotps17 terpene synthase17:
 
 GRMZM2G010356
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Variation: July 17th, 2016
Gene Model: July 17th, 2016
8 months agocyp20 cytochrome P-450 20:
 
 GRMZM2G139467
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 26th, 2016
Gene Model: September 26th, 2016
8 months agotps21 terpene synthase21: has a role in fungal tolerance; involved in the producation of beta-selinene and beta-costic acid
 
 GRMZM2G011151
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: May 28th, 2012
Gene Model: September 22nd, 2017
8 months agosro5 similar to RCD one5: over-expression in transgenic Arabidopsis enhances abiotic stress resistance
 
 GRMZM2G145236
 Jiang, HH et al. 2018. Acta Physiol Plant 40:176   AT1G32230 (TAIR) Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
8 months agosro3 similar to RCD one3:
 
 GRMZM2G011469
 Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
8 months agosro1 similar to RCD one1:
 
 GRMZM2G122543
 Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
8 months agosro6 similar to RCD one6:
 
 GRMZM2G177878
 Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Gene Model: August 10th, 2018
8 months agosro4 similar to RCD one4:
5.00
    Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Variation: September 25th, 2007
8 months agotps6 terpene synthase6:
10.03
 GRMZM2G127087
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: September 3rd, 2008
Variation: May 28th, 2012
Gene Model: May 28th, 2012
8 months agoks3 kaurene synthase3: functionality inferred from expression data and sequence similarity (Song et al 2011; Nelissen et al 2012)
2.02
 GRMZM2G093603
 Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: August 16th, 2012
Gene Model: August 15th, 2012
8 months agobnlg1792  :
7.02
 GRMZM2G024615
     Variation: September 1st, 2003
Gene Model: September 6th, 2018
8 months agophd30 PHD-transcription factor 30: similar to Arabidopsis PHD finger and bromo-adjacent homology domain-containing proteinLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
 GRMZM2G091265
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 6th, 2018
8 months agoereb102 AP2-EREBP-transcription factor 102: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
 GRMZM2G052667
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 6th, 2018
8 months agoumc1787  :
7.02
 GRMZM2G121189
     Variation: September 1st, 2003
Gene Model: September 6th, 2018
8 months agoAY109809  :
7.02
 GRMZM2G035451
     Variation: July 29th, 2004
Gene Model: September 6th, 2018
8 months agoAY109968  :
7.02
 GRMZM2G450488
     Variation: September 25th, 2007
Gene Model: September 6th, 2018
8 months agoras11C2 ras-related protein11C2: similar to Arabidopsis RAB GTPase homolog A1F
 
 GRMZM2G124732
 Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 22nd, 2011
Gene Model: September 6th, 2018
8 months agommc0162  :
7.02
 AC235546.1_FG001
     Variation: September 1st, 2003
Gene Model: September 5th, 2018
8 months agohtn1 Helminthosporium turcicum resistanceN1: formerly HtN; dominant Htn1 plants resistant to Exserohilum turcicum
8.06
 GRMZM2G164612
 Yang, P et al. 2018. New Phytol pp.doi: 10.1111/nph.15419   At1g66980 (TAIR)
LOC_Os01g49580 (MSU/TIGR) 		Reference: September 5th, 2018
Gene Product: July 1st, 2015
Variation: July 14th, 2015
Gene Model: July 1st, 2015
8 months agoembp1 EM binding protein1 homologue: bZIP protein binds to O2 box; wheat EM orthologue
7.02
 GRMZM2G095078
 Busk, P and Pages, M. 1997. Protein binding to the abscisic acid-responsive element is independent of VIVIPAROUS1 in vivo. Plant Cell 9:2261-2270     Reference: September 1st, 2003
Gene Product: August 21st, 2018
Variation: September 5th, 2018
Gene Model: September 5th, 2018
8 months agoAY110473  :
7.02
 GRMZM2G061562
     Variation: September 25th, 2007
Gene Model: September 5th, 2018
8 months agoAY110576  :
7.02
 GRMZM2G032699
     Variation: July 29th, 2004
Gene Model: September 5th, 2018
8 months agopco103663  :
7.02
 GRMZM2G125516
     Variation: September 25th, 2007
Gene Model: September 5th, 2018
8 months agocsu582  : similar to Arabidopsis Pyridoxal biosynthesis protein PDX1.3
7.00
 GRMZM2G120652
     Variation: September 1st, 2003
Gene Model: September 4th, 2018
8 months agofnr2 ferredoxin NADP reductase2:
7.01
 GRMZM2G011858
     Variation: October 9th, 2009
Gene Model: September 4th, 2018
8 months agoumc1426  :
7.00
 GRMZM2G006071
     Variation: September 1st, 2003
Gene Model: September 4th, 2018
8 months agoumc1672  :
7.00
 GRMZM2G044060
     Variation: September 1st, 2003
Gene Model: September 4th, 2018
8 months agommp18  :
7.01
 GRMZM2G066290
     Variation: September 4th, 2018
Gene Model: September 4th, 2018
8 months agoAW308691  :
7.01
 GRMZM2G542497
     Variation: July 29th, 2004
Gene Model: September 4th, 2018
8 months agomeg2 maternally expressed gene2: Maternally transmitted alleles preferentially expressed in endosperm
7.01
 GRMZM2G094054
 Xiong, Y et al. 2014. BMC Plant Biology 14:204     Reference: August 29th, 2014
Variation: August 29th, 2014
Gene Model: September 4th, 2018
8 months agomeg4 maternally expressed gene4: Maternally transmitted alleles preferentially expressed in endosperm
7.02
 GRMZM2G137959
 Han, ZX et al. 2018. Genetics 209:983-995     Reference: July 31st, 2018
Variation: October 25th, 2009
Gene Model: September 4th, 2018
8 months agoalt7 alanine aminotransferase7: bundle sheath alanine transasminase; see also alt8, alt9
7.00
 GRMZM2G120563
 Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: August 22nd, 2014
Gene Model: September 4th, 2018
8 months agophp20719a  :
10.04
 GRMZM2G139797
 Jia, SG et al. 2016. G3 6:2385-2395     Reference: August 10th, 2016
Variation: September 3rd, 2018
Gene Model: September 2nd, 2018
8 months agonpi105a  : Mapped major band to this site.
10.03
 GRMZM2G143356
 Caffrey, JJ et al. 1995. MNL 69:3-4     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
8 months agonpi114a  : Mapped major band to this site. npi114B was called npi202 but is listed as npi114B in the database.
8.01
 GRMZM2G140885
 Stuber, CW et al. 1992. Genetics 132:823-839     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
8 months agonpi264  :
10.04
 GRMZM2G424348
 Cowen, N et al. 1992. Theor Appl Genet 84:720-724     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
8 months agonpi352  :
7.04
 GRMZM5G860235
     Variation: September 2nd, 2018
Gene Model: September 1st, 2018
8 months agophp06005  :
10.03
 GRMZM2G571844
 Matz, EC et al. 1992. MNL 66:107     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
8 months agobhlh86 bHLH-transcription factor 86: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
 GRMZM5G818643
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
8 months agoemp108 empty pericarp108: essential for kernel development; required for splicing of multiple introns and complex I biogenesis
 
 GRMZM2G388778
 Sun, F et al. 2018. Plant J pp.doi: 10.1111/tpj.14030   AT5G18390 (TAIR)
LOC_Os08g41380 (MSU/TIGR) 		Reference: July 13th, 2018
Gene Product: December 27th, 2016
Variation: September 1st, 2018
Gene Model: July 13th, 2018
8 months agoemp18 empty pericarp18: mutants have an embryo-lethal phenotype; functions in mitochondrial atp6 and cox2 transcript editing
 
 GRMZM2G471348
 Li, X-L et al. 2018. New Phytol pp.doi: 10.1111/nph.15425     Reference: September 1st, 2018
Gene Product: December 27th, 2016
Variation: September 1st, 2018
Gene Model: September 1st, 2018
8 months agocry2 cryptochrome2:
2.04
 GRMZM2G049549
 Coles, N et al. 2010. Genetics 184:799-812     Reference: April 1st, 2010
Gene Product: August 31st, 2018
Variation: September 5th, 2014
Gene Model: September 5th, 2014
8 months agocry4 cryptochrome4:
4.05
        Gene Product: August 31st, 2018
8 months agomch1 maize CRY1 homolog1: Homolog to yeast 40S ribosomal protein S14 gene family (cDNA probe)
 
 GRMZM5G805627
 Larkin, JC et al. 1989. Genes Dev 3:500-509     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: October 14th, 2010
Gene Model: August 31st, 2018
8 months agomybr17 MYB-related-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.09
 GRMZM2G071977
 Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: August 31st, 2018
8 months agosnrkII8 SnRK2 serine threonine protein kinase8: salt tolerance expressed in Arabidopsis host (Vilela 2013)
 
 GRMZM2G138861
 Wu, QQ et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12714     Reference: August 31st, 2018
Gene Product: April 14th, 2018
Variation: August 31st, 2018
Gene Model: February 11th, 2015
8 months agofkf1 flavin-binding kelch repeat f-box1: Involved in regulating the circadian clock and photoperiodic flowering
 
 GRMZM2G107945
 Li, B et al. 2018. Genome Res pp.doi: 10.1101/gr.229716.117     Reference: August 31st, 2018
Gene Product: July 25th, 2017
Gene Model: December 12th, 2017
8 months agocry3 cryptochrome3: a homolog of CRY2, encoding cryptochrome-2, a photoreceptor regulated by blue light and involved in floral initiation (Li et al., 2018)
 
 GRMZM2G172152
 Li, B et al. 2018. Genome Res pp.doi: 10.1101/gr.229716.117     Reference: August 31st, 2018
Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
8 months agocry1 cryptochrome1:
5.05
 GRMZM2G024739
     Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
8 months agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
    Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: September 1st, 2003
Variation: September 4th, 2013
8 months agocdo202a(mcf)  : similar to Arabidopsis adenine nucleotide transporter 1
6.07
 GRMZM2G067877
     Variation: August 30th, 2018
Gene Model: August 30th, 2018
8 months agobnlg1136a  :
6.07
 GRMZM5G847466
     Variation: September 1st, 2003
Gene Model: August 30th, 2018
8 months agoumc1127  :
6.08 - 6.08
 GRMZM2G412937
     Variation: September 1st, 2003
Gene Model: August 30th, 2018
8 months agoumc1653  :
6.07
 GRMZM2G438895
     Variation: September 1st, 2003
Gene Model: August 30th, 2018
8 months agonpi113b  : Mapped minor band to this site.
2.08
 GRMZM2G035985
     Variation: September 1st, 2003
Gene Model: August 30th, 2018
8 months agofnsii1 flavone synthase typeII1: Encodes a flavone synthase that is of the oxygen- and NADPH-dependent cytochrome P450 membrane-bound monooxygenase class
 
 GRMZM2G148441
 Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: August 14th, 2015
Gene Model: August 14th, 2015
8 months agoufgt3 UDP-flavone-glycosyltransferase3:
 
 GRMZM2G063550
 Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: August 30th, 2018
Gene Model: August 30th, 2018
8 months agotrh4 thioredoxin h homolog4:
 
 GRMZM2G066612
 Righini, S et al. 2018. Plant Cell Environ pp.doi: 10.1111/pce.13428     Reference: August 30th, 2018
Gene Product: September 1st, 2003
Gene Model: August 30th, 2018
8 months agobnlg1740  : similar to Arabidopsis Cytochrome b561/ferric reductase transmembrane protein family
6.07
 GRMZM2G023133
     Variation: September 1st, 2003
Gene Model: August 29th, 2018
8 months agoumc1296  : similar to Arabidopsis cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4
6.07
 GRMZM2G021406
     Variation: August 29th, 2018
Gene Model: August 29th, 2018
8 months agoumc1463  :
6.06
 GRMZM2G010357
     Variation: September 1st, 2003
Gene Model: August 29th, 2018
8 months agoumc1490  : similar to Araidopsis double-stranded DNA-binding-like protein
6.07
 GRMZM2G174741
     Variation: September 1st, 2003
Gene Model: August 29th, 2018
8 months agoumc62  : similar to Arabidopsis ribosomal protein L18ae-like protein
6.07
 GRMZM2G022453
 Rocheford, TR. 1994. Proc Annu Corn Sorghum Ind Res Conf 49:239-249     Reference: September 1st, 2003
Variation: August 29th, 2018
Gene Model: August 29th, 2018
8 months agoAY104289  :
6.07
 GRMZM2G085849
     Variation: September 25th, 2007
Gene Model: August 29th, 2018
8 months agoAY105785  :
6.06
 GRMZM2G176396
     Variation: March 21st, 2007
Gene Model: August 29th, 2018
8 months agoAY109797  : similar to Arabidopsis Ubiquitin-conjugating enzyme family protein
6.07
 GRMZM2G085849
     Variation: July 29th, 2004
Gene Model: August 29th, 2018
8 months agoAY110400  :
6.07
 GRMZM5G872417
     Variation: July 29th, 2004
Gene Model: August 29th, 2018
8 months agoras11C3 ras-related protein11C3:
 
 GRMZM2G020661
 Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 24th, 2011
Gene Model: August 29th, 2018
8 months agoIDP148  :
6.06
 GRMZM2G157596
     Variation: March 31st, 2005
Gene Model: August 29th, 2018
8 months agoapx5 Cytosolic ascorbate peroxidase5: leaf cDNA csu238, partial 5' sequence similar to plant ascorbate peroxidase
6.07
 GRMZM2G093346
 Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 10th, 2012
Gene Model: August 29th, 2018
8 months agoid1 indeterminate growth1: requires extended growth for flowering; vegetatively totipotent with gt1 and factors for perennialism
1.08
    Karl, JR. 2014. MNL 88:e14     Reference: August 28th, 2018
Gene Product: January 3rd, 2015
Variation: August 3rd, 2015
8 months agoubi7 ubiquitin-conjugating enzyme7:
6.05
 GRMZM2G012052
 van Nocker, S. 1998. Plant Physiol 116:1191     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 28th, 2018
8 months agolac2 laccase2:
6.05
 GRMZM2G146152
 Caparros-Ruiz, D et al. 2006. Plant Sci 171:217-225     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
8 months agoras8A2 ras-related protein8A2:
 
 GRMZM5G878008
 Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: August 28th, 2018
8 months agome5 malic enzyme5:
6.05
 GRMZM5G886257
 Alvarez, CE et al. 2013. Photosynth Res 115:65-80     Reference: August 21st, 2014
Gene Product: August 21st, 2014
Variation: August 16th, 2011
Gene Model: August 27th, 2018
8 months agoumc1352a  :
6.05
 GRMZM2G032896
     Variation: August 26th, 2018
Gene Model: August 27th, 2018
8 months agoumc1379  :
6.05
 GRMZM2G117439
     Variation: September 1st, 2003
Gene Model: August 27th, 2018
8 months agoumc1388  :
6.05
 GRMZM2G093325
     Variation: September 1st, 2003
Gene Model: August 27th, 2018
8 months agoumc1413  :
6.05
 GRMZM2G030123
     Variation: September 1st, 2003
Gene Model: August 27th, 2018
8 months agonpi252  : similar to Arabidopsis carbon catabolite repressor protein 4-like 4
6.05
 GRMZM2G054056
 Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 27th, 2018
8 months agotor1 target of rapamycin1: similar to Arabidpsis FKBP12-rapamycin complex-associated proteinexpression is highly regulated during germination
6.05
 GRMZM2G049342
 Garcia, NS; Messing, J. 2017. Frontiers Plant Sci 8:1723     Reference: November 23rd, 2017
Gene Product: November 21st, 2017
Gene Model: August 27th, 2018
8 months agoAY110260  :
6.05
 GRMZM2G319109
     Variation: September 25th, 2007
Gene Model: August 27th, 2018
8 months agokrp9 kinesin-related protein9: Is a member of MCAK family and may depolymerize microtubules per C. Lawrence.
6.05
 GRMZM5G881464
 Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Variation: September 1st, 2003
Gene Model: August 26th, 2018
8 months agoumc1114  :
6.05
 GRMZM5G898274
     Variation: September 1st, 2003
Gene Model: August 26th, 2018
8 months agoumc1314  : similar to Arabidopsis Ras-related protein RABA2c
6.05
 GRMZM2G061912
     Variation: September 1st, 2003
Gene Model: August 26th, 2018
8 months agovpp1 vacuolar proton pump homolog1: glucose-starved root tip cDNA closely similar to Oryza gene (TIGR match)
6.04
 GRMZM2G148200
 Wisniewski, J; Rogowsky, P. 2004. Plant Mol Biol. 56:325-337     Reference: July 28th, 2005
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2018
8 months agoumc1796  :
6.04
 GRMZM2G064382
     Variation: September 1st, 2003
Gene Model: August 25th, 2018
8 months agopip1b plasma membrane intrinsic protein1:
5.06
    Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: September 1st, 2003
Variation: April 26th, 2016
8 months agocipk8 calcineurin B-like-interacting protein kinase8:
 
 GRMZM2G383240
 Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469     Reference: June 5th, 2017
Gene Product: August 25th, 2018
Variation: June 2nd, 2017
Gene Model: June 2nd, 2017
8 months agovpp8 vacuolar proton pump8: low copy leaf cDNA csu37, similar to yeast ATPase subunit
7.04
 GRMZM2G019999
 Couee, I and Chevalier, C. 1996. Nucleotide submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
8 months agoglp1 germin-like protein1:
6.05
 GRMZM2G064096
 Fan, Z, et al. 2005. Biochem Biophys Res Commun. 331:1257-63     Reference: February 14th, 2006
Gene Product: December 24th, 2015
Variation: August 25th, 2018
Gene Model: August 24th, 2018
8 months agorte1 rotten ear1: mutants show distinct defects in vegetative and reproductive development, eventually causing widespread sterility in its tassel and ear.
1.05
 GRMZM2G166159
 Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: June 24th, 2017
Variation: July 21st, 2014
Gene Model: July 19th, 2014
8 months agorte3 rotten ear3: phylogenetically related to Class II clade boron transporters
 
 GRMZM2G051753
 Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
8 months agocul2 cullin2:
 
 GRMZM2G166694
 Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: May 10th, 2018
Gene Model: May 10th, 2018
8 months agonhx7 Na+/H+ antiporter 7: silicon up-regulates expression
 
 GRMZM2G098494
 Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018   AT1G14660 (TAIR) Reference: August 20th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
8 months agovpp7 vacuolar proton pump7: SNP; NCBI defines as a vacuolar proton pump-like protein
 
 GRMZM2G069095
 Wisniewski, J; Rogowsky, P. 2004. Plant Mol Biol. 56:325-337     Reference: July 28th, 2005
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
8 months agonhx8 Na+/H+ antiporter 8: Salt inducable
 
 GRMZM2G067747
 Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88   AT1G79610 (TAIR) Reference: August 25th, 2018
Gene Product: August 25th, 2018
Gene Model: August 25th, 2018
8 months agonhx5 Na+/H+ antiporter 5: shoot-specific and NaCl-specific expression.
7.05
 GRMZM2G027851
 Bosnic, P et al. 2018. Environ Exp Bot pp.doi: 10.1016/j.envexpbot.2018.08.018     Reference: August 20th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
8 months agonhx1 Na+/H+ antiporter 1: root-specific and NaCl-specific expression.
 
    Zorb, C; Schubert, S. 2005. J Plant Physiol. 162:55-66     Reference: January 29th, 2010
Gene Product: August 25th, 2018
8 months agonhx2 Na+/H+ antiporter 2: shoot- and root-specific and NaCl-specific expression; predominant isoform under control conditions(mM NaCl).
 
 GRMZM2G063492
 Huanca-Mamani, W et al. Plant Omics J. 2018. 11:80-88     Reference: August 25th, 2018
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
8 months agonhx4 Na+/H+ antiporter 4: shoot-specific expression.
 
    Zorb, C; Schubert, S. 2005. J Plant Physiol. 162:55-66     Reference: January 29th, 2010
Gene Product: August 25th, 2018
8 months agobnlg2191  :
6.02
 GRMZM2G047969
     Variation: September 1st, 2003
Gene Model: August 24th, 2018
8 months agoumc1105  :
6.04
 GRMZM2G041258
     Variation: September 1st, 2003
Gene Model: August 24th, 2018
8 months ago